FFCP PHASE1:Mm9::chr2:105500957..105500969,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=133 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:105500957..105500969,+ | |||
|description=CAGE_peak_at_chr2:105500957..105500969,+ | |description=CAGE_peak_at_chr2:105500957..105500969,+ | ||
|id=chr2:105500957..105500969,+ | |id=chr2:105500957..105500969,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!2.34e-30!9;UBERON:0000019!2.34e-30!9;UBERON:0000047!2.34e-30!9;UBERON:0004088!2.34e-30!9;UBERON:0002104!2.34e-30!9;UBERON:0001456!2.34e-30!9;UBERON:0003072!2.34e-30!9;UBERON:0003071!2.34e-30!9;UBERON:0004128!2.34e-30!9;UBERON:0001444!1.50e-24!11;UBERON:0000020!2.25e-22!12;UBERON:0001032!2.25e-22!12;UBERON:0004456!2.25e-22!12;UBERON:0005085!1.57e-20!13;UBERON:0003056!1.01e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.75e-62,9;UBERON:0000019,2.75e-62,9;UBERON:0000047,2.75e-62,9;UBERON:0010312,2.75e-62,9;UBERON:0004088,2.75e-62,9;UBERON:0002104,2.75e-62,9;UBERON:0001456,2.75e-62,9;UBERON:0003072,2.75e-62,9;UBERON:0004128,2.75e-62,9;UBERON:0003071,2.75e-62,9;UBERON:0001444,5.89e-51,11;UBERON:0000020,1.05e-46,12;UBERON:0001032,1.05e-46,12;UBERON:0004456,1.05e-46,12;UBERON:0000033,4.18e-43,13;UBERON:0005085,4.18e-43,13;UBERON:0007811,2.04e-15,36;UBERON:0003056,3.63e-14,49;UBERON:0000153,7.53e-13,43;UBERON:0002346,9.81e-11,64;UBERON:0003075,9.81e-11,64;UBERON:0007284,9.81e-11,64;UBERON:0010371,2.40e-09,73;UBERON:0010314,2.71e-07,92;UBERON:0004121,4.82e-07,95;UBERON:0000924,4.82e-07,95;UBERON:0006601,4.82e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,4.42409506073193,4.13823787980251,4.86167750474443,6.63101198477146,1.76894897793452,2.94661556655154,1.96773621575431,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0.44449345560323,0,0,0,0.50695859978048,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,1.02860775715625,0.177475806159338,0,0,0.188218760830661,0.25384382367503,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.29551344712669,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,4.42409506073193,4.13823787980251,4.86167750474443,6.63101198477146,1.76894897793452,2.94661556655154,1.96773621575431,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0.44449345560323,0,0,0,0.50695859978048,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,1.02860775715625,0.177475806159338,0,0,0.188218760830661,0.25384382367503,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.29551344712669,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:105500957..105500969,+ | |short_description=p@chr2:105500957..105500969,+ | ||
}} | }} |
Latest revision as of 08:12, 6 August 2015
Short description: | p@chr2:105500957..105500969, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:105500957..105500969, + |
Coexpression cluster: | MCL_coexpression_mm9:133 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 2.75e-62 | 9 |
camera-type eye | 2.75e-62 | 9 |
simple eye | 2.75e-62 | 9 |
immature eye | 2.75e-62 | 9 |
ocular region | 2.75e-62 | 9 |
visual system | 2.75e-62 | 9 |
face | 2.75e-62 | 9 |
optic cup | 2.75e-62 | 9 |
optic vesicle | 2.75e-62 | 9 |
eye primordium | 2.75e-62 | 9 |
subdivision of head | 5.89e-51 | 11 |
sense organ | 1.05e-46 | 12 |
sensory system | 1.05e-46 | 12 |
entire sense organ system | 1.05e-46 | 12 |
head | 4.18e-43 | 13 |
ectodermal placode | 4.18e-43 | 13 |
craniocervical region | 2.04e-15 | 36 |
pre-chordal neural plate | 3.63e-14 | 49 |
anterior region of body | 7.53e-13 | 43 |
neurectoderm | 9.81e-11 | 64 |
neural plate | 9.81e-11 | 64 |
presumptive neural plate | 9.81e-11 | 64 |
ecto-epithelium | 2.40e-09 | 73 |
structure with developmental contribution from neural crest | 2.71e-07 | 92 |
ectoderm-derived structure | 4.82e-07 | 95 |
ectoderm | 4.82e-07 | 95 |
presumptive ectoderm | 4.82e-07 | 95 |