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FFCP PHASE1:Mm9::chr5:122952292..122952303,-: Difference between revisions

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{{FFCP|EntrezGene=11938|HGNC=|MCL_coexpression_id=60|UniProt=O55143,Q5DTI2|association_with_transcript=-58bp_to_NM_001110140,NM_009722,NR_027838,uc008zli.2,uc008zlj.2_5end|description=CAGE_peak_4_at_Atp2a2_5end|id=chr5:122952292..122952303,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.61e-09!52;UBERON:0005068!1.61e-09!52;UBERON:0006241!1.61e-09!52;UBERON:0007135!1.61e-09!52;UBERON:0002020!9.15e-09!34;UBERON:0000955!1.19e-08!50;UBERON:0006238!1.19e-08!50;UBERON:0002616!1.94e-08!49;UBERON:0002021!9.02e-08!10;UBERON:0000411!9.02e-08!10;UBERON:0001950!9.02e-08!10;UBERON:0000025!9.24e-08!114;UBERON:0004111!1.64e-07!122;UBERON:0007100!2.65e-07!18;UBERON:0000948!2.65e-07!18;UBERON:0005498!2.65e-07!18;UBERON:0004140!2.65e-07!18;UBERON:0009881!2.65e-07!18;UBERON:0004141!2.65e-07!18;UBERON:0003084!2.65e-07!18;UBERON:0007005!2.65e-07!18;UBERON:0004139!2.65e-07!18;UBERON:0004291!2.65e-07!18;UBERON:0000033!5.12e-07!63;UBERON:0002791!6.10e-07!29;UBERON:0003528!6.10e-07!29;UBERON:0001893!6.10e-07!29;UBERON:0000073!7.57e-07!75;UBERON:0001016!7.57e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.67e-11,92;UBERON:0000073,4.81e-10,54;UBERON:0001049,2.54e-09,52;UBERON:0005068,2.54e-09,52;UBERON:0006241,2.54e-09,52;UBERON:0007135,2.54e-09,52;UBERON:0002020,1.41e-08,34;UBERON:0002021,6.33e-08,10;UBERON:0000411,6.33e-08,10;UBERON:0001950,6.33e-08,10;UBERON:0000025,1.19e-07,114;UBERON:0007100,1.91e-07,18;UBERON:0000948,1.91e-07,18;UBERON:0005498,1.91e-07,18;UBERON:0004140,1.91e-07,18;UBERON:0009881,1.91e-07,18;UBERON:0004141,1.91e-07,18;UBERON:0003084,1.91e-07,18;UBERON:0007005,1.91e-07,18;UBERON:0004139,1.91e-07,18;UBERON:0004291,1.91e-07,18;UBERON:0000955,2.57e-07,47;UBERON:0006238,2.57e-07,47;UBERON:0004111,2.90e-07,122;UBERON:0001016,3.29e-07,75;UBERON:0002616,4.12e-07,46;UBERON:0001017,8.33e-07,73;UBERON:0003528,9.85e-07,29;UBERON:0002791,9.85e-07,29;UBERON:0001893,9.85e-07,29|phase1_expression=1.12104192973356,3.83872948403297,2.72999543633722,3.93203474698879,3.50627010962443,1.34303417529512,1.40167584357315,0.903863264091034,2.53419699873,1.40438715793196,3.4243593645101,3.11111420081812,1.36960583944965,1.39872643870396,2.33176833270964,2.42970320867791,2.79824751251259,0.315462165358238,0.548457734422955,0.42438965179803,5.27268398936633,1.09220046320974,1.30599894569468,1.27993938234725,0.91763712426868,1.14846392823004,0.86152399231815,1.29282739611533,1.90023419456374,2.26827116783938,1.10865255327652,1.27006134691926,4.92051830067656,0,1.1554064790051,0.664938581433969,0.612508068787107,1.25559489221072,3.1253413780952,0,0.588231488031014,1.36609096991689,0,1.51076181570693,1.31790010585369,0.734187008646726,1.56478268869608,0.65407546914134,1.31811709640683,2.13872888981712,2.51975558925653,2.87505128729943,1.51004345451963,0.725362142011344,0.336093799142464,2.05807548828758,1.71920063963254,2.57836046138721,2.42779753031517,2.11596391708813,1.90149421051854,0.677689064138264,0,2.2497492932035,1.97773272513395,2.1314403448383,0.599200221036809,0.384218305321555,1.65903379693564