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FFCP PHASE1:Mm9::chrX:70728964..70728983,+: Difference between revisions

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{{FFCP|EntrezGene=12111|HGNC=|MCL_coexpression_id=188|UniProt=P28653,Q3TNY9,Q6PG76|association_with_transcript=0bp_to_ENSMUST00000033741,ENSMUST00000130873,ENSMUST00000140803,ENSMUST00000169489,NM_007542,uc009tlw.2,uc009tlx.2,uc012hkf.1_5end|description=CAGE_peak_1_at_Bgn_5end|id=chrX:70728964..70728983,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!1.23e-07!33;UBERON:0004535!2.03e-07!23;UBERON:0001009!2.03e-07!23;UBERON:0000926!2.57e-07!193;UBERON:0004120!2.57e-07!193;UBERON:0006603!2.57e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.22e-07,33;UBERON:0004535,2.01e-07,23;UBERON:0001009,2.01e-07,23|phase1_expression=403.575094704081,0,0.909998478779072,0,0,0,0.233612640595526,0.387369970324729,0,0.234064526321993,0,0,0,0,11.9919514253639,8.09901069559304,0,2.36596624018678,1.09691546884591,1.69755860719212,357.011732054191,23.2340825810072,19.5899841854202,1.11994695955385,1.60586496747019,0,0,0,4.94060890586572,3.52842181663903,3.32595765982957,0,0,63.3926724061755,0,0,0,0,0.7813353445238,0,0.588231488031014,2.73218193983378,0.485510353031154,7700.98245874809,6560.50672693966,5269.9943480662,7902.93496925954,105.088125375375,307.121283462792,507.267606684805,1387.12545188572,416.882436658418,0.503347818173209,0,0.336093799142464,8093.12459825486,8185.40077873046,9312.52231443833,27.9196715986245,37.0293685490423,68.4537915786673,1986.98433605339,1960.00573062895,777.063405872488,860.313735433268,654.352185865358,1105.52440781291,318.90119341689,44.4828436803369,56.1624703459833,47.323116304061,181.102724112011,229.92415113063,30.2552274060936,40.9260161247869,37.6879702510109,33.0347642998166,28.3465890549117,23.8090126547177,40.2253177577091,56.8138266770964,45.3194632384381,46.902743832232,61.9038871034848,73.0375624373152,170.29532240378,132.832778185563,61.1390182306986,35.5155846732633,208.199648094194,1888.75700838013,933.559906524804,5.439770669662,35.0807074564581,72.1251823366913,67.2040330646003,494.223914443635,9070.30176760423,5327.95116840024,5378.88834277091,49.5768837613915,3280.02476270996,1217.96904579777,824.837375657864,1.5154372870785,0.253359865475099,0,218.662129662,1320.84214448422,834.244821544315,346.797168205506,700.270600117925,597.063522395935,533.105979634626,821.945062878577,477.281713870107,808.574739459137,3743.24355258575,966.879333281213,2508.68030898442,1248.4171038566,1816.34269824454,387.694863333694,48.6016123039168,37.0720671059815,272.572677907567,1.1981512450592,0.599902730993408,0.508280908292259,51.527979955259,41.632554856495,28.9005009859588,53.0164176586443,46.2844977767898,50.2847067834135,45.7520361851077,1658.96323712165,1826.91636340922,299.476468743905,428.249176728975,113.465026263478,208.061404512293,393.075629365077,615.026361587553,720.574562511713,823.771221431584,583.574340557991,737.822013347673,104.766044565361,152.419500615262,344.512301113012,605.199417232534,1362.1534739562,2663.78082172805,3450.7606454248,405.830870042908,0.702213187313235,0,0,238.608889960898,431.997002485179,436.4704369815,591.861838963026,477.153261987454,593.002781939082,522.038705964666,525.279319940454,636.020819873972,781.659287089032,1016.52493757776,861.437170234263,716.96473833383,1319.49619289921,1078.34857473959,67.9236533862131,96.0100033498724,20.4859645449955,177.446330231238,123.06732055883,157.456463521377,285.312559367115,231.129319218351,253.510969983152,334.416650705879,289.937256603697,358.05552757,339.051196671564,456.207190390359,385.63896432162,313.687973620323,402.016772766931,307.872408451252,222.480447817965,280.594346969494,411.383235206744,402.618675150186,415.83413248739,415.274189570576,814.866017383179,661.883903540536,811.369425484225,677.450429930685,434.896003936847,96.4364711039024,123.635607926205