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FFCP PHASE1:Mm9::chr13:74908074..74908117,-: Difference between revisions

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{{FFCP|EntrezGene=12380|HGNC=|MCL_coexpression_id=2872|UniProt=Q8CE04,Q8C281,Q921U7|association_with_transcript=0bp_to_ENSMUST00000163477,uc007rfn.1,uc007rfo.1,uc011zbx.1_5end|description=CAGE_peak_3_at_Cast_5end|id=chr13:74908074..74908117,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!6.43e-11!47;UBERON:0000926!2.68e-10!193;UBERON:0004120!2.68e-10!193;UBERON:0006603!2.68e-10!193;UBERON:0004119!5.36e-09!130;UBERON:0000925!5.36e-09!130;UBERON:0006595!5.36e-09!130;UBERON:0004921!1.12e-08!126;UBERON:0004185!1.12e-08!126;UBERON:0003104!1.23e-08!131;UBERON:0009142!1.23e-08!131;UBERON:0001007!1.46e-08!128;UBERON:0001555!1.46e-08!128;UBERON:0007026!1.46e-08!128;UBERON:0000077!3.69e-08!97;UBERON:0004872!1.33e-07!33;UBERON:0001041!4.05e-07!92;UBERON:0009569!4.54e-07!66;UBERON:0002107!4.82e-07!22;UBERON:0007499!4.82e-07!22;UBERON:0006925!4.82e-07!22;UBERON:0009497!4.82e-07!22;UBERON:0000015!4.82e-07!22;UBERON:0002423!4.82e-07!22;UBERON:0006235!4.82e-07!22;UBERON:0008835!4.82e-07!22;UBERON:0003894!4.82e-07!22;UBERON:0004161!4.82e-07!22;UBERON:0008836!4.82e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.80e-11,118;UBERON:0000925,1.80e-11,118;UBERON:0006595,1.80e-11,118;UBERON:0004921,3.80e-11,114;UBERON:0001007,5.52e-11,116;UBERON:0001555,5.52e-11,116;UBERON:0007026,5.52e-11,116;UBERON:0003914,6.39e-11,47;UBERON:0001041,7.67e-10,80;UBERON:0004872,1.33e-07,33;UBERON:0001048,4.05e-07,134;UBERON:0009569,4.52e-07,66;UBERON:0002107,4.80e-07,22;UBERON:0007499,4.80e-07,22;UBERON:0006925,4.80e-07,22;UBERON:0009497,4.80e-07,22;UBERON:0000015,4.80e-07,22;UBERON:0002423,4.80e-07,22;UBERON:0006235,4.80e-07,22;UBERON:0008835,4.80e-07,22;UBERON:0003894,4.80e-07,22;UBERON:0004161,4.80e-07,22;UBERON:0008836,4.80e-07,22|phase1_expression=8.48788889655408,13.9590163055744,14.5599756604652,11.4936400296595,14.5259761684441,6.5472916045637,4.43864017131499,52.9405626110463,26.18670232021,21.2998718953014,5.82141091966717,3.82906363177615,34.4113467161724,27.4500063595652,35.3096347524602,45.5569351627108,57.364074006508,7.72882305127682,10.0093536532189,11.0341309467488,6.54833334163237,2.6808556824239,4.17919662622297,9.11956809922418,10.782236210157,14.9300310669905,7.75371593086335,11.8509177977239,18.4322716872683,4.78857246543868,11.7517170647311,3.81018404075779,4.92051830067656,0,6.64358725427932,4.98703936075477,6.12508068787107,31.808403936005,13.2827008569046,12.0410461113974,41.764435650202,30.0540013381716,17.4783727091215,11.5825072537531,10.8473316404881,9.17733760808408,1.56478268869608,0.436050312760893,1.09843091367236,3.69416808241138,1.67983705950435,0,7.04686945442493,21.035502118329,19.1573465511204,12.8629718017974,6.87680255853016,15.9858348606007,0.202316460859598,0,0,2.71075625655306,0.889294796111139,0.449949858640699,0.988866362566974,0,0,0.768436610643109,0.311068836925433,0,0.420649922702764,1.42825492201902,0.441737081903227,0.244981598429908,0.0958454710182364,0,4.40463523997555,6.76742891851495,5.22262213071228,0.263772575460388,0.182975287204819,0.52091337055676,6.70039197603314,9.00420176050688,4.43114918552749,1.76777151284201,2.27794689278565,1.1183966749518,9.92013132664711,12.0914496170857,21.4499721639242,6.88339101585109,59.1575060325743,15.6513925574967,19.4932925234301,19.7131830322828,24.9991067834518,4.09032774187339,2.33807404142582,1.7666978725517,6.90132756905734,5.13305909657271,10.1922095882658,7.11066703153331,53.0403050477475,69.1672432747019,41.4530044912122,18.7261562739258,22.2686579936568,14.1020032111584