FFCP PHASE1:Hg19::chr2:233243453..233243468,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr2:233243453..233243468,+ to FFCP PHASE1:Hg19::chr2:233243453..233243468,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=250 | |EntrezGene=250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=439 | |HGNC=439 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000474529_5end | |||
|cluster_id=chr2:233243453..233243468,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_1_at_ALPP_5end | |||
|id=chr2:233243453..233243468,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.20e-18!254;CL:0002541!3.56e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.70e-11;3!CL:0002577;1.22e-09;3!CL:0000349;1.25e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.11e-16,253;CL:0002541,4.70e-11,3;CL:0002577,1.13e-09,3;CL:0000349,1.19e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.43e-20;29 | |||
|ontology_enrichment_disease=DOID:305!2.32e-33!106;DOID:0050687!5.76e-24!143;DOID:162!4.23e-16!235;DOID:14566!2.10e-15!239;DOID:1749!1.53e-11!14;DOID:299!1.79e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.47e-10;14!DOID:4929;4.29e-07;2!DOID:305;7.92e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.86e-26,106;DOID:0050687,1.22e-18,143;DOID:162,6.31e-12,235;DOID:14566,1.76e-11,239;DOID:1749,2.38e-10,14;DOID:4929,3.96e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.41e-19!9;UBERON:0008947!2.16e-15!38;UBERON:0003258!2.16e-15!38;UBERON:0003124!9.48e-14!7;UBERON:0000077!8.26e-13!130;UBERON:0004119!1.08e-12!169;UBERON:0000925!1.08e-12!169;UBERON:0006595!1.08e-12!169;UBERON:0005631!1.45e-12!14;UBERON:0000158!1.45e-12!14;UBERON:0000065!1.05e-11!53;UBERON:0001557!2.83e-11!19;UBERON:0000072!3.48e-10!46;UBERON:0001007!5.04e-10!155;UBERON:0001555!5.04e-10!155;UBERON:0007026!5.04e-10!155;UBERON:0001004!1.39e-09!72;UBERON:0004921!8.69e-09!129;UBERON:0004185!8.69e-09!129;UBERON:0000344!2.62e-08!12;UBERON:0001041!2.78e-08!98;UBERON:0001987!3.04e-08!4;UBERON:0004340!3.04e-08!4;UBERON:0004923!9.11e-08!57;UBERON:0005911!9.34e-08!82;UBERON:0000478!9.54e-08!24;UBERON:0003343!2.46e-07!4;UBERON:0004785!2.46e-07!4;UBERON:0000476!3.56e-07!3;UBERON:0000920!3.56e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.71e-31;9!UBERON:0001557;4.71e-31;9!UBERON:0001987;8.07e-13;4!UBERON:0000478;1.31e-11;24!UBERON:0000065;2.22e-11;44!UBERON:0003124;4.70e-11;3!UBERON:0000920;4.70e-11;3!UBERON:0000072;1.44e-08;37!UBERON:0005631;2.91e-08;10!UBERON:0000158;2.91e-08;10!UBERON:0001004;3.38e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.71e-31,9;UBERON:0003124,3.69e-22,7;UBERON:0005631,2.20e-17,14;UBERON:0000158,2.20e-17,14;UBERON:0001557,7.89e-17,19;UBERON:0008947,2.32e-14,38;UBERON:0003258,2.32e-14,38;UBERON:0001987,7.47e-13,4;UBERON:0004340,7.47e-13,4;UBERON:0004119,2.35e-12,160;UBERON:0000925,2.35e-12,160;UBERON:0006595,2.35e-12,160;UBERON:0000478,1.27e-11,24;UBERON:0000920,4.70e-11,3;UBERON:0000065,1.34e-10,54;UBERON:0004921,1.09e-09,118;UBERON:0001007,1.88e-08,145;UBERON:0001555,1.88e-08,145;UBERON:0007026,1.88e-08,145;UBERON:0000995,2.41e-08,21;UBERON:0001041,4.85e-08,87;UBERON:0000072,5.18e-08,47;UBERON:0005795,6.63e-08,22;UBERON:0003975,6.63e-08,22;UBERON:0001004,8.72e-08,74;UBERON:0004175,8.43e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,6.97801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512321413058201,0,0,0.645484683583826,0,0.188242339542605,0,0,0.612167784741805,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0,17.5565855763677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,1372.12226686211,1327.60443436505,1226.50513107704,1314.81444894287,1284.61720236883,1163.1005748826,1348.31308160164,1284.26948924539,1160.78217250726,0,0,0,0,0,0,0,0,75.0229475112993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94065842880137,4.99306318531491,3.32629322662648,0,0,0,0,0,0,0,0,0,0,0,0,17.0411823924187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,288.61787362527,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,283.278696537328,1.29151611801369,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,3.43056302373444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6670918705891,23.4602097857785,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,4.58328590851367,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0,0.762760950878299,6.61885508950222,0,0,0,0,0,0,0,0,0,0,0,3.00106008164809,0.341826167541004,0.23056390438806,0.269272933229316,5.64966333994442,112.607409385368,69.1561830184061,130.060485348547,0,0,0,0,0,0,0,0,0,6.03961390188847,2.12029607150911,0,0,0,0,0,0,0,0,0,0,0,2.93496928398135,0,0,0,0,0,0,0,0,0,0,0,0,0,7.46306874841063,31.7495367622584,51.8872871219199,0,0,0.387025325156341,0.219267951258557,0.328461828212837,0,0,0,0,0,0,22.0973062490327,0.320635281006135,0,122.88290989301,0,0,0,0,0,6.12804490003668,0.271808412147228,0.732219924186332,0,0,0,0,0,0,0,0,0.458320848023367,0,11.7810610294405,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0.528001682597033,0,26.292382032764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,9.39729230595713,31.2836567148335,2.48543433208317,0,0,0,15.9585314442545,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0.857766365499703,0,51.4622450912858,0,8.07631124871343,0.179088841081487,0.308801447160972,105.256343797779,0,0,0,0,21.4166811