,91.9686039654052,111.573066763677,136.74744957962,201.918300462666,220.08754514987,231.529103834751,193.565796297597,201.275489138296,564.909958560788,442.781458149561,430.394408021878,343.546046894462,426.480072885217,2128.91101028979,205.787673182746,677.119477116618,683.054225159357,823.528081244354,1276.90020047896,1765.09359716979,994.596203131201,2181.03985385326,2272.67064517573,2096.83020784596,1715.48504175906,2212.09461770212,2622.4874320828,0,0,352.10321948163,361.753074405504,95.5276010427362,71.8507638810205,5406.246628632,940.454203836289,129.989386399498,159.689446417325,57.0872003991917,42.7754148335068,33.8653984605239,15.0030561318081,230.74209995469,184.705702199949,172.345471184684,130.456454467254,893.087016130426,1372.70773867087,1251.62339567288,1034.52764116077,180.533388142349,210.005250274059,178.673222166168,232.927273498534,556.939369973137,522.639751504677,477.317057481704,472.23031459128,449.543194143134,277.164236709711,270.925824037747,265.05834614784,140.261117570561,211.751846580821,334.133480210855,323.434585862673,401.143608498823,622.507173431226,660.99341575872,618.063846702637,204.399057723492,193.826344840395,250.961316986547,457.064693153783,1531.81301606406,1460.0552866608,1340.79016784323,1087.76174261052,287.983066590293,88.6332943610236,479.463691518775,405.137421811806,1007.27303436386,400.471339591973,469.544672221721,436.051198131632,18.0177135793487,19.1733489683411,16.4457968827264,926.03049947466,71.1755985557555,308.232312164303,339.568791543743,551.784013182183,606.829564650628,910.604066790309,880.424610386278,742.601607408692,431.877091008254,528.138416123887,37.7674268918407,489.068622109855,518.877826073458,928.115521966139,1096.43774150246,1404.02540282837,1587.9607961157,863.645684669921,504.897743409798,221.774222918274,216.022504693399,111.235914461119,262.529153800763,270.951505000814,106.275233195836,171.865627840782,140.865080539917,75.4827422985404,77.2416227123039,97.6345570998588,59.7461364175199,54.0428352333465,68.3179743985664,55.9952918346717,61.82788125405,707.625527263075,0.887943813496259,14.4439309141256,33.2411540400875,2381.64131522884,2634.49890790824,512.824547948342,785.660109324776,467.966773064994,22.0253218620656,21.1749608793301,31.5092532391668,25.6061241692095,7.53590771747707,18.1294535373528,16.2005400055633,28.3702358031259,22.6571204492102,15.5328093525546,36.3255716544618,229.439302205593,260.1980151693,734.668498980385,254.051153105115,465.675606903886,762.528523087342,753.882274437114,831.180752842802,744.445985856147,796.685439555024,745.262674816387,597.33917615038,651.904101786379,620.47537112749,636.328371554186,530.634328501493,560.980013108454,670.051674706177,625.448211651054,749.169316462133,655.240676340274,567.239695884677,721.063572912982,678.905070316195,645.101770566142,663.479757609546,828.669591029205,608.809842370998,999.394385822432,603.97087727017,536.455411017319,691.191231913605,553.43439671627,1013.53133409492,1399.43885760837,1293.40786309466,1512.90709155407,2493.44340851737,2932.32173435572,2208.07739861327|short_description=p1@Bgn}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:12111
|HGNC=
|MCL_coexpression_id=188
|TSSclassifier=NA
|UniProt=uniprot:P28653,uniprot:Q3TNY9,uniprot:Q6PG76
|association_with_transcript=0bp_to_ENSMUST00000033741,ENSMUST00000130873,ENSMUST00000140803,ENSMUST00000169489,NM_007542,uc009tlw.2,uc009tlx.2,uc012hkf.1_5end
|cluster_id=chrX:70728964..70728983,+
|description=CAGE_peak_1_at_Bgn_5end
|id=chrX:70728964..70728983,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004872!1.23e-07!33;UBERON:0004535!2.03e-07!23;UBERON:0001009!2.03e-07!23;UBERON:0000926!2.57e-07!193;UBERON:0004120!2.57e-07!193;UBERON:0006603!2.57e-07!193
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.22e-07,33;UBERON:0004535,2.01e-07,23;UBERON:0001009,2.01e-07,23
