FFCP PHASE1:Mm9::chr19:12638953..12638980,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=177 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:12638953..12638980,+ | |||
|description=CAGE_peak_at_chr19:12638953..12638980,+ | |description=CAGE_peak_at_chr19:12638953..12638980,+ | ||
|id=chr19:12638953..12638980,+ | |id=chr19:12638953..12638980,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.79e-11,6;CL:0000556,1.79e-11,6;CL:0000050,1.62e-07,9;CL:0000763,3.99e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.29e-09,3;DOID:4045,1.29e-09,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.53e-15,6;UBERON:0004457,2.53e-15,6;UBERON:0000042,2.53e-15,6;UBERON:0004854,2.53e-15,6;UBERON:0009034,2.53e-15,6;UBERON:0002095,2.53e-15,6;UBERON:0004782,2.53e-15,6;UBERON:0003281,2.53e-15,6;UBERON:0009664,2.53e-15,6;UBERON:0002296,2.53e-15,6;UBERON:0005602,2.53e-15,6;UBERON:0001179,2.53e-15,6;UBERON:0006293,2.53e-15,6;UBERON:0002193,4.91e-12,48;UBERON:0002405,4.91e-12,48;UBERON:0003887,6.03e-12,10;UBERON:0002204,9.50e-10,32;UBERON:0002465,1.05e-08,3;UBERON:0002390,2.28e-08,45;UBERON:0003061,2.28e-08,45;UBERON:0001474,3.97e-08,22;UBERON:0004765,3.97e-08,22;UBERON:0001434,3.97e-08,22;UBERON:0002371,3.99e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0.0874204024189974,1.33243904726265,4.04950534779652,0,19.4009231695316,23.5836825801871,17.8243653755173,0.17008658030214,1.48936426801328,2.08959831311148,3.83981814704176,1.60586496747019,0,0,0,0,0,0,0,0,0,0,0,0,18.8339233831608,23.440060335714,23.0350447348471,13.5293242247133,17.7591826089196,17.4783727091215,0,0,0,0,0,0,0,0,0,5.70460860596304,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,19.9382170408322,0.445326417194474,0,0.304465478312141,0,0,0,0,0,1.15679485535929,4.42305275974937,0.161766849947409,1.98757366614354,0.484875253135222,0,0,0,0,0.718890747035522,0,0.508280908292259,0,0,0,0,0,0,0,0,1.7416975885413,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0.702213187313235,1.02939162845886,1.13665399758237,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.449724224769707,0.405720242777006,0.482354319504834,0.50925170356284,1.72617682470486,0.324270453550071,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.318909537314974,0.655453258862952,0.690739927463582,0.144649058581512,0,0,1.47529281905711,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0.824850614862677,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0.49465875882444,0.161464426695906,0,0,0,0.582961673259701,0,5.12612642393558,2.47664241555867,2.59272338317596,1.50694765603753,3.14396723758358,3.88922894451088,0,0.419854356970974,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0,0.259229946583586,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0.584747284438515,0,0.233753804363138,0,0,0,0,0.386379188064381,0.375364950902364,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0,0,0,0.38581844092741,0,0.147198920134397,1.37147700954166,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0.561142271657738,0,0,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0.695603506861264 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|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0.0874204024189974,1.33243904726265,4.04950534779652,0,19.4009231695316,23.5836825801871,17.8243653755173,0.17008658030214,1.48936426801328,2.08959831311148,3.83981814704176,1.60586496747019,0,0,0,0,0,0,0,0,0,0,0,0,18.8339233831608,23.440060335714,23.0350447348471,13.5293242247133,17.7591826089196,17.4783727091215,0,0,0,0,0,0,0,0,0,5.70460860596304,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,19.9382170408322,0.445326417194474,0,0.304465478312141,0,0,0,0,0,1.15679485535929,4.42305275974937,0.161766849947409,1.98757366614354,0.484875253135222,0,0,0,0,0.718890747035522,0,0.508280908292259,0,0,0,0,0,0,0,0,1.7416975885413,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0.702213187313235,1.02939162845886,1.13665399758237,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.449724224769707,0.405720242777006,0.482354319504834,0.50925170356284,1.72617682470486,0.324270453550071,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.318909537314974,0.655453258862952,0.690739927463582,0.144649058581512,0,0,1.47529281905711,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0.824850614862677,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0.49465875882444,0.161464426695906,0,0,0,0.582961673259701,0,5.12612642393558,2.47664241555867,2.59272338317596,1.50694765603753,3.14396723758358,3.88922894451088,0,0.419854356970974,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0,0.259229946583586,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0.584747284438515,0,0.233753804363138,0,0,0,0,0.386379188064381,0.375364950902364,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0,0,0,0.38581844092741,0,0.147198920134397,1.37147700954166,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0.561142271657738,0,0,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0.695603506861264 | ||
|short_description=p@chr19:12638953..12638980,+ | |short_description=p@chr19:12638953..12638980,+ | ||
}} | }} |
Latest revision as of 08:23, 6 August 2015
Short description: | p@chr19:12638953..12638980, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:12638953..12638980, + |
Coexpression cluster: | MCL_coexpression_mm9:177 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.79e-11 | 6 |
megakaryocyte | 1.79e-11 | 6 |
megakaryocyte-erythroid progenitor cell | 1.62e-07 | 9 |
myeloid cell | 3.99e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.53e-15 | 6 |
cavity lining | 2.53e-15 | 6 |
serous membrane | 2.53e-15 | 6 |
gastrointestinal system mesentery | 2.53e-15 | 6 |
stomach region | 2.53e-15 | 6 |
mesentery | 2.53e-15 | 6 |
gastrointestinal system serosa | 2.53e-15 | 6 |
mesentery of stomach | 2.53e-15 | 6 |
gut mesentery | 2.53e-15 | 6 |
dorsal mesentery | 2.53e-15 | 6 |
dorsal mesogastrium | 2.53e-15 | 6 |
peritoneal cavity | 2.53e-15 | 6 |
spleen primordium | 2.53e-15 | 6 |
hemolymphoid system | 4.91e-12 | 48 |
immune system | 4.91e-12 | 48 |
intraembryonic coelom | 6.03e-12 | 10 |
musculoskeletal system | 9.50e-10 | 32 |
lymphoid system | 1.05e-08 | 3 |
hematopoietic system | 2.28e-08 | 45 |
blood island | 2.28e-08 | 45 |
bone element | 3.97e-08 | 22 |
skeletal element | 3.97e-08 | 22 |
skeletal system | 3.97e-08 | 22 |
bone marrow | 3.99e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.29e-09 | 3 |
muscle cancer | 1.29e-09 | 3 |