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FFCP PHASE1:Mm9::chr18:9449945..9450041,-: Difference between revisions

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{{FFCP|EntrezGene=67974|HGNC=|MCL_coexpression_id=456|UniProt=Q8BGU5|association_with_transcript=106bp_to_ENSMUST00000053917,ENSMUST00000115867,NM_026484,uc008eai.1,uc012azd.1_5end|description=CAGE_peak_1_at_Ccny_5end|id=chr18:9449945..9450041,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!1.40e-08!122;UBERON:0000025!2.97e-08!114;UBERON:0002021!5.24e-08!10;UBERON:0000411!5.24e-08!10;UBERON:0001950!5.24e-08!10;UBERON:0002020!5.69e-08!34;UBERON:0007023!7.08e-08!51;UBERON:0001049!2.00e-07!52;UBERON:0005068!2.00e-07!52;UBERON:0006241!2.00e-07!52;UBERON:0007135!2.00e-07!52;UBERON:0000955!3.80e-07!50;UBERON:0006238!3.80e-07!50;UBERON:0001017!9.73e-07!73;UBERON:0005743!9.73e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.40e-08,122;UBERON:0000025,2.97e-08,114;UBERON:0000073,3.91e-08,54;UBERON:0002021,5.24e-08,10;UBERON:0000411,5.24e-08,10;UBERON:0001950,5.24e-08,10;UBERON:0002020,5.69e-08,34;UBERON:0007023,7.08e-08,51;UBERON:0001049,2.00e-07,52;UBERON:0005068,2.00e-07,52;UBERON:0006241,2.00e-07,52;UBERON:0007135,2.00e-07,52;UBERON:0002346,9.57e-07,64;UBERON:0003075,9.57e-07,64;UBERON:0007284,9.57e-07,64;UBERON:0001017,9.73e-07,73|phase1_expression=34.9124486688451,57.9299176681339,55.0549079661339,87.7146212789807,91.6639185801815,50.0280230297432,43.9191764319588,31.8934608900693,42.658982811955,34.407485369333,21.4022460281881,29.1168380332978,34.5825474461036,38.2901362595209,27.6481102307,22.6772299476605,16.7894850750755,21.4514272443602,25.5032846506674,20.7950929381035,65.823506576928,15.3900974361372,14.3659884026414,33.2784239410286,36.0172571275457,55.1262685550419,56.4298214968388,45.4644300967226,61.9476347427779,64.0156529590224,37.0289952794359,13.3356441426523,14.7615549020297,15.8481681015439,30.9071233133864,29.5897668738116,31.0337421518801,16.3227335987394,14.8453715459522,13.088093599345,11.7646297606203,19.8083190637949,19.4204141212461,24.6757763232131,25.3442328048786,27.7155595764139,28.9484797408774,39.6805784612413,30.9757517655605,48.024185071348,36.2564832009689,30.188038516644,21.1406083632748,44.247090662692,35.6259427091012,65.8584156252024,52.7221529487312,54.1455696891314,41.6771909370771,45.4932242173948,46.2696924559511,33.5456086748441,28.4574334755565,42.7452365708665,33.6214563272771,31.2611250576284,34.1544125990981,39.5744854481201,43.4459475572521,39.691745869517,37.6481680818974,59.1297537715873,63.3892712531131,37.359693760561,36.2295880448933,32.1726575313507,60.5637345496638,77.3785268796237,72.3486771636907,51.9631973656964,54.4351479434337,47.9240300912219,61.4202597803038,58.5273114432947,66.4672377829124,68.0592032444172,65.7757165291856,52.5646437227348,27.2614295999463,45.796365424712,51.5958789888986,56.7879758807715,60.5174486999898,72.3202276794675,70.8256295017959,66.3079792904057,61.5146560177073,46.3570477412317,46.2419088193106,42.0474093667305,35.4925417837235,48.7640614174408,43.3168907501298,0,31.8241830286485,28.1229450677359,21.7375511356357,74.4478895768271,47.6445705910796,40.9700303818916,30.8803881643722,31.9688752227748,30.6718611350558,28.1851337833404,43.2726442259394,32.6733137457156,44.2478992244529,72.010479746116,51.3074120130927,64.3832062790689,49.2476586166678,31.5168914537894,39.1422698558057,62.3623097634595,57.1789509600732,51.8577822073441,25.4008063952551,22.7963037777495,28.2095904102204,70.5513911596715,103.852636839828,48.3769255634528,118.548186371133,124.533427719871,73.7647558186438,79.3359776401335,55.1969352068714,37.3220911830279,54.0826703048064,121.635392702382,35.3927604858554,35.1750219783214,42.6747247638678,34.9635177378859,45.3803449339357,45.6084844214065,41.5098639799599,50.9645640355861,27.377135102471,44.6290349196053,44.691585537643,46.2502995422183,43.3753708791933,41.4420078161378,34.3656167801266,34.0348596259623,27.3863143052162,19.3010930336036,23.3014069504386,37.6968906014613,41.9801647366162,37.0927846609691,44.7447550256047,39.5496105812282,43.3490587213533,38.3681008838173,45.069931435136,52.4276387228591,50.