|phase1_expression=403.575094704081,0,0.909998478779072,0,0,0,0.233612640595526,0.387369970324729,0,0.234064526321993,0,0,0,0,11.9919514253639,8.09901069559304,0,2.36596624018678,1.09691546884591,1.69755860719212,357.011732054191,23.2340825810072,19.5899841854202,1.11994695955385,1.60586496747019,0,0,0,4.94060890586572,3.52842181663903,3.32595765982957,0,0,63.3926724061755,0,0,0,0,0.7813353445238,0,0.588231488031014,2.73218193983378,0.485510353031154,7700.98245874809,6560.50672693966,5269.9943480662,7902.93496925954,105.088125375375,307.121283462792,507.267606684805,1387.12545188572,416.882436658418,0.503347818173209,0,0.336093799142464,8093.12459825486,8185.40077873046,9312.52231443833,27.9196715986245,37.0293685490423,68.4537915786673,1986.98433605339,1960.00573062895,777.063405872488,860.313735433268,654.352185865358,1105.52440781291,318.90119341689,44.4828436803369,56.1624703459833,47.323116304061,181.102724112011,229.92415113063,30.2552274060936,40.9260161247869,37.6879702510109,33.0347642998166,28.3465890549117,23.8090126547177,40.2253177577091,56.8138266770964,45.3194632384381,46.902743832232,61.9038871034848,73.0375624373152,170.29532240378,132.832778185563,61.1390182306986,35.5155846732633,208.199648094194,1888.75700838013,933.559906524804,5.439770669662,35.0807074564581,72.1251823366913,67.2040330646003,494.223914443635,9070.30176760423,5327.95116840024,5378.88834277091,49.5768837613915,3280.02476270996,1217.96904579777,824.837375657864,1.5154372870785,0.253359865475099,0,218.662129662,1320.84214448422,834.244821544315,346.797168205506,700.270600117925,597.063522395935,533.105979634626,821.945062878577,477.281713870107,808.574739459137,3743.24355258575,966.879333281213,2508.68030898442,1248.4171038566,1816.34269824454,387.694863333694,48.6016123039168,37.0720671059815,272.572677907567,1.1981512450592,0.599902730993408,0.508280908292259,51.527979955259,41.632554856495,28.9005009859588,53.0164176586443,46.2844977767898,50.2847067834135,45.7520361851077,1658.96323712165,1826.91636340922,299.476468743905,428.249176728975,113.465026263478,208.061404512293,393.075629365077,615.026361587553,720.574562511713,823.771221431584,583.574340557991,737.822013347673,104.766044565361,152.419500615262,344.512301113012,605.199417232534,1362.1534739562,2663.78082172805,3450.7606454248,405.830870042908,0.702213187313235,0,0,238.608889960898,431.997002485179,436.4704369815,591.861838963026,477.153261987454,593.002781939082,522.038705964666,525.279319940454,636.020819873972,781.659287089032,1016.52493757776,861.437170234263,716.96473833383,1319.49619289921,1078.34857473959,67.9236533862131,96.0100033498724,20.4859645449955,177.446330231238,123.06732055883,157.456463521377,285.312559367115,231.129319218351,253.510969983152,334.416650705879,289.937256603697,358.05552757,339.051196671564,456.207190390359,385.63896432162,313.687973620323,402.016772766931,307.872408451252,222.480447817965,280.594346969494,411.383235206744,402.618675150186,415.83413248739,415.274189570576,814.866017383179,661.883903540536,811.369425484225,677.450429930685,434.896003936847,96.4364711039024,123.635607926205,91.9686039654052,111.573066763677,136.74744957962,201.918300462666,220.08754514987,231.529103834751,193.565796297597,201.275489138296,564.909958560788,442.781458149561,430.394408021878,343.546046894462,426.480072885217,2128.91101028979,205.787673182746,677.119477116618,683.054225159357,823.528081244354,1276.90020047896,1765.09359716979,994.596203131201,2181.03985385326,2272.67064517573,2096.83020784596,1715.48504175906,2212.09461770212,2622.4874320828,0,0,352.10321948163,361.753074405504,95.5276010427362,71.8507638810205,5406.246628632,940.454203836289,129.989386399498,159.689446417325,57.0872003991917,42.7754148335068,33.8653984605239,15.0030561318081,230.74209995469,184.705702199949,172.345471184684,130.456454467254,893.087016130426,1372.70773867087,1251.62339567288,1034.52764116077,180.533388142349,210.005250274059,178.673222166168,232.927273