,1.4850653216486,1.47227472945967,3.71346279724945,4.41737081903227,1.10241719293459,0.958454710182364,1.83843757322004,2.20231761998777,7.02280359468532,6.91229399653096,1.71452174049252,1.73826522844578,1.04182674111352,7.53794097303729,3.93933827022176,4.43114918552749,2.35702868378934,3.84403538157578,2.60959224155421,2.87759534666099,1.81371744256285,1.44932244350839,1.72084775396277,1.3599426674155,2.69851595818909,1.29955283489534,0.896053774194671,1.26399978118577,0.511290967734173,0.519572009205738,1.06001872353102,2.39433813620357,0,0,0,1.29894624606728,1.52015919285059,2.52762222507392,1.59857431606684,0.258937883647172,0.742210695324124,1.73485326766136,1.82679286987285,1.61430848079241,1.20578112442098,1.88141931417128,1.13099932196708,1.48316980640624,1.59059292611903,1.76922110389975,2.58826959915855,1.32504911076236,2.42437626567611,0,8.19786231632332,3.14170060220183,1.02182822083437,0.599075622529601,0.599902730993408,1.27070227073065,3.89455662452539,7.32000964509802,0.879580464790051,7.64827008846016,8.43861009190091,6.44142938134636,4.70499662896497,0.611036183101898,1.49288364732112,0.758168275301024,1.89397670297827,0.650602214813519,0.689706313300419,1.44049703844279,1.05493372485001,1.29269348387523,1.2811372028485,1.78033276663485,0.776110112217047,0.646703978798527,0.189106080167819,0.879755620819744,1.31517439456545,1.39023624612799,1.0447564995665,0.823128545631774,1.79130840136644,0,1.80143534980301,0.568326998791185,1.03562886267751,2.81431271977315,2.34080679899319,2.60419209143731,2.16440654922144,3.85667782218446,3.48800917125612,5.90201483079162,7.23945122676451,6.08871444679878,6.7308660272429,8.83650024049827,6.43279944671462,5.70830299756732,8.18659154438268,4.83666881697493,1.54356918568927,0.330418782983798,0.793351699990633,1.2797295032114,1.16118335930219,1.2886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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:11938
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=uniprot:O55143,uniprot:Q5DTI2
|association_with_transcript=-58bp_to_NM_001110140,NM_009722,NR_027838,uc008zli.2,uc008zlj.2_5end
|cluster_id=chr5:122952292..122952303,-
|description=CAGE_peak_4_at_Atp2a2_5end
|id=chr5:122952292..122952303,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.61e-09!52;UBERON:0005068!1.61e-09!52;UBERON:0006241!1.61e-09!52;UBERON:0007135!1.61e-09!52;UBERON:0002020!9.15e-09!34;UBERON:0000955!1.19e-08!50;UBERON:0006238!1.19e-08!50;UBERON:0002616!1.94e-08!49;UBERON:0002021!9.02e-08!10;UBERON:0000411!9.02e-08!10;UBERON:0001950!9.02e-08!10;UBERON:0000025!9.24e-08!114;UBERON:0004111!1.64e-07!122;UBERON:0007100!2.65e-07!18;UBERON:0000948!2.65e-07!18;UBERON:0005498!2.65e-07!18;UBERON:0004140!2.65e-07!18;UBERON:0009881!2.65e-07!18;UBERON:0004141!2.65e-07!18;UBERON:0003084!2.65e-07!18;UBERON:0007005!2.65e-07!18;UBERON:0004139!2.65e-07!18;UBERON:0004291!2.65e-07!18;UBERON:0000033!5.12e-07!63;UBERON:0002791!6.10e-07!29;UBERON:0003528!6.10e-07!29;UBERON:0001893!6.10e-07!29;UBERON:0000073!7.57e-07!75;UBERON:0001016!7.57e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.67e-11,92;UBERON:0000073,4.81e-10,54;UBERON:0001049,2.54e-09,52;UBERON:0005068,2.54e-09,52;UBERON:0006241,2.54