FFCP PHASE1:Mm9::chr16:37882681..37882733,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=462 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=53bp_to_ENSMUST00000119947_5end | |association_with_transcript=53bp_to_ENSMUST00000119947_5end | ||
|cluster_id=chr16:37882681..37882733,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000119947_5end | |description=CAGE_peak_1_at_ENSMUST00000119947_5end | ||
|id=chr16:37882681..37882733,+ | |id=chr16:37882681..37882733,+ | ||
|ontology_enrichment_celltype=CL:0002371!8.73e-14!118;CL:0000548!2.62e-13!115;CL:0000004!2.62e-13!115;CL:0000255!2.62e-13!115;CL:0000144!2.55e-12!121;CL:0000012!2.55e-12!121;CL:0000723!1.86e-10!91;CL:0000048!1.86e-10!91;CL:0000034!4.73e-10!97;CL:0000055!3.48e-09!50;CL:0002319!5.58e-08!43;CL:0002321!1.07e-07!70;CL:0000220!1.07e-07!70;CL:0000221!2.00e-07!44;CL:0000133!2.00e-07!44;CL:0000219!2.57e-07!54;CL:0000393!7.00e-07!39;CL:0000211!7.00e-07!39 | |ontology_enrichment_celltype=CL:0002371!8.73e-14!118;CL:0000548!2.62e-13!115;CL:0000004!2.62e-13!115;CL:0000255!2.62e-13!115;CL:0000144!2.55e-12!121;CL:0000012!2.55e-12!121;CL:0000723!1.86e-10!91;CL:0000048!1.86e-10!91;CL:0000034!4.73e-10!97;CL:0000055!3.48e-09!50;CL:0002319!5.58e-08!43;CL:0002321!1.07e-07!70;CL:0000220!1.07e-07!70;CL:0000221!2.00e-07!44;CL:0000133!2.00e-07!44;CL:0000219!2.57e-07!54;CL:0000393!7.00e-07!39;CL:0000211!7.00e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.13e-11,91;CL:0000048,1.13e-11,91;CL:0000034,2.33e-11,97;CL:0002321,3.03e-09,70;CL:0002319,1.46e-08,43;CL:0000219,3.78e-08,54;CL:0000221,5.55e-08,44;CL:0000133,5.55e-08,44;CL:0000393,3.44e-07,39;CL:0000211,3.44e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.320297694209588,2.09385244583617,1.36499771816861,3.93203474698879,3.50627010962443,0.503637815735669,2.33612640595526,4.00282302668886,2.67498572088167,4.68129052643987,2.56826952338257,2.15384829287408,3.42401459862411,3.75907730401689,0.666219523631325,2.02475267389826,2.79824751251259,4.41647031501533,5.21034847701807,0.84877930359606,1.02051948181284,0.695036658406197,3.13439746966722,7.03966660290989,4.12936705920906,0,0.86152399231815,1.939241094173,7.9809836171677,3.52842181663903,0.665191531965914,5.08024538767705,1.84519436275371,0,0.288851619751275,0.498703936075477,0,2.92972141515835,3.1253413780952,1.0470474879476,1.76469446409304,2.73218193983378,2.42755176515577,3.02152363141385,3.14268486780495,1.83546752161682,5.47673941043627,10.9012578190223,3.51497892375155,8.74934545834275,4.75953833526233,0,3.02008690903925,7.97898356212479,5.04140698713696,11.3194151855817,5.15760191889762,3.09403255366465,0.404632921719196,3.1739458756322,1.90149421051854,6.09920157724438,4.4464739805557,16.1981949110652,14.8329954385046,22.0248835633291,12.2836045312546,16.1371688235053,4.14758449233911,6.61529097825284,2.94454945891935,5.42736870367227,4.63823935998388,1.34739879136449,3.06705507258356,1.83843757322004,1.10115880999389,1.40456071893706,2.15049146558741,0.923204014111357,5.12330804173494,3.12548022334056,2.79182999001381,1.68828783009504,1.37518422999129,4.71405736757868,4.27115042397309,1.67759501242771,3.10477392666055,2.72057616384428,2.31891590961342,0,11.5595126730318,1.07940638327563,0,0.448026887097336,0.983110940922263,2.72688516124892,7.27400812888033,4.94675404314476,0.563373679106722,3.84979432242953,0,0,9.09262372247099,6.84071636782766,9.0994400102661,2.62622923353838,0.517875767294343,1.03909497345377,1.90833859442749,3.04465478312141,1.84492397804847,2.11011696773672,3.88042733547826,0.628332956648377,4.20231445148436,2.16899035379867,3.5384422077995,1.13236794963186,0.662524555381181,1.45462575940567,0,0,5.44561437714983,3.0654846625031,0.958520996047362,0.599902730993408,0.508280908292259,0.449371918214468,0.915001205637253,1.25654352112864,0.347648640384553,0.767146371990992,1.24672826