0261943736981,62.8761387422935,83.0955297845021,66.5209942785262,71.3537874695915,81.3290897687853,100.098015516525,55.8772045219514,57.1624494561971,64.7903888325684,34.5526965867079,42.9637842941811,45.4902138466989,36.504717956825,41.8070722428356,40.3278327358625,52.6727258314408,51.2213749191674,40.9676390344439,50.7339003704935,43.6719555146829,63.8161780144497,56.4120310172952,54.9629914182053,40.9682666058656,35.9882814720646,34.9393980586549,41.7485222082894,34.5235427158374,47.552085885636,53.0554546472519,53.7300938645752,53.3795674660674,54.7883407812794,81.2280198218788,19.6877224744991,25.5526693647164,25.1845565871036,27.3861163874479,23.6353616557368,26.2264627334862,31.3588789821384,36.804696477933,30.476316863877,74.7594673942244,59.5425516269605,63.3436476422558,63.3972983647251,60.0981335298406,72.8489717258684,59.6752804238133,39.982687883572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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:67974
|HGNC=
|MCL_coexpression_id=456
|TSSclassifier=NA
|UniProt=uniprot:Q8BGU5
|association_with_transcript=106bp_to_ENSMUST00000053917,ENSMUST00000115867,NM_026484,uc008eai.1,uc012azd.1_5end
|cluster_id=chr18:9449945..9450041,-
|description=CAGE_peak_1_at_Ccny_5end
|id=chr18:9449945..9450041,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!1.40e-08!122;UBERON:0000025!2.97e-08!114;UBERON:0002021!5.24e-08!10;UBERON:0000411!5.24e-08!10;UBERON:0001950!5.24e-08!10;UBERON:0002020!5.69e-08!34;UBERON:0007023!7.08e-08!51;UBERON:0001049!2.00e-07!52;UBERON:0005068!2.00e-07!52;UBERON:0006241!2.00e-07!52;UBERON:0007135!2.00e-07!52;UBERON:0000955!3.80e-07!50;UBERON:0006238!3.80e-07!50;UBERON:0001017!9.73e-07!73;UBERON:0005743!9.73e-07!73
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.40e-08,122;UBERON:0000025,2.97e-08,114;UBERON:0000073,3.91e-08,54;UBERON:0002021,5.24e-08,10;UBERON:0000411,5.24e-08,10;UBERON:0001950,5.24e-08,10;UBERON:0002020,5.69e-08,34;UBERON:0007023,7.08e-08,51;UBERON:0001049,2.00e-07,52;UBERON:0005068,2.00e-07,52;UBERON:0006241,2.00e-07,52;UBERON:0007135,2.00e-07,52;UBERON:0002346,9.57e-07,64;UBERON:0003075,9.57e-07,64;UBERON:0007284,9.57e-07,64;UBERON:0001017,9.73e-07,73
|phase1_expression=34.9124486688451,57.9299176681339,55.0549079661339,87.7146212789807,91.6639185801815,50.0280230297432,43.9191764319588,31.8934608900693,42.658982811955,34.407485369333,21.4022460281881,29.1168380332978,34.5825474461036,38.2901362595209,27.6481102307,22.6772299476605,16.7894850750755,21.4514272443602,25.5032846506674,20.7950929381035,65.823506576928,15.3900974361372,14.3659884026414,33.2784239410286,36.0172571275457,55.1262685550419,56.4298214968388,45.4644300967226,61.9476347427779,64.0156529590224,37.0289952794359,13.3356441426523,14.7615549020297,15.8481681015439,30.9071233133864,29.5897668738116,31.0337421518801,16.3227335987394,14.8453715459522,13.088093599345,11.7646297606203,19.8083190637949,19.4204141212461,24.6757763232131,25.3442328048786,27.7155595764139,28.9484797408774,39.6805784612413,30.9757517655605,48.024185071348,36.2564832009689,30.188038516644,21.1406083632748,44.247090662692,35.6259427091012,65.8584156252024,52.7221529487312,54.1455696891314,41.6771909370771,45.4932242173948,46.2696924559511,33.5456086748441,28.4574334755565,42.7452365708665,33.6214563272771,31.2611250576284,34.1544125990981,39.5744854481201,43.4459475572521,39.691745869517,37.6481680818974,59.1297537715873,63.3892712531131,37.359693760561,36.2295880448933,32.1726575313507,60.5637345496638,77.3785268796237,72.3486771636907,51.9631973656964,54.4351479434337,47.9240300912219,61.4202597803038,58.5273114432947,66.4672377829124,68.0592032444172,65.7757165291856,52.5646437227348,27.2614295999463,45.796365424712,51.5958789888986,56.7879758807715,60.5174486999898,72.3202276794675,70.8256295017959,66.3079792904057,61.5146560177073,46.3570477412317,46.2419088193106,42.0474093667305,35.4925417837235,48.7640614174408,43.3168907501298,0,31.8241830286485,28.1229450677359,21.7375511356357,74.4478895768271,47.6445705910796,40.9700303818916,30.8803881643722,31.9688752227748,30.6718611350558,28.1851337833404,43.2726442259394,32.6733137457156,44.2478992244529,72.010