,6.7659277438793,5.1759131313064,10.6083128737787,9.64624899536784,15.521709341913,9.17366116706631,55.1244778047654,28.0522752424629,19.4614321428972,22.3238252927425,30.6969710659947,32.4866419600599,1.86391761218122,5.27005434620785,6.91174132484402,10.2182822083437,6.58983184782562,1.79970819298022,7.11593271609162,11.6836698735762,3.66000482254901,0.502617408451458,6.43149984711423,4.09144731728529,7.68815764870372,3.89379031362618,13.4427960282417,25.0058010926287,20.4705434331277,17.4666740385773,4.16385417480652,3.67843367093557,7.74267158163002,8.28876498096433,9.86529237694254,6.66191345481219,5.90320864726292,7.76110112217047,3.66465587985832,6.42960672570586,6.68614271823006,5.91828477554452,17.5169767012127,21.9398864908965,31.2788847340074,8.35943920637671,5.61770549850588,2.83082697826187,3.9782889915383,18.2270679831242,20.1692411583743,22.5077576826269,21.7805156738393,23.6117078096885,24.9912722877553,21.1605889722871,19.3156849007726,23.8201298429026,20.4054213892716,19.5359282254123,19.8618583387347,18.2749984281665,20.8572609526498,23.3519168643047,2.94405927989778,1.64647379806855,25.1118275067686,21.6849464664106,3.41261200856374,5.80591679651096,9.79392706047909,9.68080918192044,14.4545728499166,14.0766963323294,18.506633400236,26.0224348463937,20.6094871216221,24.6706025331027,25.7352594997239,15.2799299471218,31.340017231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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:12380
|HGNC=
|MCL_coexpression_id=2872
|TSSclassifier=NA
|UniProt=uniprot:Q8CE04,uniprot:Q8C281,uniprot:Q921U7
|association_with_transcript=0bp_to_ENSMUST00000163477,uc007rfn.1,uc007rfo.1,uc011zbx.1_5end
|cluster_id=chr13:74908074..74908117,-
|description=CAGE_peak_3_at_Cast_5end
|id=chr13:74908074..74908117,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!6.43e-11!47;UBERON:0000926!2.68e-10!193;UBERON:0004120!2.68e-10!193;UBERON:0006603!2.68e-10!193;UBERON:0004119!5.36e-09!130;UBERON:0000925!5.36e-09!130;UBERON:0006595!5.36e-09!130;UBERON:0004921!1.12e-08!126;UBERON:0004185!1.12e-08!126;UBERON:0003104!1.23e-08!131;UBERON:0009142!1.23e-08!131;UBERON:0001007!1.46e-08!128;UBERON:0001555!1.46e-08!128;UBERON:0007026!1.46e-08!128;UBERON:0000077!3.69e-08!97;UBERON:0004872!1.33e-07!33;UBERON:0001041!4.05e-07!92;UBERON:0009569!4.54e-07!66;UBERON:0002107!4.82e-07!22;UBERON:0007499!4.82e-07!22;UBERON:0006925!4.82e-07!22;UBERON:0009497!4.82e-07!22;UBERON:0000015!4.82e-07!22;UBERON:0002423!4.82e-07!22;UBERON:0006235!4.82e-07!22;UBERON:0008835!4.82e-07!22;UBERON:0003894!4.82e-07!22;UBERON:0004161!4.82e-07!22;UBERON:0008836!4.82e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.80e-11,118;UBERON:0000925,1.80e-11,118;UBERON:0006595,1.80e-11,118;UBERON:0004921,3.80e-11,114;UBERON:0001007,5.52e-11,116;UBERON:0001555,5.52e-11,116;UBERON:0007026,5.52e-11,116;UBERON:0003914,6.39e-11,47;UBERON:0001041,7.67e-10,80;UBERON:0004872,1.33e-07,33;UBERON:0001048,4.05e-07,134;UBERON:0009569,4.52e-07,66;UBERON:0002107,4.80e-07,22;UBERON:0007499,4.80e-07,22;UBERON:0006925,4.80e-07,22;UBERON:0009497,4.80e-07,22;UBERON:0000015,4.80e-07,22;UBERON:0002423,4.80e-07,22;UBERON:0006235,4.80e-07,22;UBERON:0008835,4.80e-07,22;UBERON:0003894,4.80e-07,22;UBERON:0004161,4.80e-07,22;UBERON:0008836,4.80e-07,22