735736,0.162241263067758,1.12023300235348,1.49288364732112,1.26361379216837,1.26265113531884,2.21204753036596,0.459804208866946,1.0803727788321,0.90422890701429,1.2246569847239,1.2811372028485,0.749613796477831,0.776110112217047,0.862271971731369,0.756424320671277,2.28736461413134,0.657587197282725,2.22437799380478,3.1342694986995,1.23469281844766,0.995171334092466,0,0.772043721344145,1.42081749697796,0.414251545071004,0.469052119962192,0.540186184383045,0.473489471170421,0.590292695242212,0.154267112887378,0.697601834251224,0.536546802799238,1.05088808130453,0.329119699826961,0.820837320395476,0.486412857275134,1.02339991197733,0.658650345873152,1.07365135008297,0.210289948564127,2.36680608472354,2.31293148088659,2.64450566663544,1.06644125267617,0.232236671860439,1.03093969057675,1.4117846723634,2.00140239460383,0.951128130562796,7.59246498471219,1.81168850196412,3.2673577144035,1.59165177632921,1.55971269695296,3.59527763461689,1.51296634912286,2.38969527905241,2.46568271239006,1.02823661348756,1.1270773567308,0.814605311381257,1.16371492300575,2.17421041659988,0.69560190836683,1.47610147979602,1.09899109488962,1.1105744752962,1.48226313543574,0.83422552858047,0.786235980452812,0.449724224769707,1.21716072833102,0.72353147925725,1.2731292589071,1.43848068725405,5.0261920300261,0.823684239564244,4.31304619582064,0.744281895337007,0.936113019343682,0.252578877947112,0.358794827043824,1.4473305640901,2.21703828199926,0.757965647081939,1.62964976442026,1.01847051465113,1.17345124144251,1.17254380209271,0.952174563544055,2.53673742215138,1.26108115284953,1.32878813789265,1.59454768657487,2.13022309130459,1.89953480052485,1.73578870297814,21.1107797514981,19.5806046174735,0.491764273019036,0.275936746304732,0.321101179975584,0.703270119553219,1.47541450839008,1.00988370881749,1.57754109708128,2.73307121007647,3.66219776145758,1.43381278771531,1.55959071857676,1.69845918473299,2.42886421004937,3.21481443702443,2.37172666767914,0.963963949265421,0.425820255624806,2.84904965867608,0.977321756121456,1.64970122972535,1.32745138339963,1.21390318077491,0.906970670894253,1.32023555829129,0.885905678642318,0.614870295887855,1.03371317267288,2.54473610634254,2.13898427030833,0.632073515871632,0,2.06271086496374,1.36175842301515,0.540183282093931,1.55230420539305,1.50035924522115,1.06404140185364,2.14042581122485,0.987294123612726,1.522324745573,1.87737366450968,1.0591603543191,0.220528398054962,0.32977250588296,3.06782410722221,1.5078231232039,0.954978752025092,0.820704498725306,3.78925087618806,0.370850604021019,2.22132145037209,1.23832120777933,1.48155621895769,1.13021074202815,2.05041341581538,1.83022538565218,0.339956859987711,0.839708713941948,0.138199973804424,0.954670618015114,1.89801596148681,1.21991680276109,1.40406943068342,0.627264888043406,1.31017538247707,1.21377911746339,1.57041565878138,1.30877970992015,1.42576470620972,0.621339313086926,1.12738587736838,1.79419855252775,2.15096037594227,0.972255941720238,1.03327858782185,1.01373675294467,2.46450201156083,1.3020438484395,1.15345278868282,1.69108884578204,1.15212002503146,0.948033361884535,0.608175645870493,1.95150818613172,1.94881234466693,1.25318686967237,1.39076948346885,1.20195449519969,1.77227432609493,0.706765149637033,1.143102099825,2.11734988787365,1.07203668813728,1.53938946624527,1.98690733708667,0.453460767230423,2.44184548711471,5.56225910978749,3.35769232728157,1.54551675225752,1.12609485270709,0.73260649706906,0.857473516316263,1.00314420807073,1.12950368523413,2.76195141904306,1.71868654031819,4.1244763762485,0.685082519770642,1.5107877947794,0.675022500231806,0,2.26571204492102,1.03552062350364,1.55681021376265,0.399024873401031,0.853668028770671,1.70174701947806,0.628839487883947,1.2869045591501,1.11123363900808,0.824140228955577,0.64183841918363,0,0.760437899670719,0.565879024158229,0.749132059759059,0.512201219238954,1.03383844120104,0.476293691283074,0,0.964546102318525,0,0.735994600671987,0.342869252385415,0.887379030796687,0.238436189947321,0.581385666529314,0.470546902076653,0.423073039458382,1.09756783723664,0.789209134313529,1.08643291076689,0.561142271657738,0.355905054372522,1.67457620038458,0.818462086339379,1.08455788830176,0.964533054905707,0.749431733813838,0.467863216890817,0.214871054048298,2.29545998482612,1.54413993383661,0.463735671240843 | |phase1_expression=0.320297694209588,2.09385244583617,1.36499771816861,3.93203474698879,3.50627010962443,0.503637815735669,2.33612640595526,4.00282302668886,2.67498572088167,4.68129052643987,2.56826952338257,2.15384829287408,3.42401459862411,3.75907730401689,0.666219523631325,2.02475267389826,2.79824751251259,4.41647031501533,5.21034847701807,0.84877930359606,1.02051948181284,0.695036658406197,3.13439746966722,7.03966660290989,4.12936705920906,0,0.86152399231815,1.939241094173,7.9809836171677,3.52842181663903,0.665191531965914,5.08024538767705,1.84519436275371,0,0.288851619751275,0.498703936075477,0,2.92972141515835,3.1253413780952,1.0470474879476,1.76469446409304,2.73218193983378,2.42755176515577,3.02152363141385,3.14268486780495,1.83546752161682,5.47673941043627,10.9012578190223,3.51497892375155,8.74934545834275,4.75953833526233,0,3.02008690903925,7.97898356212479,5.04140698713696,11.3194151855817,5.15760191889762,3.09403255366465,0.404632921719196,3.1739458756322,1.90149421051854,6.09920157724438,4.4464739805557,16.1981949110652,14.8329954385046,22.0248835633291,12.2836045312546,16.1371688235053,4.14758449233911,6.61529097825284,2.94454945891935,5.42736870367227,4.63823935998388,1.34739879136449,3.06705507258356,1.83843757322004,1.10115880999389,1.40456071893706,2.15049146558741,0.923204014111357,5.12330804173494,3.12548022334056,2.79182999001381,1.68828783009504,1.37518422999129,4.71405736757868,4.27115042397309,1.67759501242771,3.10477392666055,2.72057616384428,2.31891590961342,0,11.5595126730318,1.07940638327563,0,0.448026887097336,0.983110940922263,2.72688516124892,7.27400812888033,4.94675404314476,0.563373679106722,3.84979432242953,0,0,9.09262372247099,6.84071636782766,9.0994400102661,2.62622923353838,0.517875767294343,1.03909497345377,1.90833859442749,3.04465478312141,1.84492397804847,2.11011696773672,3.88042733547826,0.628332956648377,4.20231445148436,2.16899035379867,3.5384422077995,1.13236794963186,0.662524555381181,1.45462575940567,0,0,5.44561437714983,3.0654846625031,0.958520996047362,0.599902730993408,0.508280908292259,0.449371918214468,0.915001205637253,1.25654352112864,0.347648640384553,0.767146371990992,1.24672826735736,0.162241263067758,1.12023300235348,1.49288364732112,1.26361379216837,1.26265113531884,2.21204753036596,0.459804208866946,1.0803727788321,0.90422890701429,1.2246569847239,1.2811372028485,0.749613796477831,0.776110112217047,0.862271971731369,0.756424320671277,2.28736461413134,0.657587197282725,2.22437799380478,3.1342694986995,1.23469281844766,0.995171334092466,0,0.772043721344145,1.42081749697796,0.414251545071004,0.469052119962192,0.540186184383045,0.473489471170421,0.590292695242212,0.154267112887378,0.697601834251224,0.536546802799238,1.05088808130453,0.329119699826961,0.820837320395476,0.486412857275134,1.02339991197733,0.658650345873152,1.07365135008297,0.210289948564127,2.36680608472354,2.31293148088659,2.64450566663544,1.06644125267617,0.232236671860439,1.03093969057675,1.4117846723634,2.00140239460383,0.951128130562796,7.59246498471219,1.81168850196412,3.2673577144035,1.59165177632921,1.55971269695296,3.59527763461689,1.51296634912286,2.38969527905241,2.46568271239006,1.02823661348756,1.1270773567308,0.814605311381257,1.16371492300575,2.17421041659988,0.69560190836683,1.47610147979602,1.09899109488962,1.1105744752962,1.48226313543574,0.83422552858047,0.786235980452812,0.449724224769707