498534,556.939369973137,522.639751504677,477.317057481704,472.23031459128,449.543194143134,277.164236709711,270.925824037747,265.05834614784,140.261117570561,211.751846580821,334.133480210855,323.434585862673,401.143608498823,622.507173431226,660.99341575872,618.063846702637,204.399057723492,193.826344840395,250.961316986547,457.064693153783,1531.81301606406,1460.0552866608,1340.79016784323,1087.76174261052,287.983066590293,88.6332943610236,479.463691518775,405.137421811806,1007.27303436386,400.471339591973,469.544672221721,436.051198131632,18.0177135793487,19.1733489683411,16.4457968827264,926.03049947466,71.1755985557555,308.232312164303,339.568791543743,551.784013182183,606.829564650628,910.604066790309,880.424610386278,742.601607408692,431.877091008254,528.138416123887,37.7674268918407,489.068622109855,518.877826073458,928.115521966139,1096.43774150246,1404.02540282837,1587.9607961157,863.645684669921,504.897743409798,221.774222918274,216.022504693399,111.235914461119,262.529153800763,270.951505000814,106.275233195836,171.865627840782,140.865080539917,75.4827422985404,77.2416227123039,97.6345570998588,59.7461364175199,54.0428352333465,68.3179743985664,55.9952918346717,61.82788125405,707.625527263075,0.887943813496259,14.4439309141256,33.2411540400875,2381.64131522884,2634.49890790824,512.824547948342,785.660109324776,467.966773064994,22.0253218620656,21.1749608793301,31.5092532391668,25.6061241692095,7.53590771747707,18.1294535373528,16.2005400055633,28.3702358031259,22.6571204492102,15.5328093525546,36.3255716544618,229.439302205593,260.1980151693,734.668498980385,254.051153105115,465.675606903886,762.528523087342,753.882274437114,831.180752842802,744.445985856147,796.685439555024,745.262674816387,597.33917615038,651.904101786379,620.47537112749,636.328371554186,530.634328501493,560.980013108454,670.051674706177,625.448211651054,749.169316462133,655.240676340274,567.239695884677,721.063572912982,678.905070316195,645.101770566142,663.479757609546,828.669591029205,608.809842370998,999.394385822432,603.97087727017,536.455411017319,691.191231913605,553.43439671627,1013.53133409492,1399.43885760837,1293.40786309466,1512.90709155407,2493.44340851737,2932.32173435572,2208.07739861327
|short_description=p1@Bgn
}}

Revision as of 09:52, 6 August 2015

Short description:p1@Bgn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Bgn_5end
Coexpression cluster:MCL_coexpression_mm9:188
Association with transcript: 0bp_to_ENSMUST00000033741, ENSMUST00000130873, ENSMUST00000140803, ENSMUST00000169489, NM_007542, uc009tlw.2, uc009tlx.2, uc012hkf.1_5end
EntrezGene:12111
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Bgn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7403.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.10
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.37
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3357.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H223.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I919.59
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B94.94
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E963.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87700.98
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96560.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35269.99
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77902.93
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2105.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8307.12
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3507.27
Mouse Astrocytes, donor2.CNhs12078.11552-120C41387.13
Mouse Astrocytes, donor3.CNhs12107.11633-122C4416.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18093.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18185.40
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59312.52
Mouse Granule cells, donor1.CNhs12131.11713-123C327.92
