FFCP PHASE1:Hg19::chr2:232651136..232651176,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64708 | |EntrezGene=64708 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16760 | |HGNC=16760 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H9Q2 | |UniProt=Q9H9Q2 | ||
|association_with_transcript=0bp_to_ENST00000357490,ENST00000373608,ENST00000410017,ENST00000412591,ENST00000412922,ENST00000413197,ENST00000432387,ENST00000450501,ENST00000492423,NM_022730,uc002vsg.1,uc002vsh.1,uc002vsi.1_5end | |association_with_transcript=0bp_to_ENST00000357490,ENST00000373608,ENST00000410017,ENST00000412591,ENST00000412922,ENST00000413197,ENST00000432387,ENST00000450501,ENST00000492423,NM_022730,uc002vsg.1,uc002vsh.1,uc002vsi.1_5end | ||
|cluster_id=chr2:232651136..232651176,+ | |||
|description=CAGE_peak_1_at_COPS7B_5end | |description=CAGE_peak_1_at_COPS7B_5end | ||
|id=chr2:232651136..232651176,+ | |id=chr2:232651136..232651176,+ | ||
|ontology_enrichment_celltype=CL:0000012!1.62e-26!682;CL:0000548!3.70e-26!679;CL:0000004!3.70e-26!679;CL:0000255!3.70e-26!679;CL:0000003!1.27e-18!722;CL:0000066!3.25e-16!254;CL:0000144!3.55e-16!625;CL:0002321!5.01e-16!248;CL:0000220!3.24e-15!246;CL:0002371!3.31e-11!591;CL:0000063!2.16e-09!578;CL:0000221!1.08e-08!71;CL:0000055!1.01e-07!180;CL:0000133!7.06e-07!59 | |ontology_enrichment_celltype=CL:0000012!1.62e-26!682;CL:0000548!3.70e-26!679;CL:0000004!3.70e-26!679;CL:0000255!3.70e-26!679;CL:0000003!1.27e-18!722;CL:0000066!3.25e-16!254;CL:0000144!3.55e-16!625;CL:0002321!5.01e-16!248;CL:0000220!3.24e-15!246;CL:0002371!3.31e-11!591;CL:0000063!2.16e-09!578;CL:0000221!1.08e-08!71;CL:0000055!1.01e-07!180;CL:0000133!7.06e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:1000449;4.63e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.12e-16,253;CL:0002321,6.87e-16,250;CL:0000221,2.98e-08,72;CL:1000449,4.92e-07,15;CL:0000133,7.06e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.69e-13!235;DOID:14566!4.59e-12!239;DOID:0050686!5.47e-09!137;DOID:2531!3.37e-08!51;DOID:0060083!3.37e-08!51;DOID:1240!7.88e-07!39 | |ontology_enrichment_disease=DOID:162!6.69e-13!235;DOID:14566!4.59e-12!239;DOID:0050686!5.47e-09!137;DOID:2531!3.37e-08!51;DOID:0060083!3.37e-08!51;DOID:1240!7.88e-07!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.69e-13,235;DOID:14566,4.59e-12,239;DOID:0050686,5.47e-09,137;DOID:2531,3.37e-08,51;DOID:0060083,3.37e-08,51;DOID:1240,7.88e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.63e-07;15!UBERON:0004819;4.63e-07;15!UBERON:0001285;4.63e-07;15!UBERON:0007684;4.63e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,4.92e-07,15;UBERON:0009773,4.92e-07,15;UBERON:0001231,4.92e-07,15;UBERON:0001285,4.92e-07,15;UBERON:0007684,4.92e-07,15;UBERON:0004208,4.92e-07,15 | |||
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| ||
|short_description=p1@COPS7B | |short_description=p1@COPS7B | ||
}} | }} |
Latest revision as of 20:39, 15 September 2015
Short description: | p1@COPS7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COPS7B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000357490, ENST00000373608, ENST00000410017, ENST00000412591, ENST00000412922, ENST00000413197, ENST00000432387, ENST00000450501, ENST00000492423, NM_022730, uc002vsg.1, uc002vsh.1, uc002vsi.1_5end |
EntrezGene: | COPS7B |
HGNC: | 16760 |
UniProt: | Q9H9Q2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.12e-16 | 253 |
embryonic cell | 6.87e-16 | 250 |
ectodermal cell | 2.98e-08 | 72 |
epithelial cell of nephron | 4.92e-07 | 15 |
neurectodermal cell | 7.06e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 4.92e-07 | 15 |
renal tubule | 4.92e-07 | 15 |
nephron tubule | 4.92e-07 | 15 |
nephron | 4.92e-07 | 15 |
uriniferous tubule | 4.92e-07 | 15 |
nephrogenic mesenchyme | 4.92e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.69e-13 | 235 |
disease of cellular proliferation | 4.59e-12 | 239 |
organ system cancer | 5.47e-09 | 137 |
hematologic cancer | 3.37e-08 | 51 |
immune system cancer | 3.37e-08 | 51 |
leukemia | 7.88e-07 | 39 |