479746116,51.3074120130927,64.3832062790689,49.2476586166678,31.5168914537894,39.1422698558057,62.3623097634595,57.1789509600732,51.8577822073441,25.4008063952551,22.7963037777495,28.2095904102204,70.5513911596715,103.852636839828,48.3769255634528,118.548186371133,124.533427719871,73.7647558186438,79.3359776401335,55.1969352068714,37.3220911830279,54.0826703048064,121.635392702382,35.3927604858554,35.1750219783214,42.6747247638678,34.9635177378859,45.3803449339357,45.6084844214065,41.5098639799599,50.9645640355861,27.377135102471,44.6290349196053,44.691585537643,46.2502995422183,43.3753708791933,41.4420078161378,34.3656167801266,34.0348596259623,27.3863143052162,19.3010930336036,23.3014069504386,37.6968906014613,41.9801647366162,37.0927846609691,44.7447550256047,39.5496105812282,43.3490587213533,38.3681008838173,45.069931435136,52.4276387228591,50.0261943736981,62.8761387422935,83.0955297845021,66.5209942785262,71.3537874695915,81.3290897687853,100.098015516525,55.8772045219514,57.1624494561971,64.7903888325684,34.5526965867079,42.9637842941811,45.4902138466989,36.504717956825,41.8070722428356,40.3278327358625,52.6727258314408,51.2213749191674,40.9676390344439,50.7339003704935,43.6719555146829,63.8161780144497,56.4120310172952,54.9629914182053,40.9682666058656,35.9882814720646,34.9393980586549,41.7485222082894,34.5235427158374,47.552085885636,53.0554546472519,53.7300938645752,53.3795674660674,54.7883407812794,81.2280198218788,19.6877224744991,25.5526693647164,25.1845565871036,27.3861163874479,23.6353616557368,26.2264627334862,31.3588789821384,36.804696477933,30.476316863877,74.7594673942244,59.5425516269605,63.3436476422558,63.3972983647251,60.0981335298406,72.8489717258684,59.6752804238133,39.9826878835723,43.5116487100209,30.2146252679835,41.3054836987764,44.0541457071975,46.4185099727727,59.3206289487708,54.6993950048483,54.4803136535986,49.9093425897935,42.4405985113761,44.0346703758034,51.9290120307627,70.871903451458,58.7418138524206,48.1928987558655,49.1167408422424,61.0092241953609,51.5731421005694,30.9837046761917,76.7511618701294,43.5401342794434,53.0996692243428,52.5633090468029,42.2974772376017,40.9949560311605,45.575321457002,44.1243664825635,46.7609372658099,45.8533822417967,86.1141128010443,44.8530669258129,36.1473175444528,57.3362096924588,46.521574678255,79.6470830039777,22.5785991624133,29.0230614686161,39.6070667487386,39.2751517531428,55.030891481963,49.8766605814667,47.6229185615532,36.3627325952416,60.6790575236767,66.4137234022492,77.3516574361401,44.5975883537462,33.4913634898237,32.2103122619059,39.6523514808446,53.0247298590398,38.7060334196493,36.8589806148751,33.4911444026059,50.219745525634,65.4561098969204,54.9115711156855,42.2108807530189,50.2154367024266,42.7015508491343,32.7080222568594,35.1261525454431,53.9239547765224,73.0575689921408,31.9528547091985,29.3069352507776,27.7791791054568,26.9366893516708,29.5259531877414,27.4533807847827,30.0861821089124,31.489076772823,29.5747943941467,49.6428721367859,41.2818471623382,37.4107819513402,35.4257517895508,37.8449815786188,31.2258466157034,43.2914551895274,49.9226872581029,40.5721710075246,52.6236791564679,52.8138416123887,113.865973614206,31.5479912152795,30.1134452631918,38.8902376688095,32.5482755163882,34.6360057256095,41.7791769578884,47.2641916983539,51.6956568018755,74.4079092144099,76.9040116708501,29.0730230977924,21.6915980360476,20.234058561471,20.7873316764472,19.8719632190904,24.8351693476581,19.111076473675,21.4149814403137,18.9816925902518,19.889976536955,20.5685417679155,22.4153125701431,21.1666051608725,24.8947801646742,47.6133805591944,16.8709324564289,14.9822140537824,19.4746154982331,61.0479117141722,51.612680749075,41.2091154601346,37.5144663388365,63.6996572124911,135.540442228096,121.525862437895,119.162266795395,112.220128070428,107.557955603991,114.819872403234,112.728757538712,101.772591928674,125.520447288625,105.623103597371,37.0520830875511,50.6761589219309,46.0980735536162,45.460956091771,58.2724592105791,56.4399570941543,52.6724744889828,47.1820281077068,55.1981040497922,45.9908925410111,54.4980494764015,49.2314751017659,47.4762442872304,54.4854046965438,54.506260038877,65.2522357057811,53.4226742605784,54.2074909503011,47.3898785923803,49.6060360852919,42.8586565481769,51.8229353985265,53.8865789280945,50.871245821315,47.9957840118186,50.9379939507893,47.0124890283025,48.4048269045631,46.7166151629765,51.0639467208542,51.3689628477674,49.0552322230306,54.4277287415687,55.0025786210179,51.891878353927,47.7138203861477,46.3184584721909,53.9326345661229,60.6384012658234,58.8979089049106,71.1834255354694