e-09,52;UBERON:0007135,2.54e-09,52;UBERON:0002020,1.41e-08,34;UBERON:0002021,6.33e-08,10;UBERON:0000411,6.33e-08,10;UBERON:0001950,6.33e-08,10;UBERON:0000025,1.19e-07,114;UBERON:0007100,1.91e-07,18;UBERON:0000948,1.91e-07,18;UBERON:0005498,1.91e-07,18;UBERON:0004140,1.91e-07,18;UBERON:0009881,1.91e-07,18;UBERON:0004141,1.91e-07,18;UBERON:0003084,1.91e-07,18;UBERON:0007005,1.91e-07,18;UBERON:0004139,1.91e-07,18;UBERON:0004291,1.91e-07,18;UBERON:0000955,2.57e-07,47;UBERON:0006238,2.57e-07,47;UBERON:0004111,2.90e-07,122;UBERON:0001016,3.29e-07,75;UBERON:0002616,4.12e-07,46;UBERON:0001017,8.33e-07,73;UBERON:0003528,9.85e-07,29;UBERON:0002791,9.85e-07,29;UBERON:0001893,9.85e-07,29
|phase1_expression=1.12104192973356,3.83872948403297,2.72999543633722,3.93203474698879,3.50627010962443,1.34303417529512,1.40167584357315,0.903863264091034,2.53419699873,1.40438715793196,3.4243593645101,3.11111420081812,1.36960583944965,1.39872643870396,2.33176833270964,2.42970320867791,2.79824751251259,0.315462165358238,0.548457734422955,0.42438965179803,5.27268398936633,1.09220046320974,1.30599894569468,1.27993938234725,0.91763712426868,1.14846392823004,0.86152399231815,1.29282739611533,1.90023419456374,2.26827116783938,1.10865255327652,1.27006134691926,4.92051830067656,0,1.1554064790051,0.664938581433969,0.612508068787107,1.25559489221072,3.1253413780952,0,0.588231488031014,1.36609096991689,0,1.51076181570693,1.31790010585369,0.734187008646726,1.56478268869608,0.65407546914134,1.31811709640683,2.13872888981712,2.51975558925653,2.87505128729943,1.51004345451963,0.725362142011344,0.336093799142464,2.05807548828758,1.71920063963254,2.57836046138721,2.42779753031517,2.11596391708813,1.90149421051854,0.677689064138264,0,2.2497492932035,1.97773272513395,2.1314403448383,0.599200221036809,0.384218305321555,1.65903379693564,1.4850653216486,1.47227472945967,3.71346279724945,4.41737081903227,1.10241719293459,0.958454710182364,1.83843757322004,2.20231761998777,7.02280359468532,6.91229399653096,1.71452174049252,1.73826522844578,1.04182674111352,7.53794097303729,3.93933827022176,4.43114918552749,2.35702868378934,3.84403538157578,2.60959224155421,2.87759534666099,1.81371744256285,1.44932244350839,1.72084775396277,1.3599426674155,2.69851595818909,1.29955283489534,0.896053774194671,1.26399978118577,0.511290967734173,0.519572009205738,1.06001872353102,2.39433813620357,0,0,0,1.29894624606728,1.52015919285059,2.52762222507392,1.59857431606684,0.258937883647172,0.742210695324124,1.73485326766136,1.82679286987285,1.61430848079241,1.20578112442098,1.88141931417128,1.13099932196708,1.48316980640624,1.59059292611903,1.76922110389975,2.58826959915855,1.32504911076236,2.42437626567611,0,8.19786231632332,3.14170060220183,1.02182822083437,0.599075622529601,0.599902730993408,1.27070227073065,3.89455662452539,7.32000964509802,0.879580464790051,7.64827008846016,8.43861009190091,6.44142938134636,4.70499662896497,0.611036183101898,1.49288364732112,0.758168275301024,1.89397670297827,0.650602214813519,0.689706313300419,1.44049703844279,1.05493372485001,1.29269348387523,1.2811372028485,1.78033276663485,0.776110112217047,0.646703978798527,0.189106080167819,0.879755620819744,1.31517439456545,1.39023624612799,1.0447564995665,0