Mouse Granule cells, donor2.CNhs12357.11731-123E337.03
Mouse Granule cells, donor3.CNhs12108.11636-122C768.45
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61986.98
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11960.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7777.06
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7860.31
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2654.35
Mouse Microglia, donor1.CNhs12629.11718-123C81105.52
Mouse Microglia, donor2.CNhs12634.11736-123E8318.90
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D544.48
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F556.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D947.32
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1181.10
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5229.92
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D230.26
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F240.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D637.69
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D333.03
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F328.35
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D723.81
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D440.23
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F456.81
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D845.32
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E446.90
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E561.90
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I673.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6170.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6132.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E161.14
Mouse Schwann, donor1.CNhs12507.11728-123D935.52
Mouse Schwann, donor2.CNhs12573.11746-123F9208.20
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31888.76
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7933.56
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C835.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F472.13
Mouse hepatocyte, donor8.CNhs13091.11824-124F667.20
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7494.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79070.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35327.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85378.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G649.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13280.02
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I81217.97
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6824.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6218.66
accessory axillary lymph node, adult.CNhs10475.1063-29H91320.84
adrenal gland, adult.CNhs10508.49-24D7834.24
adrenal gland, embryo E14.CNhs11038.406-44C5346.80
adrenal gland, embryo E16.CNhs11004.1254-43D6700.27
adrenal gland, embryo E17.CNhs11043.1263-45I1597.06
adrenal gland, embryo E18.CNhs11026.1262-18F5533.11
adrenal gland, neonate N00.CNhs11191.1311-23C1821.95
adrenal gland, neonate N25.CNhs11223.1377-27I3477.28
amnion, adult pregnant day17.5.CNhs10488.583-22A8808.57
aorta, adult.CNhs10498.46-23H13743.24
bone (os femoris), adult.CNhs10483.56-12G2966.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52508.68
bone (os femoris), neonate N16.CNhs11225.1525-43A61248.42
bone (os femoris), neonate N20.CNhs11195.1350-25C31816.34
cecum, adult.CNhs10467.37-13H4387.69
cerebellum, adult.CNhs10494.15-8B248.60
cerebellum, neonate N30.CNhs11135.1395-42I237.07
colon, adult.CNhs10468.36-18H7272.57
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A451.53
corpus striatum, adult.CNhs10487.19-21D841.63
corpus striatum, neonate N00.CNhs11226.630-43F128.90
cortex, adult.CNhs10473.12-14D553.02
cortex, neonate N30.CNhs11107.1392-42F246.28
diencephalon, adult.CNhs10482.20-12F250.28
diencephalon, neonate N30.CNhs11201.1388-42B245.75
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11658.96