|short_description=p1@Ccny
}}

Revision as of 05:41, 6 August 2015

Short description:p1@Ccny
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ccny_5end
Coexpression cluster:MCL_coexpression_mm9:456
Association with transcript: 106bp_to_ENSMUST00000053917, ENSMUST00000115867, NM_026484, uc008eai.1, uc012azd.1_5end
EntrezGene:67974
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ccny

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G734.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I557.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I655.05
CD326+ enterocyte, pool1.CNhs13542.11848-124I387.71
CD326+ enterocyte, pool2.CNhs13197.11849-124I491.66
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I750.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I843.92
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E931.89
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E742.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F234.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E621.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F129.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E434.58
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E838.29
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A127.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A322.68
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A221.45
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A425.50
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A620.80
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A365.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H215.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I914.37
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D133.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D236.02
GP2+ M cell, pool1.CNhs13228.11845-124H955.13
GP2+ M cell, pool2.CNhs13231.11846-124I156.43
GP2+ M cell, pool3.CNhs13240.11847-124I245.46
Ileum epithelium, pool1.CNhs13199.10252-104B961.95
Ileum epithelium, pool2.CNhs13232.10253-104C164.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C837.03
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.34
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G614.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F530.91
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F629.59
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F731.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G816.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H313.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H219.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H419.42
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D824.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D925.34
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B327.72
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B728.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C239.68
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B830.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C348.02
Mouse Astrocytes, donor2.CNhs12078.11552-120C436.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C430.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A221.14
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I944.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A135.63
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C165.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E152.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C554.15
Mouse Granule cells, donor1.CNhs12131.11713-123C341.68
Mouse Granule cells, donor2.CNhs12357.11731-123E345.49
Mouse Granule cells, donor3.CNhs12108.11636-122C746.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C633.55
