FFCP PHASE1:Mm9::chr19:20567527..20567549,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2251 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:20567527..20567549,+ | |||
|description=CAGE_peak_at_chr19:20567527..20567549,+ | |description=CAGE_peak_at_chr19:20567527..20567549,+ | ||
|id=chr19:20567527..20567549,+ | |id=chr19:20567527..20567549,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,3.08e-07,3;CL:0000737,3.08e-07,3;CL:0000746,3.08e-07,3;CL:0000513,3.08e-07,3;CL:0002614,9.47e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.13e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.53e-09,51;UBERON:0002950,1.46e-08,4;UBERON:0001891,1.46e-08,4;UBERON:0009616,1.46e-08,4;UBERON:0010286,1.46e-08,4;UBERON:0002038,9.47e-07,3;UBERON:0009663,9.47e-07,3;UBERON:0009661,9.47e-07,3;UBERON:0000125,9.47e-07,3;UBERON:0002308,9.47e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.52065396829272,0.917733760808408,0,0,0.878744730937887,0.388859798148567,0.279972843250725,0,0,0,0,8.7468208252222,16.0458726365704,4.64104883049698,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,2.20231761998777,2.042997409363,1.38245879930619,0,0,0,6.70039197603314,2.8138130501584,3.66715794664344,0,0,0,0,0,0,0,0,0,0,0,2.94933282276679,0,0,0,0.14084341977668,0,0,0,0,0,0,1.25602267690966,0,1.1875371125186,0,0,0,0,0.117588707135705,0,1.73036477414062,1.15679485535929,0,0.323533699894818,1.98757366614354,0.484875253135222,1.86391761218122,6.44117753425404,6.49284791121711,0,0,0,0,6.44099749440738,1.37250180845588,0,0.347648640384553,1.02286182932132,3.74018480207208,4.2182728397617,0.611036183101898,3.11017426525233,1.51633655060205,1.26265113531884,0,0,0,0,0.544291993210623,0.12811372028485,0,2.32833033665114,0,0,0,0,0,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.405344047729279,0.584799949701329,0.439100230582101,0.402619256281115,1.05144974282064,0,0,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0.667134131534611,0.570676878337677,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.796565093017469,0,0,0,0,0,0,0,0,0.31399745568275,0.123397163921801,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0.252578877947112,0.358794827043824,0.482443521363367,1.84753190166605,0,0,0,0,0.167506257441816,0,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,1.14704320301017,1.72684981865896,5.20736610893442,0,0,0,0.827810238914197,17.8211154886449,15.2375192569864,0,8.07906967053994,0,0,0,0,0,0,0,0,0,0.321321316421807,1.13552068166615,0,0.162886959353576,0.824850614862677,1.32745138339963,0,0,0.377210159511796,0.295301892880773,0.614870295887855,0,0,0.712994756769443,0.632073515871632,1.05418608574999,2.06271086496374,0.340439605753788,0,0,0,0,0,0,0,0,0,0.661585194164886,8.244312647074,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,20.5822085231666,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0,0,0.216010681643603,0.418176592028937,0.655087691238533,0.809186078308924,0.330613822901344,1.04702376793612,0.648074866458964,0.621339313086926,2.25477175473676,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,1.99232754408851,2.89900944991207,4.89651010638371,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,3.40095575422817,0,0,0,0.579568782096571,0.750729901804728,0.36630324853453,0,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,0.859265911718438,0.685082519770642,0.755393897389701,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.192075457214608,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.365855945745545,0.526139422875686,0,0,0,0.29551344712669,0,0,0.192906610981141,0,0.467863216890817,0,0,0.661774257358546,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.52065396829272,0.917733760808408,0,0,0.878744730937887,0.388859798148567,0.279972843250725,0,0,0,0,8.7468208252222,16.0458726365704,4.64104883049698,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,2.20231761998777,2.042997409363,1.38245879930619,0,0,0,6.70039197603314,2.8138130501584,3.66715794664344,0,0,0,0,0,0,0,0,0,0,0,2.94933282276679,0,0,0,0.14084341977668,0,0,0,0,0,0,1.25602267690966,0,1.1875371125186,0,0,0,0,0.117588707135705,0,1.73036477414062,1.15679485535929,0,0.323533699894818,1.98757366614354,0.484875253135222,1.86391761218122,6.44117753425404,6.49284791121711,0,0,0,0,6.44099749440738,1.37250180845588,0,0.347648640384553,1.02286182932132,3.74018480207208,4.2182728397617,0.611036183101898,3.11017426525233,1.51633655060205,1.26265113531884,0,0,0,0,0.544291993210623,0.12811372028485,0,2.32833033665114,0,0,0,0,0,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.405344047729279,0.584799949701329,0.439100230582101,0.402619256281115,1.05144974282064,0,0,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0.667134131534611,0.570676878337677,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.796565093017469,0,0,0,0,0,0,0,0,0.31399745568275,0.123397163921801,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0.252578877947112,0.358794827043824,0.482443521363367,1.84753190166605,0,0,0,0,0.167506257441816,0,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,1.14704320301017,1.72684981865896,5.20736610893442,0,0,0,0.827810238914197,17.8211154886449,15.2375192569864,0,8.07906967053994,0,0,0,0,0,0,0,0,0,0.321321316421807,1.13552068166615,0,0.162886959353576,0.824850614862677,1.32745138339963,0,0,0.377210159511796,0.295301892880773,0.614870295887855,0,0,0.712994756769443,0.632073515871632,1.05418608574999,2.06271086496374,0.340439605753788,0,0,0,0,0,0,0,0,0,0.661585194164886,8.244312647074,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,20.5822085231666,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0,0,0.216010681643603,0.418176592028937,0.655087691238533,0.809186078308924,0.330613822901344,1.04702376793612,0.648074866458964,0.621339313086926,2.25477175473676,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,1.99232754408851,2.89900944991207,4.89651010638371,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,3.40095575422817,0,0,0,0.579568782096571,0.750729901804728,0.36630324853453,0,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,0.859265911718438,0.685082519770642,0.755393897389701,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.192075457214608,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.365855945745545,0.526139422875686,0,0,0,0.29551344712669,0,0,0.192906610981141,0,0.467863216890817,0,0,0.661774257358546,0.695603506861264 | ||
|short_description=p@chr19:20567527..20567549,+ | |short_description=p@chr19:20567527..20567549,+ | ||
}} | }} |
Latest revision as of 09:20, 6 August 2015
Short description: | p@chr19:20567527..20567549, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:20567527..20567549, + |
Coexpression cluster: | MCL_coexpression_mm9:2251 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 3.08e-07 | 3 |
striated muscle cell | 3.08e-07 | 3 |
cardiac muscle cell | 3.08e-07 | 3 |
cardiac muscle myoblast | 3.08e-07 | 3 |
neuron of the substantia nigra | 9.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.53e-09 | 51 |
regional part of midbrain | 1.46e-08 | 4 |
midbrain | 1.46e-08 | 4 |
presumptive midbrain | 1.46e-08 | 4 |
midbrain neural tube | 1.46e-08 | 4 |
substantia nigra | 9.47e-07 | 3 |
telencephalic nucleus | 9.47e-07 | 3 |
midbrain nucleus | 9.47e-07 | 3 |
neural nucleus | 9.47e-07 | 3 |
nucleus of brain | 9.47e-07 | 3 |