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21826.92
epididymis, adult.CNhs10490.58-23B2299.48
eyeball, adult.CNhs10484.31-12G4428.25
eyeball, embryo E12.CNhs11016.345-16C6113.47
eyeball, embryo E14.CNhs10521.399-16E2208.06
eyeball, embryo E15.CNhs10593.426-16C9393.08
eyeball, embryo E17.CNhs11023.1261-18D4615.03
eyeball, neonate N00.CNhs11207.633-15C6720.57
eyeball, neonate N01.CNhs11140.1532-43E7823.77
eyeball, neonate N02.CNhs11205.1551-44G8583.57
eyeball, neonate N16.CNhs11188.777-19A2737.82
forelimb, embryo E11.CNhs10596.335-25E2104.77
forelimb, embryo E12.CNhs10600.359-14H2152.42
forelimb, embryo E13.CNhs10589.384-1E2344.51
forelimb, embryo E14.CNhs10577.413-26A8605.20
forelimb, embryo E15.CNhs11007.437-20E71362.15
forelimb, embryo E17.CNhs10598.1517-43C42663.78
forelimb, embryo E18.CNhs11008.1520-43B53450.76
gonad, embryo E13.CNhs11044.1564-45I6405.83
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E9238.61
heart, embryo E12.CNhs11015.353-12F5432.00
heart, embryo E13.CNhs11013.376-3I9436.47
heart, embryo E14.CNhs10597.403-26D4591.86
heart, embryo E15.CNhs11017.431-16C8477.15
heart, embryo E16.CNhs11021.457-17C6593.00
heart, embryo E17.CNhs11025.479-18E5522.04
heart, embryo E18.CNhs11030.1283-20G3525.28
heart, neonate N00.CNhs11213.639-21E3636.02
heart, neonate N03.CNhs11221.1349-25I2781.66
heart, neonate N10.CNhs11118.749-24G11016.52
heart, neonate N16.CNhs11209.782-15G1861.44
heart, neonate N20.CNhs11127.821-26I6716.96
heart, neonate N25.CNhs11196.1351-25D31319.50
heart, neonate N30.CNhs11202.1390-42D21078.35
hippocampus, adult.CNhs10478.13-16E867.92
hippocampus, neonate N00.CNhs11228.627-43G196.01
intestinal mucosa, adult.CNhs10506.860-29I320.49
intestine, adult.CNhs10496.178-9A3177.45
intestine, embryo E12.CNhs11019.1251-16I5123.07
intestine, embryo E13.CNhs11010.381-16D5157.46
intestine, embryo E15.CNhs10602.976-16D8285.31
intestine, embryo E16.CNhs10585.463-22H4231.13
intestine, embryo E17.CNhs10582.482-18D3253.51
intestine, embryo E18.CNhs10526.1289-20F7334.42
intestine, neonate N00.CNhs11126.644-26D1289.94
intestine, neonate N01.CNhs11192.1322-23E9358.06
intestine, neonate N06.CNhs11102.688-20B8339.05
intestine, neonate N07.CNhs11095.720-20F2456.21
intestine, neonate N10.CNhs11098.755-23A5385.64
intestine, neonate N20.CNhs11187.827-18D1313.69
intestine, neonate N25.CNhs11121.1352-25E3402.02
intestine, neonate N30.CNhs11131.1384-42G1307.87
kidney, embryo E14.CNhs10606.411-4I9222.48
kidney, embryo E15.CNhs10997.434-16F8280.59
kidney, embryo E16.CNhs10584.464-22A5411.38
kidney, embryo E17.CNhs11028.483-18I2402.62
kidney, embryo E18.CNhs11001.1288-20C7415.83
kidney, neonate N00.CNhs11214.646-21G7415.27
kidney, neonate N10.CNhs11206.758-6D5814.87
kidney, neonate N20.CNhs11113.832-19I1661.88
kidney, neonate N25.CNhs11122.1353-25F3811.37
kidney, neonate N30.CNhs11203.1385-42H1677.45
liver, adult pregnant day01.CNhs10466.508-5B2434.90
liver, embryo E12.CNhs10601.355-15F896.44
liver, embryo E13.CNhs10524.378-3H6123.64
liver, embryo E14.CNhs10594.409-16E191.97
liver, embryo E15.CNhs10520.433-16D7111.57
liver, embryo E16.CNhs10523.462-17F5136.75
liver, embryo E17.CNhs10510.481-18A3201.92
liver, embryo E18.CNhs10579.499-43G4220.09
liver, neonate N00.CNhs11117.641-24F4231.53
liver, neonate N03.CNhs11123.1345-25G2193.57
liver, neonate N06.CNhs11101.684-20A8201.28
liver, neonate N07.CNhs11103.716-20H2564.91
liver, neonate N10.CNhs11115.751-24B9442.78
liver, neonate N20.CNhs11220.823-25A3430.39
liver, neonate N25.CNhs11198.1368-26H1343.55
liver, neonate N30.CNhs11106.1382-42D1426.48
lung, adult.CNhs10474.28-22B12128.91
lung, embryo E12.CNhs10522.354-16G2205.79
lung, embryo E14.CNhs10604.404-26F8677.12
lung, embryo E15.CNhs11020.432-17C5683.05
lung, embryo E16.CNhs10998.458-17B6823.53
lung, embryo E17.CNhs10605.480-44A61276.90
lung, embryo E18.CNhs10583.1287-20I61765.09
lung, neonate N00.CNhs11224.640-42C6994.60