Mouse Meningeal cells, donor3.CNhs12109.11639-122D128.46
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C742.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E733.62
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D231.26
Mouse Microglia, donor1.CNhs12629.11718-123C834.15
Mouse Microglia, donor2.CNhs12634.11736-123E839.57
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D543.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F539.69
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D937.65
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F159.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D563.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D237.36
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F236.23
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D632.17
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D360.56
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F377.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D772.35
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D451.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F454.44
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D847.92
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E461.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E558.53
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I666.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D668.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F665.78
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E152.56
Mouse Schwann, donor1.CNhs12507.11728-123D927.26
Mouse Schwann, donor2.CNhs12573.11746-123F945.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G351.60
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F756.79
Mouse hepatocyte, donor1.CNhs13078.11714-123C460.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C872.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F470.83
Mouse hepatocyte, donor8.CNhs13091.11824-124F666.31
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A761.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I746.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E346.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I842.05
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G635.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H148.76
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I843.32
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G131.82
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G228.12
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G321.74
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B674.45
accessory axillary lymph node, adult.CNhs10475.1063-29H947.64
adrenal gland, adult.CNhs10508.49-24D740.97
adrenal gland, embryo E14.CNhs11038.406-44C530.88
adrenal gland, embryo E16.CNhs11004.1254-43D631.97
adrenal gland, embryo E17.CNhs11043.1263-45I130.67
adrenal gland, embryo E18.CNhs11026.1262-18F528.19
adrenal gland, neonate N00.CNhs11191.1311-23C143.27
adrenal gland, neonate N25.CNhs11223.1377-27I332.67
amnion, adult pregnant day17.5.CNhs10488.583-22A844.25
aorta, adult.CNhs10498.46-23H172.01
bone (os femoris), adult.CNhs10483.56-12G251.31
bone (os femoris), neonate N02.CNhs11227.1985-43F564.38
bone (os femoris), neonate N16.CNhs11225.1525-43A649.25
bone (os femoris), neonate N20.CNhs11195.1350-25C331.52
cecum, adult.CNhs10467.37-13H439.14
cerebellum, adult.CNhs10494.15-8B262.36
cerebellum, neonate N30.CNhs11135.1395-42I257.18
colon, adult.CNhs10468.36-18H751.86
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D122.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D428.21
corpora quadrigemina, adult.CNhs10501.16-22A470.55
corpus striatum, adult.CNhs10487.19-21D8103.85
corpus striatum, neonate N00.CNhs11226.630-43F148.38
cortex, adult.CNhs10473.12-14D5118.55
cortex, neonate N30.CNhs11107.1392-42F2124.53
diencephalon, adult.CNhs10482.20-12F273.76
diencephalon, neonate N30.CNhs11201.1388-42B279.34
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B155.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A237.32
epididymis, adult.CNhs10490.58-23B254.08
eyeball, adult.CNhs10484.31-12G4121.64
eyeball, embryo E12.CNhs11016.345-16C635.39
