FFCP PHASE1:Mm9::chr5:135462690..135462703,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=358 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:135462690..135462703,+ | |||
|description=CAGE_peak_at_chr5:135462690..135462703,+ | |description=CAGE_peak_at_chr5:135462690..135462703,+ | ||
|id=chr5:135462690..135462703,+ | |id=chr5:135462690..135462703,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.98e-19!25;CL:0000223!7.78e-18!20;CL:0002563!2.04e-12!9;CL:0002251!2.04e-12!9;CL:0002076!2.04e-12!15;CL:0000075!9.89e-10!7;CL:0000239!3.04e-09!6;CL:0000677!3.04e-09!6;CL:0000212!3.04e-09!6;CL:0000584!3.04e-09!6;CL:0000181!6.07e-07!5;CL:0000417!6.07e-07!5;CL:0000668!6.07e-07!5;CL:0000412!6.07e-07!5;CL:0000182!6.07e-07!5 | |ontology_enrichment_celltype=CL:0000066!8.98e-19!25;CL:0000223!7.78e-18!20;CL:0002563!2.04e-12!9;CL:0002251!2.04e-12!9;CL:0002076!2.04e-12!15;CL:0000075!9.89e-10!7;CL:0000239!3.04e-09!6;CL:0000677!3.04e-09!6;CL:0000212!3.04e-09!6;CL:0000584!3.04e-09!6;CL:0000181!6.07e-07!5;CL:0000417!6.07e-07!5;CL:0000668!6.07e-07!5;CL:0000412!6.07e-07!5;CL:0000182!6.07e-07!5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.57e-21,25;CL:0000239,8.33e-20,6;CL:0000677,8.33e-20,6;CL:0000584,8.33e-20,6;CL:0002076,1.36e-19,15;CL:0000223,3.99e-18,20;CL:0000075,5.77e-17,7;CL:0000068,2.67e-15,3;CL:0002202,2.67e-15,3;CL:0000069,2.67e-15,3;CL:0002632,2.67e-15,3;CL:0002368,2.67e-15,3;CL:0000307,2.67e-15,3;CL:0000377,2.67e-15,3;CL:0002563,3.59e-13,9;CL:0002251,3.59e-13,9;CL:0000682,4.48e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.74e-20!15;UBERON:0000160!1.20e-17!43;UBERON:0001242!1.44e-17!13;UBERON:0000060!1.44e-17!13;UBERON:0001262!1.44e-17!13;UBERON:0004786!1.44e-17!13;UBERON:0004119!5.31e-17!130;UBERON:0000925!5.31e-17!130;UBERON:0006595!5.31e-17!130;UBERON:0001007!1.32e-16!128;UBERON:0001555!1.32e-16!128;UBERON:0007026!1.32e-16!128;UBERON:0004921!6.73e-15!126;UBERON:0004185!6.73e-15!126;UBERON:0004923!5.02e-14!24;UBERON:0005409!2.20e-13!59;UBERON:0003350!2.04e-12!9;UBERON:0004808!2.04e-12!9;UBERON:0001277!2.04e-12!9;UBERON:0000485!1.71e-11!11;UBERON:0005178!4.28e-08!17;UBERON:0005181!4.28e-08!17;UBERON:0002224!4.28e-08!17;UBERON:0000915!4.28e-08!17;UBERON:0008947!4.28e-08!17;UBERON:0003258!4.28e-08!17;UBERON:0000466!1.21e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.81e-30,15;UBERON:0001242,1.50e-22,13;UBERON:0001262,1.50e-22,13;UBERON:0004786,1.50e-22,13;UBERON:0004923,1.60e-18,24;UBERON:0000160,1.33e-16,31;UBERON:0003126,2.67e-15,3;UBERON:0001005,2.67e-15,3;UBERON:0007196,2.67e-15,3;UBERON:0001558,2.67e-15,3;UBERON:0000331,5.72e-15,3;UBERON:0002116,5.72e-15,3;UBERON:0001204,5.72e-15,3;UBERON:0001168,5.72e-15,3;UBERON:0003350,3.59e-13,9;UBERON:0004808,3.59e-13,9;UBERON:0001277,3.59e-13,9;UBERON:0002108,2.31e-11,4;UBERON:0000485,9.48e-11,11;UBERON:0001962,1.16e-10,2;UBERON:0001961,1.16e-10,2;UBERON:0001744,1.16e-10,2;UBERON:0005409,2.19e-10,47;UBERON:0001007,2.81e-09,116;UBERON:0001555,2.81e-09,116;UBERON:0007026,2.81e-09,116;UBERON:0004119,4.48e-09,118;UBERON:0000925,4.48e-09,118;UBERON:0006595,4.48e-09,118;UBERON:0002465,2.19e-07,3;UBERON:0004921,5.88e-07,114 | |||