lung, neonate N06.CNhs11212.683-20E52181.04
lung, neonate N07.CNhs11111.715-19A32272.67
lung, neonate N10.CNhs11219.750-23E62096.83
lung, neonate N20.CNhs11109.822-18A41715.49
lung, neonate N25.CNhs11119.1359-25C72212.09
lung, neonate N30.CNhs11133.1394-42H22622.49
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B6352.10
mammary gland, adult pregnant day19.CNhs10476.588-5H2361.75
medulla oblongata, adult.CNhs10477.17-12C295.53
medulla oblongata, neonate N30.CNhs11200.1396-42A371.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75406.25
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2940.45
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1129.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2159.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E357.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D742.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D833.87
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4230.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5184.71
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6172.35
olfactory brain, adult.CNhs10489.18-22I9130.46
ovary, adult.CNhs10507.91-2I7893.09
ovary, embryo E18.CNhs11040.505-44H71372.71
ovary, neonate N00.CNhs11217.1299-22I41251.62
oviduct, adult pregnant day01.CNhs10500.988-6G61034.53
pancreas, adult.CNhs10486.34-16E4180.53
pancreas, embryo E14.CNhs11012.405-44F4210.01
pancreas, embryo E15.CNhs11042.1556-45F2178.67
pancreas, embryo E16.CNhs11003.460-26E5232.93
pancreas, embryo E17.CNhs10599.1558-45G3556.94
pancreas, embryo E18.CNhs10580.1535-43I7522.64
pancreas, neonate N00.CNhs11105.645-26G9477.32
pancreas, neonate N01.CNhs11138.1531-43D7472.23
pancreas, neonate N02.CNhs11139.1539-43D8449.54
pancreas, neonate N16.CNhs11136.787-43B6277.16
pancreas, neonate N25.CNhs11094.1555-45E2270.93
pancreas, neonate N30.CNhs11182.1548-44H5265.06
pituitary gland, adult.CNhs10493.21-1G8140.26
pituitary gland, embryo E12.CNhs11018.346-16E6211.75
pituitary gland, embryo E13.CNhs11009.370-44C7334.13
pituitary gland, embryo E14.CNhs11037.398-44A5323.43
pituitary gland, embryo E15.CNhs10592.427-16B9401.14
pituitary gland, embryo E16.CNhs11036.449-43F6622.51
pituitary gland, embryo E17.CNhs11039.1265-44F5660.99
pituitary gland, neonate N00.CNhs11190.1308-22E9618.06
placenta, adult pregnant day10.CNhs10472.539-13I7204.40
placenta, adult pregnant day17.CNhs10464.577-18G3193.83
prostate, adult.CNhs10470.859-1F8250.96
skin, adult.CNhs10492.30-1C3457.06
skin, neonate N00.CNhs11124.650-25G41531.81
skin, neonate N03.CNhs11215.662-22H31460.06
skin, neonate N06.CNhs11097.693-20I51340.79
skin, neonate N10.CNhs11108.762-6C41087.76
small intestine, neonate N16.CNhs11114.790-21I1287.98
spinal cord, adult.CNhs10505.24-13C988.63
spleen, adult.CNhs10465.25-2G2479.46
spleen, embryo E16.CNhs11035.461-43C1405.14
spleen, embryo E18.CNhs11011.1271-21F21007.27
spleen, neonate N10.CNhs11116.752-24D1400.47
spleen, neonate N20.CNhs11112.824-19H1469.54
spleen, neonate N25.CNhs11099.1354-25G3436.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C618.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D316.45
stomach, adult.CNhs10503.33-1H6926.03
stomach, embryo E12.CNhs10588.356-43E371.18
stomach, embryo E15.CNhs10603.1252-16G8308.23
stomach, embryo E16.CNhs11022.459-17D4339.57
stomach, embryo E17.CNhs11006.1035-18D5551.78
stomach, embryo E18.CNhs10999.1286-20C6606.83
stomach, neonate N03.CNhs11193.1340-24B8910.60
stomach, neonate N07.CNhs11210.718-18A9880.42
stomach, neonate N25.CNhs11104.1355-25E4742.60
stomach, neonate N30.CNhs11134.1386-42I1431.88
submandibular gland, adult.CNhs10469.59-29C1528.14
testis, adult.CNhs10504.57-7G537.77
testis, embryo E13.CNhs11031.389-23F5489.07
testis, embryo E15.CNhs11034.443-27C5518.88
testis, embryo E16.CNhs11033.470-26G5928.12
testis, embryo E17.CNhs11029.486-18I51096.44
testis, embryo E18.CNhs11027.503-18G51404.03
testis, neonate N00.CNhs11189.1300-22B71587.96