.823128545631774,1.79130840136644,0,1.80143534980301,0.568326998791185,1.03562886267751,2.81431271977315,2.34080679899319,2.60419209143731,2.16440654922144,3.85667782218446,3.48800917125612,5.90201483079162,7.23945122676451,6.08871444679878,6.7308660272429,8.83650024049827,6.43279944671462,5.70830299756732,8.18659154438268,4.83666881697493,1.54356918568927,0.330418782983798,0.793351699990633,1.2797295032114,1.16118335930219,1.28867461322093,1.61346819698674,1.11189021922435,1.90225626112559,0.949058123089023,1.81168850196412,1.25667604400135,0.596869416123452,0.974820435595601,0.898819408654221,1.29682829924817,1.1948476395262,1.51734320762465,0.571242563048644,2.25415471346161,0.203651327845314,1.74557238450863,1.61312385747733,0.948548056863859,0.738050739898011,0.470996183524124,0.370191491765402,2.37162101669719,2.16898637430922,1.17935397067922,1.57403478669398,1.01430060694251,1.68824011826692,1.01850340712568,0.575392274901621,0.810676133875177,0.274561413188081,0,1.86070473834252,1.24815069245824,1.01031551178845,1.07638448113147,0.482443521363367,1.10851914099963,0.568474235311454,1.46668478797823,1.18821560042632,0.469380496577004,1.34005005953453,1.19021820443007,1.75620283072019,1.57635144106191,0.664394068946325,3.34855014180723,0.81931657357869,1.38147985492716,1.88043776155965,3.01582567878545,2.71952841909355,1.47529281905711,0.551873492609465,5.61927064957272,4.92289083687253,1.14754461763673,1.76729649043061,0.315508219416257,0.390438744296638,1.07711698866399,0.238968797952552,0.222798674082394,1.13230612315533,0.404810701674894,0.584511715822624,1.18586333383957,2.24924921495265,0.99358059645788,0.534196811001766,2.93196526836437,1.48473110675282,1.32745138339963,0.242780636154981,0.906970670894253,0.377210159511796,0.590603785761546,0.307435147943927,0.516856586336442,2.18120237686503,0.356497378384721,0.316036757935816,2.10837217149998,0,1.02131881726136,0.36012218806262,0.905510786479282,1.71469628025274,2.12808280370728,1.24858172321449,1.64549020602121,1.2178597964584,1.87737366450968,2.54198485036584,0.661585194164886,1.6488625294148,1.29171541356724,2.11095237248546,2.14870219205646,0.820704498725306,1.7488850197791,6.67531087237835,1.87957968877638,2.27025554759545,2.03713980106683,2.26042148405629,1.36694227721025,2.74533807847827,0.849892149969277,0.69975726161829,0.690999869022119,0.954670618015114,0.790839983952838,1.01659733563424,1.62008011232702,0.627264888043406,1.09181281873089,1.48350781023303,1.40510874733071,0.523511883968059,0.518459893167171,1.86401793926078,15.7834022831573,0.448549638131936,1.15820943319968,0.583353565032143,2.32487682259916,1.35164900392623,1.40828686374905,0.781226309063701,2.41176492179135,10.8712854371703,10.0810502190253,0,0.608175645870493,0.924398614483445,1.29920822977795,1.25318686967237,0.79472541912506,1.68273629327956,1.03382669022204,0.807731599585181,1.295515713135,1.10908803650525,0.877120926657772,1.25075394132428,0.818138315270983,2.26730383615211,1.99787358036658,2.06341870201794,2.3503846290971,0.965947970160952,2.62755465631655,1.28206136987086,1.2862102744744,1.50471631210609,6.21227026878773,6.90487854760765,5.15605962095457,8.76451229952807,15.7568979547248,15.107877947794,10.1253