eyeball, embryo E14.CNhs10521.399-16E235.18
eyeball, embryo E15.CNhs10593.426-16C942.67
eyeball, embryo E17.CNhs11023.1261-18D434.96
eyeball, neonate N00.CNhs11207.633-15C645.38
eyeball, neonate N01.CNhs11140.1532-43E745.61
eyeball, neonate N02.CNhs11205.1551-44G841.51
eyeball, neonate N16.CNhs11188.777-19A250.96
forelimb, embryo E11.CNhs10596.335-25E227.38
forelimb, embryo E12.CNhs10600.359-14H244.63
forelimb, embryo E13.CNhs10589.384-1E244.69
forelimb, embryo E14.CNhs10577.413-26A846.25
forelimb, embryo E15.CNhs11007.437-20E743.38
forelimb, embryo E17.CNhs10598.1517-43C441.44
forelimb, embryo E18.CNhs11008.1520-43B534.37
gonad, embryo E13.CNhs11044.1564-45I634.03
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C827.39
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D219.30
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D523.30
heart, embryo E11.CNhs10586.331-24E937.70
heart, embryo E12.CNhs11015.353-12F541.98
heart, embryo E13.CNhs11013.376-3I937.09
heart, embryo E14.CNhs10597.403-26D444.74
heart, embryo E15.CNhs11017.431-16C839.55
heart, embryo E16.CNhs11021.457-17C643.35
heart, embryo E17.CNhs11025.479-18E538.37
heart, embryo E18.CNhs11030.1283-20G345.07
heart, neonate N00.CNhs11213.639-21E352.43
heart, neonate N03.CNhs11221.1349-25I250.03
heart, neonate N10.CNhs11118.749-24G162.88
heart, neonate N16.CNhs11209.782-15G183.10
heart, neonate N20.CNhs11127.821-26I666.52
heart, neonate N25.CNhs11196.1351-25D371.35
heart, neonate N30.CNhs11202.1390-42D281.33
hippocampus, adult.CNhs10478.13-16E8100.10
hippocampus, neonate N00.CNhs11228.627-43G155.88
intestinal mucosa, adult.CNhs10506.860-29I357.16
intestine, adult.CNhs10496.178-9A364.79
intestine, embryo E12.CNhs11019.1251-16I534.55
intestine, embryo E13.CNhs11010.381-16D542.96
intestine, embryo E15.CNhs10602.976-16D845.49
intestine, embryo E16.CNhs10585.463-22H436.50
intestine, embryo E17.CNhs10582.482-18D341.81
intestine, embryo E18.CNhs10526.1289-20F740.33
intestine, neonate N00.CNhs11126.644-26D152.67
intestine, neonate N01.CNhs11192.1322-23E951.22
intestine, neonate N06.CNhs11102.688-20B840.97
intestine, neonate N07.CNhs11095.720-20F250.73
intestine, neonate N10.CNhs11098.755-23A543.67
intestine, neonate N20.CNhs11187.827-18D163.82
intestine, neonate N25.CNhs11121.1352-25E356.41
intestine, neonate N30.CNhs11131.1384-42G154.96
kidney, embryo E14.CNhs10606.411-4I940.97
kidney, embryo E15.CNhs10997.434-16F835.99
kidney, embryo E16.CNhs10584.464-22A534.94
kidney, embryo E17.CNhs11028.483-18I241.75
kidney, embryo E18.CNhs11001.1288-20C734.52
kidney, neonate N00.CNhs11214.646-21G747.55
kidney, neonate N10.CNhs11206.758-6D553.06
kidney, neonate N20.CNhs11113.832-19I153.73
kidney, neonate N25.CNhs11122.1353-25F353.38
kidney, neonate N30.CNhs11203.1385-42H154.79
liver, adult pregnant day01.CNhs10466.508-5B281.23
liver, embryo E12.CNhs10601.355-15F819.69
liver, embryo E13.CNhs10524.378-3H625.55
liver, embryo E14.CNhs10594.409-16E125.18
liver, embryo E15.CNhs10520.433-16D727.39
liver, embryo E16.CNhs10523.462-17F523.64
liver, embryo E17.CNhs10510.481-18A326.23
liver, embryo E18.CNhs10579.499-43G431.36
liver, neonate N00.CNhs11117.641-24F436.80
liver, neonate N03.CNhs11123.1345-25G230.48
liver, neonate N06.CNhs11101.684-20A874.76
liver, neonate N07.CNhs11103.716-20H259.54
liver, neonate N10.CNhs11115.751-24B963.34
liver, neonate N20.CNhs11220.823-25A363.40
liver, neonate N25.CNhs11198.1368-26H160.10
liver, neonate N30.CNhs11106.1382-42D172.85
lung, adult.CNhs10474.28-22B159.68
lung, embryo E12.CNhs10522.354-16G239.98
lung, embryo E14.CNhs10604.404-26F843.51
lung, embryo E15.CNhs11020.432-17C530.21
lung, embryo E16.CNhs10998.458-17B641.31
lung, embryo E17.CNhs10605.480-44A644.05
lung, embryo E18.CNhs10583.1287-20I646.42
lung, neonate N00.CNhs11224.640-42C659.32
lung, neonate N06.CNhs11212.683-20E554.70
lung, neonate N07.CNhs11111.715-19A354.48
lung, neonate N10.CNhs11219.750-23E649.91
lung, neonate N20.CNhs11109.822-18A442.44
lung, neonate N25.CNhs11119.1359-25C744.03
lung, neonate N30.CNhs11133.1394-42H251.93
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A170.87
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A158.74
