FFCP PHASE1:Hg19::chr10:101292731..101292741,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=159296 | |EntrezGene=159296 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7836 | |HGNC=7836 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAU0 | |UniProt=Q8TAU0 | ||
|association_with_transcript=41bp_to_ENST00000344586,NM_145285,uc009xwj.2_5end | |association_with_transcript=41bp_to_ENST00000344586,NM_145285,uc009xwj.2_5end | ||
|cluster_id=chr10:101292731..101292741,+ | |||
|description=CAGE_peak_2_at_NKX2-3_5end | |description=CAGE_peak_2_at_NKX2-3_5end | ||
|id=chr10:101292731..101292741,+ | |id=chr10:101292731..101292741,+ | ||
|ontology_enrichment_celltype=CL:0002504!6.84e-17!3;CL:1000279!6.84e-17!3;CL:1000280!6.84e-17!3 | |ontology_enrichment_celltype=CL:0002504!6.84e-17!3;CL:1000279!6.84e-17!3;CL:1000280!6.84e-17!3 | ||
|ontology_enrichment_celltype_v019=CL:0002504;4.46e-17;3!CL:1000279;4.46e-17;3!CL:1000280;4.46e-17;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,4.46e-17,3;CL:1000279,4.46e-17,3;CL:1000280,4.46e-17,3 | |||
|ontology_enrichment_development_v019=UBERON:0001045;7.09e-14;1!UBERON:0006242;1.25e-13;1!UBERON:0004872;3.64e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!8.15e-36!35;UBERON:0000059!7.03e-31!11;UBERON:0000160!1.13e-30!27;UBERON:0001155!4.90e-29!9;UBERON:0004921!6.48e-17!129;UBERON:0004185!6.48e-17!129;UBERON:0001007!3.46e-16!155;UBERON:0001555!3.46e-16!155;UBERON:0007026!3.46e-16!155;UBERON:0004119!2.09e-14!169;UBERON:0000925!2.09e-14!169;UBERON:0006595!2.09e-14!169;UBERON:0002106!1.54e-08!3;UBERON:0004854!1.54e-08!3;UBERON:0009034!1.54e-08!3;UBERON:0002095!1.54e-08!3;UBERON:0004782!1.54e-08!3;UBERON:0003281!1.54e-08!3;UBERON:0009664!1.54e-08!3;UBERON:0002296!1.54e-08!3;UBERON:0005602!1.54e-08!3;UBERON:0001179!1.54e-08!3;UBERON:0006293!1.54e-08!3;UBERON:0002075!2.40e-07!18;UBERON:0001154!6.43e-07!1;UBERON:0001153!6.43e-07!1;UBERON:0000945!8.89e-07!8;UBERON:0010039!8.89e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.39e-81;17!UBERON:0005409;1.26e-63;22!UBERON:0000059;4.83e-54;11!UBERON:0001155;1.56e-48;9!UBERON:0004921;2.06e-40;33!UBERON:0002108;3.89e-23;4!UBERON:0002106;8.05e-18;3!UBERON:0001555;1.32e-14;54!UBERON:0001154;7.09e-14;1!UBERON:0001153;7.09e-14;1!UBERON:0009854;7.09e-14;1!UBERON:0001007;1.65e-13;81!UBERON:0004177;4.44e-11;5!UBERON:0005057;4.44e-11;5!UBERON:0004907;4.79e-11;5!UBERON:0001135;6.29e-08;15!UBERON:0002075;7.92e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.39e-81,17;UBERON:0005409,7.24e-79,25;UBERON:0000059,5.44e-54,11;UBERON:0001155,1.84e-48,9;UBERON:0002108,3.47e-23,4;UBERON:0002106,7.09e-18,3;UBERON:0004854,7.09e-18,3;UBERON:0009034,7.09e-18,3;UBERON:0002095,7.09e-18,3;UBERON:0004782,7.09e-18,3;UBERON:0003281,7.09e-18,3;UBERON:0009664,7.09e-18,3;UBERON:0002296,7.09e-18,3;UBERON:0005602,7.09e-18,3;UBERON:0001179,7.09e-18,3;UBERON:0006293,7.09e-18,3;UBERON:0004921,4.25e-16,118;UBERON:0001007,4.97e-15,145;UBERON:0001555,4.97e-15,145;UBERON:0007026,4.97e-15,145;UBERON:0001154,8.58e-14,1;UBERON:0001153,8.58e-14,1;UBERON:0001045,8.58e-14,1;UBERON:0004119,1.81e-13,160;UBERON:0000925,1.81e-13,160;UBERON:0006595,1.81e-13,160;UBERON:0004907,5.03e-11,5;UBERON:0011216,4.97e-09,223;UBERON:0004177,3.45e-08,7;UBERON:0005057,3.45e-08,7;UBERON:0001135,6.22e-08,15;UBERON:0000945,2.86e-07,8;UBERON:0010039,2.86e-07,8;UBERON:0002075,7.68e-07,18 | |||
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|short_description=p2@NKX2-3 | |short_description=p2@NKX2-3 | ||
}} | }} |
Latest revision as of 18:47, 15 September 2015
Short description: | p2@NKX2-3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NKX2-3_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000344586, NM_145285, uc009xwj.2_5end |
EntrezGene: | NKX2-3 |
HGNC: | 7836 |
UniProt: | Q8TAU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 4.46e-17 | 3 |
smooth muscle cell of large intestine | 4.46e-17 | 3 |
smooth muscle cell of colon | 4.46e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.39e-81 | 17 |
gastrointestinal system | 7.24e-79 | 25 |
large intestine | 5.44e-54 | 11 |
colon | 1.84e-48 | 9 |
small intestine | 3.47e-23 | 4 |
spleen | 7.09e-18 | 3 |
gastrointestinal system mesentery | 7.09e-18 | 3 |
stomach region | 7.09e-18 | 3 |
mesentery | 7.09e-18 | 3 |
gastrointestinal system serosa | 7.09e-18 | 3 |
mesentery of stomach | 7.09e-18 | 3 |
gut mesentery | 7.09e-18 | 3 |
dorsal mesentery | 7.09e-18 | 3 |
dorsal mesogastrium | 7.09e-18 | 3 |
peritoneal cavity | 7.09e-18 | 3 |
spleen primordium | 7.09e-18 | 3 |
subdivision of digestive tract | 4.25e-16 | 118 |
digestive system | 4.97e-15 | 145 |
digestive tract | 4.97e-15 | 145 |
primitive gut | 4.97e-15 | 145 |
vermiform appendix | 8.58e-14 | 1 |
caecum | 8.58e-14 | 1 |
midgut | 8.58e-14 | 1 |
endoderm-derived structure | 1.81e-13 | 160 |
endoderm | 1.81e-13 | 160 |
presumptive endoderm | 1.81e-13 | 160 |
lower digestive tract | 5.03e-11 | 5 |
organ system subdivision | 4.97e-09 | 223 |
hemopoietic organ | 3.45e-08 | 7 |
immune organ | 3.45e-08 | 7 |
smooth muscle tissue | 6.22e-08 | 15 |
stomach | 2.86e-07 | 8 |
food storage organ | 2.86e-07 | 8 |
viscus | 7.68e-07 | 18 |