|phase1_expression=8.48788889655408,13.9590163055744,14.5599756604652,11.4936400296595,14.5259761684441,6.5472916045637,4.43864017131499,52.9405626110463,26.18670232021,21.2998718953014,5.82141091966717,3.82906363177615,34.4113467161724,27.4500063595652,35.3096347524602,45.5569351627108,57.364074006508,7.72882305127682,10.0093536532189,11.0341309467488,6.54833334163237,2.6808556824239,4.17919662622297,9.11956809922418,10.782236210157,14.9300310669905,7.75371593086335,11.8509177977239,18.4322716872683,4.78857246543868,11.7517170647311,3.81018404075779,4.92051830067656,0,6.64358725427932,4.98703936075477,6.12508068787107,31.808403936005,13.2827008569046,12.0410461113974,41.764435650202,30.0540013381716,17.4783727091215,11.5825072537531,10.8473316404881,9.17733760808408,1.56478268869608,0.436050312760893,1.09843091367236,3.69416808241138,1.67983705950435,0,7.04686945442493,21.035502118329,19.1573465511204,12.8629718017974,6.87680255853016,15.9858348606007,0.202316460859598,0,0,2.71075625655306,0.889294796111139,0.449949858640699,0.988866362566974,0,0,0.768436610643109,0.311068836925433,0,0.420649922702764,1.42825492201902,0.441737081903227,0.244981598429908,0.0958454710182364,0,4.40463523997555,6.76742891851495,5.22262213071228,0.263772575460388,0.182975287204819,0.52091337055676,6.70039197603314,9.00420176050688,4.43114918552749,1.76777151284201,2.27794689278565,1.1183966749518,9.92013132664711,12.0914496170857,21.4499721639242,6.88339101585109,59.1575060325743,15.6513925574967,19.4932925234301,19.7131830322828,24.9991067834518,4.09032774187339,2.33807404142582,1.7666978725517,6.90132756905734,5.13305909657271,10.1922095882658,7.11066703153331,53.0403050477475,69.1672432747019,41.4530044912122,18.7261562739258,22.2686579936568,14.1020032111584,6.7659277438793,5.1759131313064,10.6083128737787,9.64624899536784,15.521709341913,9.17366116706631,55.1244778047654,28.0522752424629,19.4614321428972,22.3238252927425,30.6969710659947,32.4866419600599,1.86391761218122,5.27005434620785,6.91174132484402,10.2182822083437,6.58983184782562,1.79970819298022,7.11593271609162,11.6836698735762,3.66000482254901,0.502617408451458,6.43149984711423,4.09144731728529,7.68815764870372,3.89379031362618,13.4427960282417,25.0058010926287,20.4705434331277,17.4666740385773,4.16385417480652,3.67843367093557,7.74267158163002,8.28876498096433,9.86529237694254,6.66191345481219,5.90320864726292,7.76110112217047,3.66465587985832,6.42960672570586,6.68614271823006,5.91828477554452,17.5169767012127,21.9398864908965,31.2788847340074,8.35943920637671,5.61770549850588,2.83082697826187,3.9782889915383,18.2270679831242,20.1692411583743,22.5077576826269,21.7805156738393,23.6117078096885,24.9912722877553,21.1605889722871,19.3156849007726,23.8201298429026,20.4054213892716,19.5359282254123,19.8618583387347,18.2749984281665,20.8572609526498,23.3519168643047,2.94405927989778,1.64647379806855,25.1118275067686,21.6849464664106,3.41261200856374,5.80591679651096,9.79392706047909,9.68080918192044,14.4545728499166,14.0766963323294,18.506633400236,26.0224348463937,20.6094871216221,24.6706025331027,25.7352594997239,15.2799299471218,31.3400172318307,25.490082976559,1.89667900953082,8.22589290790047,9.01661885384643,6.72049381889537,6.59438456369928,10.7307804432187,11.5090497566148,15.4990655378582,18.6828486131236,17.7691916047393,13.933273473096,24.1925403288336,20.0490175015467,28.1077640481067,36.717681971319,30.6294992885569,23.1709525121092,23.0156909960649,32.102774901457,23.612281534175,30.1913233707445,23.8170206507842,17.1620720213008,14.9021537988796,17.5809465251474,28.4641677604387,19.2143317773269,4.16881105895066,6.19266910479698,5.09235257325564,5.63256595892405,6.70025029767263,7.37935286746643,17.1717610114863,12.9260818167077,17.0527811029557,11.799652880654,18.1888279334469,14.3328534948693,21.1187625529007,1.50791283939272,0.54390568381871,7.86822836830458,6.62248191131358,17.3394637186815,14.417037450841,8.19674726883377,34.5885170269991,3.15508219416257,2.73307121007647,3.44677436372478,4.77937595905104,3.34198011123591,2.83076530788832,4.45291771842384