|phase1_expression=0,3.14077866875425,0.909998478779072,4.53696316960245,2.00358291978539,1.84667199103079,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,4.31979541542198,2.2940928106717,0,1.7230479846363,2.37018355954478,5.32065574477847,1.51218077855958,2.66076612786366,0,0,0,0.577703239502549,0.664938581433969,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0.679971333707751,1.61910957491345,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,0.14084341977668,0,0,0,3.89683873820185,2.02687892380079,4.54972000513305,0.22836775943812,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.05780226665418,0,0,0,0.201683524623343,0,0,1.42358718463353,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.554259570499814,0,0,0,0,0.167506257441816,0.476087281772027,0.390267295715598,0.472905432318573,0.221464689648775,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0.565815239267694,0.295301892880773,0.614870295887855,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,3.14077866875425,0.909998478779072,4.53696316960245,2.00358291978539,1.84667199103079,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,4.31979541542198,2.2940928106717,0,1.7230479846363,2.37018355954478,5.32065574477847,1.51218077855958,2.66076612786366,0,0,0,0.577703239502549,0.664938581433969,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0.679971333707751,1.61910957491345,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,0.14084341977668,0,0,0,3.89683873820185,2.02687892380079,4.54972000513305,0.22836775943812,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.05780226665418,0,0,0,0.201683524623343,0,0,1.42358718463353,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.554259570499814,0,0,0,0,0.167506257441816,0.476087281772027,0.390267295715598,0.472905432318573,0.221464689648775,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0.565815239267694,0.295301892880773,0.614870295887855,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr5:135462690..135462703,+ | |short_description=p@chr5:135462690..135462703,+ | ||
}} | }} |
Latest revision as of 10:01, 6 August 2015
Short description: | p@chr5:135462690..135462703, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:135462690..135462703, + |
Coexpression cluster: | MCL_coexpression_mm9:358 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.57e-21 | 25 |
brush border epithelial cell | 8.33e-20 | 6 |
gut absorptive cell | 8.33e-20 | 6 |
enterocyte | 8.33e-20 | 6 |
endo-epithelial cell | 1.36e-19 | 15 |
endodermal cell | 3.99e-18 | 20 |
columnar/cuboidal epithelial cell | 5.77e-17 | 7 |
duct epithelial cell | 2.67e-15 | 3 |
epithelial cell of tracheobronchial tree | 2.67e-15 | 3 |
branched duct epithelial cell | 2.67e-15 | 3 |
epithelial cell of lower respiratory tract | 2.67e-15 | 3 |
respiratory epithelial cell | 2.67e-15 | 3 |
tracheal epithelial cell | 2.67e-15 | 3 |
tracheoblast | 2.67e-15 | 3 |
intestinal epithelial cell | 3.59e-13 | 9 |
epithelial cell of alimentary canal | 3.59e-13 | 9 |
M cell of gut | 4.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.81e-30 | 15 |
intestinal mucosa | 1.50e-22 | 13 |
wall of intestine | 1.50e-22 | 13 |
gastrointestinal system mucosa | 1.50e-22 | 13 |
organ component layer | 1.60e-18 | 24 |
intestine | 1.33e-16 | 31 |
trachea | 2.67e-15 | 3 |
respiratory airway | 2.67e-15 | 3 |
tracheobronchial tree | 2.67e-15 | 3 |
lower respiratory tract | 2.67e-15 | 3 |
ileal mucosa | 5.72e-15 | 3 |
ileum | 5.72e-15 | 3 |
mucosa of small intestine | 5.72e-15 | 3 |
wall of small intestine | 5.72e-15 | 3 |
epithelium of mucosa | 3.59e-13 | 9 |
gastrointestinal system epithelium | 3.59e-13 | 9 |
intestinal epithelium | 3.59e-13 | 9 |
small intestine | 2.31e-11 | 4 |
simple columnar epithelium | 9.48e-11 | 11 |
gut-associated lymphoid tissue | 1.16e-10 | 2 |
mucosa-associated lymphoid tissue | 1.16e-10 | 2 |
lymphoid tissue | 1.16e-10 | 2 |
gastrointestinal system | 2.19e-10 | 47 |
digestive system | 2.81e-09 | 116 |
digestive tract | 2.81e-09 | 116 |
primitive gut | 2.81e-09 | 116 |
endoderm-derived structure | 4.48e-09 | 118 |
endoderm | 4.48e-09 | 118 |
presumptive endoderm | 4.48e-09 | 118 |
lymphoid system | 2.19e-07 | 3 |
subdivision of digestive tract | 5.88e-07 | 114 |