testis, neonate N07.CNhs11222.726-26I4863.65
testis, neonate N10.CNhs11204.763-44D9504.90
testis, neonate N20.CNhs11110.839-18H3221.77
testis, neonate N30.CNhs11130.1391-42E2216.02
thymus, adult.CNhs10471.38-12B5111.24
thymus, embryo E14.CNhs11041.402-44I4262.53
thymus, embryo E15.CNhs11005.430-45I2270.95
thymus, embryo E16.CNhs11002.456-26C5106.28
thymus, embryo E17.CNhs10581.478-18C1171.87
thymus, embryo E18.CNhs10595.1273-19G4140.87
thymus, neonate N02.CNhs11181.1541-43F875.48
thymus, neonate N03.CNhs11137.2104-43C777.24
thymus, neonate N06.CNhs11197.681-26C497.63
thymus, neonate N07.CNhs11211.713-19D359.75
thymus, neonate N10.CNhs11194.748-24E454.04
thymus, neonate N20.CNhs11186.820-7A268.32
thymus, neonate N25.CNhs11125.1362-25G756.00
thymus, neonate N30.CNhs11132.1393-42G261.83
tongue, adult.CNhs10499.32-1B4707.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G533.24
urinary bladder, adult.CNhs10481.879-12E42381.64
uterus, adult pregnant day19.CNhs10497.590-15F52634.50
uterus, adult.CNhs10509.92-27E5512.82
vagina, adult.CNhs10502.89-27D5785.66
vesicular gland, adult.CNhs10491.51-27F8467.97
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.17
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A331.51
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A728.37
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A822.66
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.53
whole body, embryo E11.CNhs11014.324-5I836.33
whole body, embryo E12.CNhs10587.857-27C9229.44
whole body, embryo E13.CNhs10512.372-23H2260.20
whole body, embryo E14.5.CNhs10578.420-27D2734.67
whole body, embryo E14.CNhs10519.395-14B1254.05
whole body, embryo E16.CNhs10514.453-14F2465.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5762.53
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5753.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5831.18
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5744.45
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5796.69
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5745.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5597.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5651.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5620.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5636.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5530.63
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5560.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5670.05
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5625.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5749.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5655.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5567.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5721.06
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5678.91
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5645.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5663.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5828.67
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5608.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5999.39
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5603.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5536.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5691.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5553.43
whole body, embryo E17.5.CNhs10513.490-9F91013.53
whole body, embryo E17.CNhs10517.475-3I51399.44
whole body, embryo E18.CNhs10516.493-3B31293.41
whole body, neonate N00.CNhs10525.657-19C21512.91
whole body, neonate N01.CNhs10576.659-23C62493.44
whole body, neonate N06.CNhs10515.692-21D12932.32
whole body, neonate N10.CNhs10518.761-6B42208.08





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
splanchnic layer of lateral plate mesoderm1.22e-0733
cardiovascular system2.01e-0723
circulatory system2.01e-0723
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