FFCP PHASE1:Hg19::chr2:232329165..232329169,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:232329165..232329169,-
|short_description=p4@NCL
|description=CAGE_peak_4_at_NCL_5end
|association_with_transcript=25bp_to_ENST00000392033_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4691 | |EntrezGene=4691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7667 | |HGNC=7667 | ||
|TSSclassifier=strong | |||
|UniProt=E7EX81 | |UniProt=E7EX81 | ||
|association_with_transcript=25bp_to_ENST00000392033_5end | |||
|cluster_id=chr2:232329165..232329169,- | |||
|description=CAGE_peak_4_at_NCL_5end | |||
|id=chr2:232329165..232329169,- | |||
|ontology_enrichment_celltype=CL:0002057!5.90e-08!42;CL:0000037!6.65e-08!172;CL:0000566!6.65e-08!172;CL:0000988!1.93e-07!182;CL:0002032!6.73e-07!165;CL:0000837!6.73e-07!165;CL:0000738!6.88e-07!140 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.07e-09,168;CL:0000988,1.33e-08,177;CL:0000860,5.90e-08,42;CL:0002057,5.90e-08,42;CL:0000738,8.99e-08,136;CL:0002032,1.05e-07,161;CL:0000837,1.05e-07,161;CL:0002087,1.73e-07,115;CL:0002031,2.42e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.89e-13!239;DOID:162!6.12e-13!235;DOID:0050687!8.18e-07!143;DOID:0050686!8.71e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.97e-13,239;DOID:162,6.24e-13,235;DOID:0050687,8.31e-07,143;DOID:0050686,8.86e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@NCL | |||
}} | }} |
Latest revision as of 19:44, 15 September 2015
Short description: | p4@NCL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NCL_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000392033_5end |
EntrezGene: | NCL |
HGNC: | 7667 |
UniProt: | E7EX81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 9.07e-09 | 168 |
hematopoietic cell | 1.33e-08 | 177 |
classical monocyte | 5.90e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.90e-08 | 42 |
leukocyte | 8.99e-08 | 136 |
hematopoietic oligopotent progenitor cell | 1.05e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.05e-07 | 161 |
nongranular leukocyte | 1.73e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.42e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.97e-13 | 239 |
cancer | 6.24e-13 | 235 |
cell type cancer | 8.31e-07 | 143 |
organ system cancer | 8.86e-07 | 137 |