FFCP PHASE1:Mm9::chr8:42101154..42101185,-: Difference between revisions
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{{FFCP|EntrezGene=102103|HGNC=|MCL_coexpression_id=74|UniProt=Q8K0Q3|association_with_transcript=-305bp_to_uc009lnj.1_5end|description=CAGE_peak_13_at_Mtus1_5end|id=chr8:42101154..42101185,-|ontology_enrichment_celltype=CL:0002563!2.43e-08!9;CL:0002251!2.43e-08!9;CL:0000239!9.86e-07!6;CL:0000677!9.86e-07!6;CL:0000212!9.86e-07!6;CL:0000584!9.86e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,4.28e-15,9;CL:0002251,4.28e-15,9;CL:0000239,4.73e-14,6;CL:0000677,4.73e-14,6;CL:0000584,4.73e-14,6;CL:0000075,6.33e-12,7;CL:0000066,5.80e-09,25;CL:0002076,1.79e-08,15;CL:0000682,6.91e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.74e-26!43;UBERON:0005409!8.21e-24!59;UBERON:0000344!2.22e-13!15;UBERON:0001242!1.03e-11!13;UBERON:0000060!1.03e-11!13;UBERON:0001262!1.03e-11!13;UBERON:0004786!1.03e-11!13;UBERON:0001007!1.83e-11!128;UBERON:0001555!1.83e-11!128;UBERON:0007026!1.83e-11!128;UBERON:0004119!5.91e-11!130;UBERON:0000925!5.91e-11!130;UBERON:0006595!5.91e-11!130;UBERON:0004921!2.21e-10!126;UBERON:0004185!2.21e-10!126;UBERON:0003350!2.43e-08!9;UBERON:0004808!2.43e-08!9;UBERON:0001277!2.43e-08!9;UBERON:0004923!2.77e-08!24;UBERON:0002108!1.14e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.78e-34,31;UBERON:0000344,3.79e-27,15;UBERON:0005409,2.30e-24,47;UBERON:0001242,3.83e-23,13;UBERON:0001262,3.83e-23,13;UBERON:0004786,3.83e-23,13;UBERON:0004923,4.04e-18,24;UBERON:0003350,4.28e-15,9;UBERON:0004808,4.28e-15,9;UBERON:0001277,4.28e-15,9;UBERON:0000485,4.40e-12,11;UBERON:0001007,1.06e-09,116;UBERON:0001555,1.06e-09,116;UBERON:0007026,1.06e-09,116;UBERON:0002108,1.61e-09,4;UBERON:0004119,2.02e-09,118;UBERON:0000925,2.02e-09,118;UBERON:0006595,2.02e-09,118;UBERON:0004921,4.04e-08,114;UBERON:0000331,2.60e-07,3;UBERON:0002116,2.60e-07,3;UBERON:0001204,2.60e-07,3;UBERON:0001168,2.60e-07,3|phase1_expression=0,4.53668029931169,3.63999391511629,7.25914107136392,8.01433167914156,2.85394762250213,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19984845586813,2.52350209173887,4.59385571292016,5.1691439539089,3.01659725760245,1.71021077510736,2.77233142735924,4.43461021310609,0,0,0,1.1554064790051,0.332469290716985,1.22501613757421,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0.150722640552623,0,0,2.47194967734374,0,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0.41557608911912,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0,0,0,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0.983821158737019,0.617068451549513,1.16266972375204,0,0.116765342367169,0,0.820837320395476,0.243206428637567,0,0,0,0,0,29.7376904685418,3.17340679996253,0.213288250535234,0,1.28867461322093,1.61346819698674,0.889512175379481,0.760902504450237,4.74529061544512,1.31759163779209,0.251335208800269,0.994782360205754,0.58489226135736,4.49409704327111,3.02593269824572,6.37252074413975,0,0,0,0,0.193952487167626,0.0701358198903186,0,0.295220295959204,0,0,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0,0.189491411770485,0,0.339490171550376,0.469380496577004,0.335012514883631,0,0,0.157635144106191,0.8858587585951,0,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,2.26326095707078,1.47650946440386,1.22974059177571,0.775284879504663,0.363533729477506,2.49548164869305,0.632073515871632,1.05418608574999,2.06271086496374,0,0,0,0.214337035031592,0,0,0,0,0,0,3.08739757276947,0,0,0.0603129249281559,0.119372344003136,0,5.53813589596716,0.18542530201051,0,0,0,0.376736914009382,0,0,0,0,0,0,0,0,0.216010681643603,1.04544148007234,0.87345025498471,1.07891477107857,0.661227645802687,0.523511883968059,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0.234714477291508,0.2604087696879,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0.256100609619477,0.0574354689556133,0,0,0.192909220463705,0,0,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.282328141245992,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p13@Mtus1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:102103 | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8K0Q3 | |||
|association_with_transcript=-305bp_to_uc009lnj.1_5end | |||
|cluster_id=chr8:42101154..42101185,- | |||
|description=CAGE_peak_13_at_Mtus1_5end | |||
|id=chr8:42101154..42101185,- | |||