,7.01414058987149,5.53402889125133,7.06906896127976,11.7810270722863,6.58842733568844,13.845391545054,12.7026994688852,7.96470830039777,7.28341908464944,3.32555912661226,9.05304382828311,1.77181135728464,5.84126781093462,14.9888410037568,5.45300594216258,11.4079161083111,3.47640433729398,4.21674434299995,11.3449097573006,13.9580238359053,4.86164953884538,2.32845630808958,4.07240366560025,5.85222771019503,5.70780216326626,5.10101963866575,4.87143918583359,14.3149741918863,26.0553447162499,7.93902232997863,54.4124634706884,43.4339307811986,32.0864760617789,42.9740438411291,46.1235928283622,27.9821603164657,19.284231409093,30.4150167820178,8.46186158649212,25.0012611949111,59.5244324134824,60.00876596953,48.9585290661958,28.5563762389677,24.7714070612875,28.7455945513201,27.6854479224383,4.58687190692646,10.3692928234693,18.3609079397062,27.1814784818809,25.9851450857951,27.3774623161186,24.6307298061501,28.0078857922912,28.774524070778,21.7468759580424,5.07323644815771,7.92437694033088,6.28742263736971,8.75030347548214,8.91202781996345,13.0096216627899,13.378725205616,9.50492009360836,5.55754525456268,4.59009829569411,6.91272015018877,7.58426689507628,6.28448167399509,5.75181360123033,4.93699127315621,7.87717460936918,8.54329825559439,11.418567704397,13.7351260272357,15.2459339421703,13.10757074466,11.5950112907367,12.8644402576473,14.1431407211284,16.4796432076012,94.7733003511584,23.5305110576509,30.5027112472217,30.5550001782623,29.3648182928929,15.2022805115457,14.1026750685794,60.6662512793756,12.0377304968487,2.25900737046827,1.84130094602871,0,0.859265911718438,2.74033007908257,0.755393897389701,2.70009000092722,4.5032120322422,5.43770890781046,2.07104124700728,6.2272408550506,3.59122386060928,5.63420898988643,13.6139761558245,12.5767897576789,11.3982975239009,9.33436256766784,8.85950746127245,8.3438994493872,10.1078884705519,11.1530891951705,11.8834595073228,13.0161695383137,11.4605022804716,12.6932386391905,12.859929664643,11.4725482685407,13.6965546529231,11.5384052224926,9.86232764900462,13.0290315906458,13.665637074269,14.0677352068919,11.046327664057,11.7636725519163,11.253742849593,9.51225458938417,16.0472523977084,13.9878237261238,10.661703161497,9.6094364680581,10.4414751318097,13.0953933814301,11.4653262477615,13.3105561576988,5.24602213669686,11.9305120307158,21.2722343507815,23.1458881803301,20.2944105589954,21.5637087126992
|short_description=p3@Cast
}}

Revision as of 07:59, 6 August 2015

Short description:p3@Cast
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cast_5end
Coexpression cluster:MCL_coexpression_mm9:2872
Association with transcript: 0bp_to_ENSMUST00000163477, uc007rfn.1, uc007rfo.1, uc011zbx.1_5end
EntrezGene:12380
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cast

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.49
CD326+ enterocyte, pool2.CNhs13197.11849-124I414.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E952.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E726.19
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F221.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.82
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E434.41
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E827.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A135.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A345.56
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A557.36
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.01
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.03
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.18
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.78
GP2+ M cell, pool1.CNhs13228.11845-124H914.93
