FFCP PHASE1:Hg19::chr1:222791045..222791068,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375056 | |EntrezGene=375056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24008 | |HGNC=24008 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JRA6 | |UniProt=Q5JRA6 | ||
|association_with_transcript=-359bp_to_ENST00000344922_5end | |association_with_transcript=-359bp_to_ENST00000344922_5end | ||
|cluster_id=chr1:222791045..222791068,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_15_at_MIA3_5end | |description=CAGE_peak_15_at_MIA3_5end | ||
|id=chr1:222791045..222791068,+ | |id=chr1:222791045..222791068,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.22e-50!34;UBERON:0003528!1.22e-50!34;UBERON:0001049!3.05e-46!57;UBERON:0005068!3.05e-46!57;UBERON:0006241!3.05e-46!57;UBERON:0007135!3.05e-46!57;UBERON:0002780!5.00e-46!41;UBERON:0001890!5.00e-46!41;UBERON:0006240!5.00e-46!41;UBERON:0003080!7.65e-45!42;UBERON:0002616!1.65e-44!59;UBERON:0001869!1.96e-43!32;UBERON:0002791!4.92e-42!33;UBERON:0001893!1.03e-40!34;UBERON:0000955!7.22e-40!69;UBERON:0006238!7.22e-40!69;UBERON:0002619!3.04e-38!22;UBERON:0001950!3.36e-36!20;UBERON:0001017!1.23e-35!82;UBERON:0005743!9.69e-34!86;UBERON:0000956!1.79e-33!25;UBERON:0000203!1.79e-33!25;UBERON:0003075!1.50e-31!86;UBERON:0007284!1.50e-31!86;UBERON:0007023!3.34e-31!115;UBERON:0000073!4.82e-30!94;UBERON:0001016!4.82e-30!94;UBERON:0002346!6.65e-30!90;UBERON:0003056!1.34e-29!61;UBERON:0000033!6.74e-24!123;UBERON:0000153!1.62e-22!129;UBERON:0007811!1.62e-22!129;UBERON:0000200!7.73e-20!6;UBERON:0002308!7.74e-19!9;UBERON:0000125!7.74e-19!9;UBERON:0001872!5.61e-16!5;UBERON:0002771!7.97e-15!3;UBERON:0000988!1.35e-14!3;UBERON:0004121!2.67e-14!169;UBERON:0000924!7.72e-14!173;UBERON:0006601!7.72e-14!173;UBERON:0000025!4.67e-13!194;UBERON:0000369!9.89e-12!4;UBERON:0002435!9.89e-12!4;UBERON:0000204!9.89e-12!4;UBERON:0010082!9.89e-12!4;UBERON:0009663!2.44e-11!7;UBERON:0001870!6.67e-11!2;UBERON:0002148!1.53e-10!2;UBERON:0009662!1.53e-10!2;UBERON:0004111!2.46e-09!241;UBERON:0002021!3.16e-09!5;UBERON:0002420!7.76e-09!9;UBERON:0007245!7.76e-09!9;UBERON:0010009!7.76e-09!9;UBERON:0010011!7.76e-09!9;UBERON:0000454!7.76e-09!9;UBERON:0002680!1.52e-08!9;UBERON:0001895!1.52e-08!9;UBERON:0010092!1.52e-08!9;UBERON:0000477!1.03e-07!286;UBERON:0005383!1.18e-07!3;UBERON:0005382!1.18e-07!3;UBERON:0006331!2.66e-07!3;UBERON:0001894!8.52e-07!7;UBERON:0006222!8.52e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;2.70e-40;1!UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0005383;1.96e-14;3!UBERON:0005382;1.96e-14;3!UBERON:0000369;3.60e-11;4!UBERON:0002435;3.60e-11;4!UBERON:0000204;3.60e-11;4!UBERON:0001872;3.35e-09;5!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22!UBERON:0009663;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,2.21e-40,1;UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0005383,1.83e-14,3;UBERON:0005382,1.83e-14,3;UBERON:0000369,3.42e-11,4;UBERON:0002435,3.42e-11,4;UBERON:0000204,3.42e-11,4;UBERON:0010082,3.42e-11,4;UBERON:0001872,3.49e-09,5;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0009663,6.04e-07,7 | |||
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|short_description=p15@MIA3 | |short_description=p15@MIA3 | ||
}} | }} |
Latest revision as of 20:09, 15 September 2015
Short description: | p15@MIA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_MIA3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -359bp_to_ENST00000344922_5end |
EntrezGene: | MIA3 |
HGNC: | 24008 |
UniProt: | Q5JRA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
putamen | 2.21e-40 | 1 |
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
caudate-putamen | 1.83e-14 | 3 |
dorsal striatum | 1.83e-14 | 3 |
corpus striatum | 3.42e-11 | 4 |
striatum | 3.42e-11 | 4 |
ventral part of telencephalon | 3.42e-11 | 4 |
future corpus striatum | 3.42e-11 | 4 |
parietal lobe | 3.49e-09 | 5 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
telencephalic nucleus | 6.04e-07 | 7 |