375034771,11.7083512838297,10.8754178156209,13.9795284172991,0.518936737920883,0.798049746802062,1.70733605754134,1.70174701947806,0.838452650511929,0.919217542250071,2.22246727801615,1.85431551515005,1.92551525755089,1.26348605881899,1.2673964994512,1.32038438970253,1.591905626988,1.92075457214608,1.55075766180156,0.952587382566147,2.31768651889711,1.54327376370964,1.23625770240992,1.91358596174717,2.40008476669791,0.887379030796687,0.953744759789284,1.59881058295561,1.97629698872194,1.69229215783353,1.64635175585495,2.63069711437843,1.62964936615034,1.68342681497322,2.49133538060766,1.57607171800902,2.45538625901814,1.54936841185966,2.12197272079256,1.99848462350357,1.40358965067245,1.71896843238639,2.48674831689496,2.8676884485537,2.55054619182464
|short_description=p4@Atp2a2
}}

Revision as of 05:57, 6 August 2015

Short description:p4@Atp2a2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Atp2a2_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: -58bp_to_NM_001110140, NM_009722, NR_027838, uc008zli.2, uc008zlj.2_5end
EntrezGene:11938
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Atp2a2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D92.88
Mouse Schwann, donor2.CNhs12573.11746-123F91.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F52.59
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.20
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D57.65
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F26.44
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C63.86
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G35.90
heart, neonate N00.CNhs11213.639-21E37.24
heart, neonate N03.CNhs11221.1349-25I26.09
heart, neonate N10.CNhs11118.749-24G16.73
heart, neonate N16.CNhs11209.782-15G18.84
heart, neonate N20.CNhs11127.821-26I66.43
heart, neonate N25.CNhs11196.1351-25D35.71
heart, neonate N30.CNhs11202.1390-42D28.19
hippocampus, adult.CNhs10478.13-16E84.84
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.61
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C25.62
medulla oblongata, neonate N30.CNhs11200.1396-42A34.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H32.11
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G515.78
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H310.87
testis, neonate N30.CNhs11130.1391-42E210.08
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest3.67e-1192
regional part of nervous system4.81e-1054
neural tube2.54e-0952
neural rod2.54e-0952
future spinal cord2.54e-0952
neural keel2.54e-0952
gray matter1.41e-0834
occipital lobe6.33e-0810
visual cortex6.33e-0810
neocortex6.33e-0810
tube1.19e-07114
primary circulatory organ1.91e-0718
heart1.91e-0718
primitive heart tube1.91e-0718
primary heart field1.91e-0718
anterior lateral plate mesoderm1.91e-0718
heart tube1.91e-0718
heart primordium1.91e-0718
cardiac mesoderm1.91e-0718
cardiogenic plate1.91e-0718
heart rudiment1.91e-0718
brain2.57e-0747
future brain2.57e-0747
anatomical conduit2.90e-07122
nervous system3.29e-0775
regional part of brain4.12e-0746
central nervous system8.33e-0773
brain grey matter9.85e-0729
regional part of telencephalon9.85e-0729
telencephalon9.85e-0729
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