mammary gland, adult lactating day02.CNhs10480.595-22B648.19
mammary gland, adult pregnant day19.CNhs10476.588-5H249.12
medulla oblongata, adult.CNhs10477.17-12C261.01
medulla oblongata, neonate N30.CNhs11200.1396-42A351.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C730.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C276.75
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E143.54
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E253.10
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E352.56
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D742.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D840.99
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D945.58
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D444.12
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D546.76
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D645.85
olfactory brain, adult.CNhs10489.18-22I986.11
ovary, adult.CNhs10507.91-2I744.85
ovary, embryo E18.CNhs11040.505-44H736.15
ovary, neonate N00.CNhs11217.1299-22I457.34
oviduct, adult pregnant day01.CNhs10500.988-6G646.52
pancreas, adult.CNhs10486.34-16E479.65
pancreas, embryo E14.CNhs11012.405-44F422.58
pancreas, embryo E15.CNhs11042.1556-45F229.02
pancreas, embryo E16.CNhs11003.460-26E539.61
pancreas, embryo E17.CNhs10599.1558-45G339.28
pancreas, embryo E18.CNhs10580.1535-43I755.03
pancreas, neonate N00.CNhs11105.645-26G949.88
pancreas, neonate N01.CNhs11138.1531-43D747.62
pancreas, neonate N02.CNhs11139.1539-43D836.36
pancreas, neonate N16.CNhs11136.787-43B660.68
pancreas, neonate N25.CNhs11094.1555-45E266.41
pancreas, neonate N30.CNhs11182.1548-44H577.35
pituitary gland, adult.CNhs10493.21-1G844.60
pituitary gland, embryo E12.CNhs11018.346-16E633.49
pituitary gland, embryo E13.CNhs11009.370-44C732.21
pituitary gland, embryo E14.CNhs11037.398-44A539.65
pituitary gland, embryo E15.CNhs10592.427-16B953.02
pituitary gland, embryo E16.CNhs11036.449-43F638.71
pituitary gland, embryo E17.CNhs11039.1265-44F536.86
pituitary gland, neonate N00.CNhs11190.1308-22E933.49
placenta, adult pregnant day10.CNhs10472.539-13I750.22
placenta, adult pregnant day17.CNhs10464.577-18G365.46
prostate, adult.CNhs10470.859-1F854.91
skin, adult.CNhs10492.30-1C342.21
skin, neonate N00.CNhs11124.650-25G450.22
skin, neonate N03.CNhs11215.662-22H342.70
skin, neonate N06.CNhs11097.693-20I532.71
skin, neonate N10.CNhs11108.762-6C435.13
small intestine, neonate N16.CNhs11114.790-21I153.92
spinal cord, adult.CNhs10505.24-13C973.06
spleen, adult.CNhs10465.25-2G231.95
spleen, embryo E16.CNhs11035.461-43C129.31
spleen, embryo E18.CNhs11011.1271-21F227.78
spleen, neonate N10.CNhs11116.752-24D126.94
spleen, neonate N20.CNhs11112.824-19H129.53
spleen, neonate N25.CNhs11099.1354-25G327.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C630.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C931.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D329.57
stomach, adult.CNhs10503.33-1H649.64
stomach, embryo E12.CNhs10588.356-43E341.28
stomach, embryo E15.CNhs10603.1252-16G837.41
stomach, embryo E16.CNhs11022.459-17D435.43
stomach, embryo E17.CNhs11006.1035-18D537.84
stomach, embryo E18.CNhs10999.1286-20C631.23
stomach, neonate N03.CNhs11193.1340-24B843.29
stomach, neonate N07.CNhs11210.718-18A949.92
stomach, neonate N25.CNhs11104.1355-25E440.57
stomach, neonate N30.CNhs11134.1386-42I152.62
submandibular gland, adult.CNhs10469.59-29C152.81
testis, adult.CNhs10504.57-7G5113.87
testis, embryo E13.CNhs11031.389-23F531.55
testis, embryo E15.CNhs11034.443-27C530.11
testis, embryo E16.CNhs11033.470-26G538.89
testis, embryo E17.CNhs11029.486-18I532.55
testis, embryo E18.CNhs11027.503-18G534.64
testis, neonate N00.CNhs11189.1300-22B741.78
testis, neonate N07.CNhs11222.726-26I447.26
testis, neonate N10.CNhs11204.763-44D951.70
testis, neonate N20.CNhs11110.839-18H374.41
testis, neonate N30.CNhs11130.1391-42E276.90
thymus, adult.CNhs10471.38-12B529.07
thymus, embryo E14.CNhs11041.402-44I421.69
thymus, embryo E15.CNhs11005.430-45I220.23
thymus, embryo E16.CNhs11002.456-26C520.79
thymus, embryo E17.CNhs10581.478-18C119.87
thymus, embryo E18.CNhs10595.1273-19G424.84
thymus, neonate N02.CNhs11181.1541-43F819.11