,1.21716072833102,0.72353147925725,1.2731292589071,1.43848068725405,5.0261920300261,0.823684239564244,4.31304619582064,0.744281895337007,0.936113019343682,0.252578877947112,0.358794827043824,1.4473305640901,2.21703828199926,0.757965647081939,1.62964976442026,1.01847051465113,1.17345124144251,1.17254380209271,0.952174563544055,2.53673742215138,1.26108115284953,1.32878813789265,1.59454768657487,2.13022309130459,1.89953480052485,1.73578870297814,21.1107797514981,19.5806046174735,0.491764273019036,0.275936746304732,0.321101179975584,0.703270119553219,1.47541450839008,1.00988370881749,1.57754109708128,2.73307121007647,3.66219776145758,1.43381278771531,1.55959071857676,1.69845918473299,2.42886421004937,3.21481443702443,2.37172666767914,0.963963949265421,0.425820255624806,2.84904965867608,0.977321756121456,1.64970122972535,1.32745138339963,1.21390318077491,0.906970670894253,1.32023555829129,0.885905678642318,0.614870295887855,1.03371317267288,2.54473610634254,2.13898427030833,0.632073515871632,0,2.06271086496374,1.36175842301515,0.540183282093931,1.55230420539305,1.50035924522115,1.06404140185364,2.14042581122485,0.987294123612726,1.522324745573,1.87737366450968,1.0591603543191,0.220528398054962,0.32977250588296,3.06782410722221,1.5078231232039,0.954978752025092,0.820704498725306,3.78925087618806,0.370850604021019,2.22132145037209,1.23832120777933,1.48155621895769,1.13021074202815,2.05041341581538,1.83022538565218,0.339956859987711,0.839708713941948,0.138199973804424,0.954670618015114,1.89801596148681,1.21991680276109,1.40406943068342,0.627264888043406,1.31017538247707,1.21377911746339,1.57041565878138,1.30877970992015,1.42576470620972,0.621339313086926,1.12738587736838,1.79419855252775,2.15096037594227,0.972255941720238,1.03327858782185,1.01373675294467,2.46450201156083,1.3020438484395,1.15345278868282,1.69108884578204,1.15212002503146,0.948033361884535,0.608175645870493,1.95150818613172,1.94881234466693,1.25318686967237,1.39076948346885,1.20195449519969,1.77227432609493,0.706765149637033,1.143102099825,2.11734988787365,1.07203668813728,1.53938946624527,1.98690733708667,0.453460767230423,2.44184548711471,5.56225910978749,3.35769232728157,1.54551675225752,1.12609485270709,0.73260649706906,0.857473516316263,1.00314420807073,1.12950368523413,2.76195141904306,1.71868654031819,4.1244763762485,0.685082519770642,1.5107877947794,0.675022500231806,0,2.26571204492102,1.03552062350364,1.55681021376265,0.399024873401031,0.853668028770671,1.70174701947806,0.628839487883947,1.2869045591501,1.11123363900808,0.824140228955577,0.64183841918363,0,0.760437899670719,0.565879024158229,0.749132059759059,0.512201219238954,1.03383844120104,0.476293691283074,0,0.964546102318525,0,0.735994600671987,0.342869252385415,0.887379030796687,0.238436189947321,0.581385666529314,0.470546902076653,0.423073039458382,1.09756783723664,0.789209134313529,1.08643291076689,0.561142271657738,0.355905054372522,1.67457620038458,0.818462086339379,1.08455788830176,0.964533054905707,0.749431733813838,0.467863216890817,0.214871054048298,2.29545998482612,1.54413993383661,0.463735671240843 | ||
|short_description=p1@ENSMUST00000119947 | |short_description=p1@ENSMUST00000119947 | ||
}} | }} |
Latest revision as of 10:13, 6 August 2015
Short description: | p1@ENSMUST00000119947 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000119947_5end |
Coexpression cluster: | MCL_coexpression_mm9:462 |
Association with transcript: | 53bp_to_ENSMUST00000119947_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.13e-11 | 91 |
multi fate stem cell | 1.13e-11 | 91 |
stem cell | 2.33e-11 | 97 |
embryonic cell | 3.03e-09 | 70 |
neural cell | 1.46e-08 | 43 |
motile cell | 3.78e-08 | 54 |
ectodermal cell | 5.55e-08 | 44 |
neurectodermal cell | 5.55e-08 | 44 |
electrically responsive cell | 3.44e-07 | 39 |
electrically active cell | 3.44e-07 | 39 |