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I211.85
Ileum epithelium, pool1.CNhs13199.10252-104B918.43
Ileum epithelium, pool2.CNhs13232.10253-104C14.79
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.64
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G831.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H113.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H312.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G941.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H230.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H417.48
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.58
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.85
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.05
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I921.04
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A119.16
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.99
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D99.92
Mouse Schwann, donor2.CNhs12573.11746-123F912.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G321.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C459.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C815.65
Mouse hepatocyte, donor6.CNhs13090.11822-124F419.49
Mouse hepatocyte, donor8.CNhs13091.11824-124F619.71
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A725.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G153.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G269.17
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G341.45
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B618.73
accessory axillary lymph node, adult.CNhs10475.1063-29H922.27
adrenal gland, adult.CNhs10508.49-24D714.10
adrenal gland, embryo E14.CNhs11038.406-44C56.77
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I110.61
adrenal gland, embryo E18.CNhs11026.1262-18F59.65
adrenal gland, neonate N00.CNhs11191.1311-23C115.52
adrenal gland, neonate N25.CNhs11223.1377-27I39.17
amnion, adult pregnant day17.5.CNhs10488.583-22A855.12
aorta, adult.CNhs10498.46-23H128.05
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F522.32
bone (os femoris), neonate N16.CNhs11225.1525-43A630.70
bone (os femoris), neonate N20.CNhs11195.1350-25C332.49
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I26.91
colon, adult.CNhs10468.36-18H710.22
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.12
corpora quadrigemina, adult.CNhs10501.16-22A411.68
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D56.43
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F27.69
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A225.01
epididymis, adult.CNhs10490.58-23B220.47
eyeball, adult.CNhs10484.31-12G417.47
eyeball, embryo E12.CNhs11016.345-16C64.16
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C97.74
eyeball, embryo E17.CNhs11023.1261-18D48.29
eyeball, neonate N00.CNhs11207.633-15C69.87
eyeball, neonate N01.CNhs11140.1532-43E76.66
eyeball, neonate N02.CNhs11205.1551-44G85.90
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E23.66
forelimb, embryo E12.CNhs10600.359-14H26.43
forelimb, embryo E13.CNhs10589.384-1E26.69
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E717.52
forelimb, embryo E17.CNhs10598.1517-43C421.94
forelimb, embryo E18.CNhs11008.1520-43B531.28
gonad, embryo E13.CNhs11044.1564-45I68.36
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E918.23
heart, embryo E12.CNhs11015.353-12F520.17
heart, embryo E13.CNhs11013.376-3I922.51
heart, embryo E14.CNhs10597.403-26D421.78
heart, embryo E15.CNhs11017.431-16C823.61
heart, embryo E16.CNhs11021.457-17C624.99
heart, embryo E17.CNhs11025.479-18E521.16
heart, embryo E18.CNhs11030.1283-20G319.32