|ontology_enrichment_celltype=CL:0002563!2.43e-08!9;CL:0002251!2.43e-08!9;CL:0000239!9.86e-07!6;CL:0000677!9.86e-07!6;CL:0000212!9.86e-07!6;CL:0000584!9.86e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.28e-15,9;CL:0002251,4.28e-15,9;CL:0000239,4.73e-14,6;CL:0000677,4.73e-14,6;CL:0000584,4.73e-14,6;CL:0000075,6.33e-12,7;CL:0000066,5.80e-09,25;CL:0002076,1.79e-08,15;CL:0000682,6.91e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.74e-26!43;UBERON:0005409!8.21e-24!59;UBERON:0000344!2.22e-13!15;UBERON:0001242!1.03e-11!13;UBERON:0000060!1.03e-11!13;UBERON:0001262!1.03e-11!13;UBERON:0004786!1.03e-11!13;UBERON:0001007!1.83e-11!128;UBERON:0001555!1.83e-11!128;UBERON:0007026!1.83e-11!128;UBERON:0004119!5.91e-11!130;UBERON:0000925!5.91e-11!130;UBERON:0006595!5.91e-11!130;UBERON:0004921!2.21e-10!126;UBERON:0004185!2.21e-10!126;UBERON:0003350!2.43e-08!9;UBERON:0004808!2.43e-08!9;UBERON:0001277!2.43e-08!9;UBERON:0004923!2.77e-08!24;UBERON:0002108!1.14e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.78e-34,31;UBERON:0000344,3.79e-27,15;UBERON:0005409,2.30e-24,47;UBERON:0001242,3.83e-23,13;UBERON:0001262,3.83e-23,13;UBERON:0004786,3.83e-23,13;UBERON:0004923,4.04e-18,24;UBERON:0003350,4.28e-15,9;UBERON:0004808,4.28e-15,9;UBERON:0001277,4.28e-15,9;UBERON:0000485,4.40e-12,11;UBERON:0001007,1.06e-09,116;UBERON:0001555,1.06e-09,116;UBERON:0007026,1.06e-09,116;UBERON:0002108,1.61e-09,4;UBERON:0004119,2.02e-09,118;UBERON:0000925,2.02e-09,118;UBERON:0006595,2.02e-09,118;UBERON:0004921,4.04e-08,114;UBERON:0000331,2.60e-07,3;UBERON:0002116,2.60e-07,3;UBERON:0001204,2.60e-07,3;UBERON:0001168,2.60e-07,3 | |||
|phase1_expression=0,4.53668029931169,3.63999391511629,7.25914107136392,8.01433167914156,2.85394762250213,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19984845586813,2.52350209173887,4.59385571292016,5.1691439539089,3.01659725760245,1.71021077510736,2.77233142735924,4.43461021310609,0,0,0,1.1554064790051,0.332469290716985,1.22501613757421,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0.150722640552623,0,0,2.47194967734374,0,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0.41557608911912,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0,0,0,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0.983821158737019,0.617068451549513,1.16266972375204,0,0.116765342367169,0,0.820837320395476,0.243206428637567,0,0,0,0,0,29.7376904685418,3.17340679996253,0.213288250535234,0,1.28867461322093,1.61346819698674,0.889512175379481,0.760902504450237,4.74529061544512,1.31759163779209,0.251335208800269,0.994782360205754,0.58489226135736,4.49409704327111,3.02593269824572,6.37252074413975,0,0,0,0,0.193952487167626,0.0701358198903186,0,0.295220295959204,0,0,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0,0.189491411770485,0,0.339490171550376,0.469380496577004,0.335012514883631,0,0,0.157635144106191,0.8858587585951,0,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,2.26326095707078,1.47650946440386,1.22974059177571,0.775284879504663,0.363533729477506,2.49548164869305,0.632073515871632,1.05418608574999,2.06271086496374,0,0,0,0.214337035031592,0,0,0,0,0,0,3.08739757276947,0,0,0.0603129249281559,0.119372344003136,0,5.53813589596716,0.18542530201051,0,0,0,0.376736914009382,0,0,0,0,0,0,0,0,0.216010681643603,1.04544148007234,0.87345025498471,1.07891477107857,0.661227645802687,0.523511883968059,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0.234714477291508,0.2604087696879,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0.256100609619477,0.0574354689556133,0,0,0.192909220463705,0,0,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.282328141245992,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p13@Mtus1 | |||
}} |
Revision as of 10:28, 6 August 2015
Short description: | p13@Mtus1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Mtus1_5end |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | -305bp_to_uc009lnj.1_5end |
EntrezGene: | 102103 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.28e-15 | 9 |
epithelial cell of alimentary canal | 4.28e-15 | 9 |
brush border epithelial cell | 4.73e-14 | 6 |
gut absorptive cell | 4.73e-14 | 6 |
enterocyte | 4.73e-14 | 6 |
columnar/cuboidal epithelial cell | 6.33e-12 | 7 |
epithelial cell | 5.80e-09 | 25 |
endo-epithelial cell | 1.79e-08 | 15 |
M cell of gut | 6.91e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.78e-34 | 31 |
mucosa | 3.79e-27 | 15 |
gastrointestinal system | 2.30e-24 | 47 |
intestinal mucosa | 3.83e-23 | 13 |
wall of intestine | 3.83e-23 | 13 |
gastrointestinal system mucosa | 3.83e-23 | 13 |
organ component layer | 4.04e-18 | 24 |
epithelium of mucosa | 4.28e-15 | 9 |
gastrointestinal system epithelium | 4.28e-15 | 9 |
intestinal epithelium | 4.28e-15 | 9 |
simple columnar epithelium | 4.40e-12 | 11 |
digestive system | 1.06e-09 | 116 |
digestive tract | 1.06e-09 | 116 |
primitive gut | 1.06e-09 | 116 |
small intestine | 1.61e-09 | 4 |
endoderm-derived structure | 2.02e-09 | 118 |
endoderm | 2.02e-09 | 118 |
presumptive endoderm | 2.02e-09 | 118 |
subdivision of digestive tract | 4.04e-08 | 114 |
ileal mucosa | 2.60e-07 | 3 |
ileum | 2.60e-07 | 3 |
mucosa of small intestine | 2.60e-07 | 3 |
wall of small intestine | 2.60e-07 | 3 |