thymus, neonate N03.CNhs11137.2104-43C721.41
thymus, neonate N06.CNhs11197.681-26C418.98
thymus, neonate N07.CNhs11211.713-19D319.89
thymus, neonate N10.CNhs11194.748-24E420.57
thymus, neonate N20.CNhs11186.820-7A222.42
thymus, neonate N25.CNhs11125.1362-25G721.17
thymus, neonate N30.CNhs11132.1393-42G224.89
tongue, adult.CNhs10499.32-1B447.61
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H316.87
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.98
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G519.47
urinary bladder, adult.CNhs10481.879-12E461.05
uterus, adult pregnant day19.CNhs10497.590-15F551.61
uterus, adult.CNhs10509.92-27E541.21
vagina, adult.CNhs10502.89-27D537.51
vesicular gland, adult.CNhs10491.51-27F863.70
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1135.54
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2121.53
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3119.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7112.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4107.56
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5114.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6112.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7101.77
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8125.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9105.62
whole body, embryo E11.CNhs11014.324-5I837.05
whole body, embryo E12.CNhs10587.857-27C950.68
whole body, embryo E13.CNhs10512.372-23H246.10
whole body, embryo E14.5.CNhs10578.420-27D245.46
whole body, embryo E14.CNhs10519.395-14B158.27
whole body, embryo E16.CNhs10514.453-14F256.44
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G552.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G547.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G555.20
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G545.99
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G554.50
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G549.23
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G547.48
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G554.49
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G554.51
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G565.25
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G553.42
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G554.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G547.39
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G549.61
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G542.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G551.82
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G553.89
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G550.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G548.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G550.94
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G547.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G548.40
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G546.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G551.06
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G551.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G549.06
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G554.43
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G555.00
whole body, embryo E17.5.CNhs10513.490-9F951.89
whole body, embryo E17.CNhs10517.475-3I547.71
whole body, embryo E18.CNhs10516.493-3B346.32
whole body, neonate N00.CNhs10525.657-19C253.93
whole body, neonate N01.CNhs10576.659-23C660.64
whole body, neonate N06.CNhs10515.692-21D158.90
whole body, neonate N10.CNhs10518.761-6B471.18





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
anatomical conduit1.40e-08122
tube2.97e-08114
regional part of nervous system3.91e-0854
occipital lobe5.24e-0810
visual cortex5.24e-0810
neocortex5.24e-0810
gray matter5.69e-0834
adult organism7.08e-0851
neural tube2.00e-0752
neural rod2.00e-0752
future spinal cord2.00e-0752
neural keel2.00e-0752
neurectoderm9.57e-0764
neural plate9.57e-0764
presumptive neural plate9.57e-0764
central nervous system9.73e-0773
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