FFCP PHASE1:Mm9::chr8:28132545..28132551,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr8:28132545..28132551,+ to FFCP PHASE1:Mm9::chr8:28132545..28132551,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=205 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:28132545..28132551,+ | |||
|description=CAGE_peak_at_chr8:28132545..28132551,+ | |||
|id=chr8:28132545..28132551,+ | |||
|ontology_enrichment_celltype=CL:0002453!2.94e-42!8;CL:0000333!9.45e-34!10;CL:0000095!9.45e-34!10;CL:0000243!9.45e-34!10;CL:0000123!9.45e-34!10;CL:0000125!9.45e-34!10;CL:0000030!9.45e-34!10;CL:0000339!9.45e-34!10;CL:0000128!3.04e-29!6;CL:0000126!3.04e-29!6;CL:0000127!3.04e-29!6;CL:0002604!2.51e-15!2;CL:0002605!2.51e-15!2;CL:0000864!7.66e-15!2;CL:0000878!7.66e-15!2;CL:0000129!7.66e-15!2;CL:0002319!1.21e-09!43;CL:0000221!2.08e-09!44;CL:0000133!2.08e-09!44;CL:0000055!3.45e-08!50;CL:0002194!7.14e-08!4;CL:0000766!7.14e-08!4;CL:0000576!7.14e-08!4;CL:0000235!7.14e-08!4;CL:0002009!7.14e-08!4;CL:0000040!7.14e-08!4;CL:0000559!7.14e-08!4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,7.40e-76,8;CL:0000333,8.33e-61,10;CL:0000095,8.33e-61,10;CL:0000243,8.33e-61,10;CL:0000123,8.33e-61,10;CL:0000125,8.33e-61,10;CL:0000030,8.33e-61,10;CL:0000339,8.33e-61,10;CL:0000128,4.11e-52,6;CL:0000126,4.11e-52,6;CL:0000127,4.11e-52,6;CL:0002605,1.78e-26,2;CL:0002604,1.78e-26,2;CL:0000878,1.35e-25,2;CL:0000129,1.35e-25,2;CL:0002319,2.01e-14,43;CL:0000221,4.23e-14,44;CL:0000133,4.23e-14,44;CL:0002194,2.39e-13,4;CL:0000766,2.39e-13,4;CL:0000234,2.39e-13,4;CL:0000576,2.39e-13,4;CL:0000235,2.39e-13,4;CL:0000864,2.39e-13,4;CL:0002009,2.39e-13,4;CL:0000040,2.39e-13,4;CL:0000559,2.39e-13,4;CL:0000219,1.59e-11,54;CL:0002321,6.38e-09,70;CL:0000473,4.83e-08,7;CL:0000557,4.83e-08,7;CL:0002603,1.52e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!2.29e-14!2;UBERON:0005290!2.29e-14!2;UBERON:0010096!2.29e-14!2;UBERON:0004733!8.12e-11!6;UBERON:0004732!8.12e-11!6;UBERON:0002028!8.12e-11!6;UBERON:0007277!8.12e-11!6;UBERON:0001017!2.63e-10!73;UBERON:0005743!2.63e-10!73;UBERON:0000073!5.32e-10!75;UBERON:0001016!5.32e-10!75;UBERON:0003076!2.71e-09!12;UBERON:0003057!2.71e-09!12;UBERON:0004121!4.97e-07!102;UBERON:0000924!4.97e-07!102;UBERON:0006601!4.97e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0001954,2.72e-08,7;UBERON:0003022,2.72e-08,7;UBERON:0002421,2.72e-08,7;UBERON:0000349,2.72e-08,7;UBERON:0002600,2.72e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92445281484804,9.88587822305123,8.55491555926847,2.93971485413261,2.87505128729943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19840044207362,5.76327457982332,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92445281484804,9.88587822305123,8.55491555926847,2.93971485413261,2.87505128729943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19840044207362,5.76327457982332,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:28132545..28132551,+ | |||
}} | }} |
Latest revision as of 07:38, 6 August 2015
Short description: | p@chr8:28132545..28132551, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:28132545..28132551, + |
Coexpression cluster: | MCL_coexpression_mm9:205 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 7.40e-76 | 8 |
migratory neural crest cell | 8.33e-61 | 10 |
neuron associated cell | 8.33e-61 | 10 |
glial cell (sensu Vertebrata) | 8.33e-61 | 10 |
neuron associated cell (sensu Vertebrata) | 8.33e-61 | 10 |
glial cell | 8.33e-61 | 10 |
glioblast | 8.33e-61 | 10 |
glioblast (sensu Vertebrata) | 8.33e-61 | 10 |
oligodendrocyte | 4.11e-52 | 6 |
macroglial cell | 4.11e-52 | 6 |
astrocyte | 4.11e-52 | 6 |
astrocyte of the cerebral cortex | 1.78e-26 | 2 |
astrocyte of the hippocampus | 1.78e-26 | 2 |
central nervous system macrophage | 1.35e-25 | 2 |
microglial cell | 1.35e-25 | 2 |
neural cell | 2.01e-14 | 43 |
ectodermal cell | 4.23e-14 | 44 |
neurectodermal cell | 4.23e-14 | 44 |
monopoietic cell | 2.39e-13 | 4 |
myeloid leukocyte | 2.39e-13 | 4 |
phagocyte | 2.39e-13 | 4 |
monocyte | 2.39e-13 | 4 |
macrophage | 2.39e-13 | 4 |
tissue-resident macrophage | 2.39e-13 | 4 |
macrophage dendritic cell progenitor | 2.39e-13 | 4 |
monoblast | 2.39e-13 | 4 |
promonocyte | 2.39e-13 | 4 |
motile cell | 1.59e-11 | 54 |
embryonic cell | 6.38e-09 | 70 |
defensive cell | 4.83e-08 | 7 |
granulocyte monocyte progenitor cell | 4.83e-08 | 7 |
astrocyte of the cerebellum | 1.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |
Ammon's horn | 2.72e-08 | 7 |
lobe parts of cerebral cortex | 2.72e-08 | 7 |
hippocampal formation | 2.72e-08 | 7 |
limbic system | 2.72e-08 | 7 |
limbic lobe | 2.72e-08 | 7 |