FFCP PHASE1:Mm9::chr3:26229959..26229976,-: Difference between revisions
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|id=chr3:26229959..26229976,-
|short_description=p@chr3:26229959..26229976,-
|description=CAGE_peak_at_chr3:26229959..26229976,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=133 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:26229959..26229976,- | |||
|description=CAGE_peak_at_chr3:26229959..26229976,- | |||
|id=chr3:26229959..26229976,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.73e-21!63;UBERON:0002346!1.40e-19!71;UBERON:0003075!1.40e-19!71;UBERON:0007284!1.40e-19!71;UBERON:0003056!2.21e-18!49;UBERON:0000970!2.25e-15!9;UBERON:0000019!2.25e-15!9;UBERON:0000047!2.25e-15!9;UBERON:0004088!2.25e-15!9;UBERON:0002104!2.25e-15!9;UBERON:0001456!2.25e-15!9;UBERON:0003072!2.25e-15!9;UBERON:0003071!2.25e-15!9;UBERON:0004128!2.25e-15!9;UBERON:0004121!2.88e-14!102;UBERON:0000924!2.88e-14!102;UBERON:0006601!2.88e-14!102;UBERON:0001049!7.82e-14!52;UBERON:0005068!7.82e-14!52;UBERON:0006241!7.82e-14!52;UBERON:0007135!7.82e-14!52;UBERON:0007811!4.37e-13!86;UBERON:0000955!4.52e-13!50;UBERON:0006238!4.52e-13!50;UBERON:0001444!3.94e-12!11;UBERON:0002616!4.20e-12!49;UBERON:0001017!2.21e-11!73;UBERON:0005743!2.21e-11!73;UBERON:0000153!3.70e-11!94;UBERON:0000020!6.43e-11!12;UBERON:0001032!6.43e-11!12;UBERON:0004456!6.43e-11!12;UBERON:0000073!7.36e-11!75;UBERON:0001016!7.36e-11!75;UBERON:0005085!6.79e-10!13;UBERON:0002020!1.06e-09!34;UBERON:0003080!1.16e-08!40;UBERON:0002791!8.28e-08!29;UBERON:0003528!8.28e-08!29;UBERON:0001893!8.28e-08!29;UBERON:0002780!8.42e-08!39;UBERON:0001890!8.42e-08!39;UBERON:0006240!8.42e-08!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.88e-52,9;UBERON:0000019,1.88e-52,9;UBERON:0000047,1.88e-52,9;UBERON:0010312,1.88e-52,9;UBERON:0004088,1.88e-52,9;UBERON:0002104,1.88e-52,9;UBERON:0001456,1.88e-52,9;UBERON:0003072,1.88e-52,9;UBERON:0004128,1.88e-52,9;UBERON:0003071,1.88e-52,9;UBERON:0001444,7.40e-43,11;UBERON:0000020,2.95e-39,12;UBERON:0001032,2.95e-39,12;UBERON:0004456,2.95e-39,12;UBERON:0000033,3.30e-36,13;UBERON:0005085,3.30e-36,13;UBERON:0003056,1.09e-20,49;UBERON:0002346,1.23e-15,64;UBERON:0003075,1.23e-15,64;UBERON:0007284,1.23e-15,64;UBERON:0010371,1.35e-13,73;UBERON:0007811,9.50e-13,36;UBERON:0010314,1.38e-10,92;UBERON:0000153,1.43e-10,43;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0002021,5.70e-07,10;UBERON:0000411,5.70e-07,10;UBERON:0001950,5.70e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0.274462930807229,0,0,0,0.61119299110724,0.589257170947335,0.854230084794618,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0.748953197024114,0.457500602818626,0.125654352112864,0.347648640384553,0,0.20778804455956,0.648965052271031,0,0,0,0.420883711772948,6.11566081924707,4.59804208866946,4.32149111532838,4.21973489940002,3.40182495756639,3.71529788826064,1.78033276663485,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.514523061896422,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,1.14579102687879,0.171853182343688,0,0,1.35004500046361,1.35096360967266,0,0.51776031175182,0,0,0.170733605754134,0.486213434136588,0,0,0,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.468207537349412,0.384150914429216,0.17230640686684,0.476293691283074,0,0,0.412085900803307,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0.561142271657738,0,0,0,0.309873682371932,0.192906610981141,0.749431733813838,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0.274462930807229,0,0,0,0.61119299110724,0.589257170947335,0.854230084794618,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0.748953197024114,0.457500602818626,0.125654352112864,0.347648640384553,0,0.20778804455956,0.648965052271031,0,0,0,0.420883711772948,6.11566081924707,4.59804208866946,4.32149111532838,4.21973489940002,3.40182495756639,3.71529788826064,1.78033276663485,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.514523061896422,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,1.14579102687879,0.171853182343688,0,0,1.35004500046361,1.35096360967266,0,0.51776031175182,0,0,0.170733605754134,0.486213434136588,0,0,0,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.468207537349412,0.384150914429216,0.17230640686684,0.476293691283074,0,0,0.412085900803307,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0.561142271657738,0,0,0,0.309873682371932,0.192906610981141,0.749431733813838,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr3:26229959..26229976,- | |||
}} | }} |
Latest revision as of 08:13, 6 August 2015
Short description: | p@chr3:26229959..26229976, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:26229959..26229976, - |
Coexpression cluster: | MCL_coexpression_mm9:133 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.88e-52 | 9 |
camera-type eye | 1.88e-52 | 9 |
simple eye | 1.88e-52 | 9 |
immature eye | 1.88e-52 | 9 |
ocular region | 1.88e-52 | 9 |
visual system | 1.88e-52 | 9 |
face | 1.88e-52 | 9 |
optic cup | 1.88e-52 | 9 |
optic vesicle | 1.88e-52 | 9 |
eye primordium | 1.88e-52 | 9 |
subdivision of head | 7.40e-43 | 11 |
sense organ | 2.95e-39 | 12 |
sensory system | 2.95e-39 | 12 |
entire sense organ system | 2.95e-39 | 12 |
head | 3.30e-36 | 13 |
ectodermal placode | 3.30e-36 | 13 |
pre-chordal neural plate | 1.09e-20 | 49 |
neurectoderm | 1.23e-15 | 64 |
neural plate | 1.23e-15 | 64 |
presumptive neural plate | 1.23e-15 | 64 |
ecto-epithelium | 1.35e-13 | 73 |
craniocervical region | 9.50e-13 | 36 |
structure with developmental contribution from neural crest | 1.38e-10 | 92 |
anterior region of body | 1.43e-10 | 43 |
ectoderm-derived structure | 3.22e-10 | 95 |
ectoderm | 3.22e-10 | 95 |
presumptive ectoderm | 3.22e-10 | 95 |
occipital lobe | 5.70e-07 | 10 |
visual cortex | 5.70e-07 | 10 |
neocortex | 5.70e-07 | 10 |