heart, neonate N00.CNhs11213.639-21E323.82
heart, neonate N03.CNhs11221.1349-25I220.41
heart, neonate N10.CNhs11118.749-24G119.54
heart, neonate N16.CNhs11209.782-15G119.86
heart, neonate N20.CNhs11127.821-26I618.27
heart, neonate N25.CNhs11196.1351-25D320.86
heart, neonate N30.CNhs11202.1390-42D223.35
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I325.11
intestine, adult.CNhs10496.178-9A321.68
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D89.79
intestine, embryo E16.CNhs10585.463-22H49.68
intestine, embryo E17.CNhs10582.482-18D314.45
intestine, embryo E18.CNhs10526.1289-20F714.08
intestine, neonate N00.CNhs11126.644-26D118.51
intestine, neonate N01.CNhs11192.1322-23E926.02
intestine, neonate N06.CNhs11102.688-20B820.61
intestine, neonate N07.CNhs11095.720-20F224.67
intestine, neonate N10.CNhs11098.755-23A525.74
intestine, neonate N20.CNhs11187.827-18D115.28
intestine, neonate N25.CNhs11121.1352-25E331.34
intestine, neonate N30.CNhs11131.1384-42G125.49
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F88.23
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I26.72
kidney, embryo E18.CNhs11001.1288-20C76.59
kidney, neonate N00.CNhs11214.646-21G710.73
kidney, neonate N10.CNhs11206.758-6D511.51
kidney, neonate N20.CNhs11113.832-19I115.50
kidney, neonate N25.CNhs11122.1353-25F318.68
kidney, neonate N30.CNhs11203.1385-42H117.77
liver, adult pregnant day01.CNhs10466.508-5B213.93
liver, embryo E12.CNhs10601.355-15F824.19
liver, embryo E13.CNhs10524.378-3H620.05
liver, embryo E14.CNhs10594.409-16E128.11
liver, embryo E15.CNhs10520.433-16D736.72
liver, embryo E16.CNhs10523.462-17F530.63
liver, embryo E17.CNhs10510.481-18A323.17
liver, embryo E18.CNhs10579.499-43G423.02
liver, neonate N00.CNhs11117.641-24F432.10
liver, neonate N03.CNhs11123.1345-25G223.61
liver, neonate N06.CNhs11101.684-20A830.19
liver, neonate N07.CNhs11103.716-20H223.82
liver, neonate N10.CNhs11115.751-24B917.16
liver, neonate N20.CNhs11220.823-25A314.90
liver, neonate N25.CNhs11198.1368-26H117.58
liver, neonate N30.CNhs11106.1382-42D128.46
lung, adult.CNhs10474.28-22B119.21
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F86.19
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A66.70
lung, embryo E18.CNhs10583.1287-20I67.38
lung, neonate N00.CNhs11224.640-42C617.17
lung, neonate N06.CNhs11212.683-20E512.93
lung, neonate N07.CNhs11111.715-19A317.05
lung, neonate N10.CNhs11219.750-23E611.80
lung, neonate N20.CNhs11109.822-18A418.19
lung, neonate N25.CNhs11119.1359-25C714.33
lung, neonate N30.CNhs11133.1394-42H221.12
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H26.62
medulla oblongata, adult.CNhs10477.17-12C217.34
medulla oblongata, neonate N30.CNhs11200.1396-42A314.42
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.20
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C234.59
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I711.78
ovary, embryo E18.CNhs11040.505-44H76.59
ovary, neonate N00.CNhs11217.1299-22I413.85
oviduct, adult pregnant day01.CNhs10500.988-6G612.70
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F47.28
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E59.05
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G914.99
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D811.41
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G813.96
pituitary gland, embryo E12.CNhs11018.346-16E64.86
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A54.07
pituitary gland, embryo E15.CNhs10592.427-16B95.85
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I714.31
placenta, adult pregnant day17.CNhs10464.577-18G326.06
prostate, adult.CNhs10470.859-1F87.94
skin, adult.CNhs10492.30-1C354.41