873343,0,0,0,0,0,0,3.93236654005951,0.211312123358627,0,0,0,0,0,0,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07962490351128,0.11796972334774,0.733714394086716,28.3037882068329,0,0,0,0.451261970095544,0,0,0.261906694481422,0.818859587550484,2.95712172434091,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,894.031188869237,0,0,0,0,0.590969204419841,1.4460082245969,0,0,2.80272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3717709013787,0,0,0.894843454382338,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01988829741982,0,7.07590726418306,0,0,0,0,0,0,0,0.0645889098360061,0,0.448527450322454,0,0,0,0,0,0.0717222053926763,0,1.05824249194267,28.1760193117169,0,12.4857030928156,11.7320471201727,0.733448665097199,0.813792356631477,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,6.97801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512321413058201,0,0,0.645484683583826,0,0.188242339542605,0,0,0.612167784741805,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0,17.5565855763677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,1372.12226686211,1327.60443436505,1226.50513107704,1314.81444894287,1284.61720236883,1163.1005748826,1348.31308160164,1284.26948924539,1160.78217250726,0,0,0,0,0,0,0,0,75.0229475112993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94065842880137,4.99306318531491,3.32629322662648,0,0,0,0,0,0,0,0,0,0,0,0,17.0411823924187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,288.61787362527,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,283.278696537328,1.29151611801369,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,3.43056302373444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6670918705891,23.4602097857785,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,4.58328590851367,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0,0.762760950878299,6.61885508950222,0,0,0,0,0,0,0,0,0,0,0,3.00106008164809,0.341826167541004,0.23056390438806,0.269272933229316,5.64966333994442,112.607409385368,69.1561830184061,130.060485348547,0,0,0,0,0,0,0,0,0,6.03961390188847,2.12029607150911,0,0,0,0,0,0,0,0,0,0,0,2.93496928398135,0,0,0,0,0,0,0,0,0,0,0,0,0,7.46306874841063,31.7495367622584,51.8872871219199,0,0,0.387025325156341,0.219267951258557,0.328461828212837,0,0,0,0,0,0,22.0973062490327,0.320635281006135,0,122.88290989301,0,0,0,0,0,6.12804490003668,0.271808412147228,0.732219924186332,0,0,0,0,0,0,0,0,0.458320848023367,0,11.7810610294405,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0.528001682597033,0,26.292382032764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,9.39729230595713,31.2836567148335,2.48543433208317,0,0,0,15.9585314442545,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0.857766365499703,0,51.4622450912858,0,8.07631124871343,0.179088841081487,0.308801447160972,105.256343797779,0,0,0,0,21.4166811873343,0,0,0,0,0,0,3.93236654005951,0.211312123358627,0,0,0,0,0,0,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07962490351128,0.11796972334774,0.733714394086716,28.3037882068329,0,0,0,0.451261970095544,0,0,0.261906694481422,0.818859587550484,2.95712172434091,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,894.031188869237,0,0,0,0,0.590969204419841,1.4460082245969,0,0,2.80272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3717709013787,0,0,0.894843454382338,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01988829741982,0,7.07590726418306,0,0,0,0,0,0,0,0.0645889098360061,0,0.448527450322454,0,0,0,0,0,0.0717222053926763,0,1.05824249194267,28.1760193117169,0,12.4857030928156,11.7320471201727,0.733448665097199,0.813792356631477,0,0,0 | ||
|short_description=p1@ALPP | |||
}} | }} |
Latest revision as of 21:03, 15 September 2015
Short description: | p1@ALPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALPP_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 19bp_to_ENST00000474529_5end |
EntrezGene: | ALPP |
HGNC: | 439 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.11e-16 | 253 |
chorionic membrane mesenchymal stem cell | 4.70e-11 | 3 |
placental epithelial cell | 1.13e-09 | 3 |
extraembryonic cell | 1.19e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.71e-31 | 9 |
chorion | 3.69e-22 | 7 |
extraembryonic membrane | 2.20e-17 | 14 |
membranous layer | 2.20e-17 | 14 |
upper respiratory tract | 7.89e-17 | 19 |
respiratory primordium | 2.32e-14 | 38 |
endoderm of foregut | 2.32e-14 | 38 |
placenta | 7.47e-13 | 4 |
allantois | 7.47e-13 | 4 |
endoderm-derived structure | 2.35e-12 | 160 |
endoderm | 2.35e-12 | 160 |
presumptive endoderm | 2.35e-12 | 160 |
extraembryonic structure | 1.27e-11 | 24 |
egg chorion | 4.70e-11 | 3 |
respiratory tract | 1.34e-10 | 54 |
subdivision of digestive tract | 1.09e-09 | 118 |
digestive system | 1.88e-08 | 145 |
digestive tract | 1.88e-08 | 145 |
primitive gut | 1.88e-08 | 145 |
uterus | 2.41e-08 | 21 |
foregut | 4.85e-08 | 87 |
segment of respiratory tract | 5.18e-08 | 47 |
embryonic uterus | 6.63e-08 | 22 |
internal female genitalia | 6.63e-08 | 22 |
respiratory system | 8.72e-08 | 74 |
internal genitalia | 8.43e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.86e-26 | 106 |
cell type cancer | 1.22e-18 | 143 |
cancer | 6.31e-12 | 235 |
disease of cellular proliferation | 1.76e-11 | 239 |
squamous cell carcinoma | 2.38e-10 | 14 |
tubular adenocarcinoma | 3.96e-07 | 2 |