skin, neonate N00.CNhs11124.650-25G443.43
skin, neonate N03.CNhs11215.662-22H332.09
skin, neonate N06.CNhs11097.693-20I542.97
skin, neonate N10.CNhs11108.762-6C446.12
small intestine, neonate N16.CNhs11114.790-21I127.98
spinal cord, adult.CNhs10505.24-13C919.28
spleen, adult.CNhs10465.25-2G230.42
spleen, embryo E16.CNhs11035.461-43C18.46
spleen, embryo E18.CNhs11011.1271-21F225.00
spleen, neonate N10.CNhs11116.752-24D159.52
spleen, neonate N20.CNhs11112.824-19H160.01
spleen, neonate N25.CNhs11099.1354-25G348.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C628.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C924.77
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D328.75
stomach, adult.CNhs10503.33-1H627.69
stomach, embryo E12.CNhs10588.356-43E34.59
stomach, embryo E15.CNhs10603.1252-16G810.37
stomach, embryo E16.CNhs11022.459-17D418.36
stomach, embryo E17.CNhs11006.1035-18D527.18
stomach, embryo E18.CNhs10999.1286-20C625.99
stomach, neonate N03.CNhs11193.1340-24B827.38
stomach, neonate N07.CNhs11210.718-18A924.63
stomach, neonate N25.CNhs11104.1355-25E428.01
stomach, neonate N30.CNhs11134.1386-42I128.77
submandibular gland, adult.CNhs10469.59-29C121.75
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F57.92
testis, embryo E15.CNhs11034.443-27C56.29
testis, embryo E16.CNhs11033.470-26G58.75
testis, embryo E17.CNhs11029.486-18I58.91
testis, embryo E18.CNhs11027.503-18G513.01
testis, neonate N00.CNhs11189.1300-22B713.38
testis, neonate N07.CNhs11222.726-26I49.50
testis, neonate N10.CNhs11204.763-44D95.56
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E26.91
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I46.28
thymus, embryo E15.CNhs11005.430-45I25.75
thymus, embryo E16.CNhs11002.456-26C54.94
thymus, embryo E17.CNhs10581.478-18C17.88
thymus, embryo E18.CNhs10595.1273-19G48.54
thymus, neonate N02.CNhs11181.1541-43F811.42
thymus, neonate N03.CNhs11137.2104-43C713.74
thymus, neonate N06.CNhs11197.681-26C415.25
thymus, neonate N07.CNhs11211.713-19D313.11
thymus, neonate N10.CNhs11194.748-24E411.60
thymus, neonate N20.CNhs11186.820-7A212.86
thymus, neonate N25.CNhs11125.1362-25G714.14
thymus, neonate N30.CNhs11132.1393-42G216.48
tongue, adult.CNhs10499.32-1B494.77
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H323.53
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F730.50
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G530.56
urinary bladder, adult.CNhs10481.879-12E429.36
uterus, adult pregnant day19.CNhs10497.590-15F515.20
uterus, adult.CNhs10509.92-27E514.10
vagina, adult.CNhs10502.89-27D560.67
vesicular gland, adult.CNhs10491.51-27F812.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I86.23
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H25.63
whole body, embryo E14.5.CNhs10578.420-27D213.61
whole body, embryo E14.CNhs10519.395-14B112.58
whole body, embryo E16.CNhs10514.453-14F211.40
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.86
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.88
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.02
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.47
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.07
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.44
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.47
whole body, embryo E17.5.CNhs10513.490-9F913.31
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B311.93
whole body, neonate N00.CNhs10525.657-19C221.27
whole body, neonate N01.CNhs10576.659-23C623.15
whole body, neonate N06.CNhs10515.692-21D120.29
whole body, neonate N10.CNhs10518.761-6B421.56





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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