FFCP PHASE1:Hg19::chr8:120221313..120221336,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=13634 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=205bp_to_ENST00000531508_5end | |||
|cluster_id=chr8:120221313..120221336,+ | |||
|description=CAGE_peak_5_at_MAL2_5end | |||
|id=chr8:120221313..120221336,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.17e-27!254;CL:0000223!5.90e-15!59;CL:0002076!8.65e-15!43 | |||
|ontology_enrichment_celltype_v019=CL:0002537;5.18e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.49e-20,253;CL:0002537,6.28e-08,5;CL:0002076,1.24e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.84e-17;29 | |||
|ontology_enrichment_disease=DOID:305!4.89e-55!106;DOID:0050687!2.38e-37!143;DOID:162!8.70e-19!235;DOID:14566!7.21e-18!239;DOID:299!1.41e-17!25;DOID:1749!9.00e-16!14;DOID:193!8.99e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.75e-22;14!DOID:305;7.79e-17;106!DOID:299;3.30e-14;25!DOID:3493;3.09e-09;2!DOID:0050615;1.02e-08;16!DOID:4468;1.16e-08;2!DOID:4362;5.18e-08;5!DOID:0050687;3.37e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.28e-51,106;DOID:0050687,6.15e-36,143;DOID:162,4.25e-25,235;DOID:14566,2.23e-24,239;DOID:1749,5.95e-22,14;DOID:299,2.65e-14,25;DOID:3493,2.43e-09,2;DOID:4468,1.04e-08,2;DOID:0050615,1.19e-08,16;DOID:4362,5.72e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.05e-17!169;UBERON:0000925!1.05e-17!169;UBERON:0006595!1.05e-17!169;UBERON:0001007!7.00e-17!155;UBERON:0001555!7.00e-17!155;UBERON:0007026!7.00e-17!155;UBERON:0004921!3.63e-15!129;UBERON:0004185!3.63e-15!129;UBERON:0000077!2.33e-14!130;UBERON:0000065!4.52e-13!53;UBERON:0001737!5.64e-12!9;UBERON:0001004!8.96e-12!72;UBERON:0000072!2.02e-11!46;UBERON:0000344!2.70e-11!12;UBERON:0001041!6.19e-11!98;UBERON:0008947!1.21e-10!38;UBERON:0003258!1.21e-10!38;UBERON:0000062!4.09e-09!511;UBERON:0001557!4.98e-09!19;UBERON:0005911!2.27e-08!82;UBERON:0000064!5.03e-08!219;UBERON:0005156!4.28e-07!59;UBERON:0000990!4.28e-07!59;UBERON:0000466!6.71e-07!126;UBERON:0003729!8.49e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.86e-20;9!UBERON:0001557;4.86e-20;9!UBERON:0000072;8.79e-12;37!UBERON:0000065;2.73e-10;44!UBERON:0001004;1.13e-08;65!UBERON:0000002;9.75e-07;6!UBERON:0001560;9.75e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.61e-20,9;UBERON:0000065,8.10e-13,54;UBERON:0008947,2.63e-12,38;UBERON:0003258,2.63e-12,38;UBERON:0001557,1.14e-11,19;UBERON:0001004,2.49e-11,74;UBERON:0000072,3.20e-11,47;UBERON:0004921,1.35e-09,118;UBERON:0004119,2.73e-09,160;UBERON:0000925,2.73e-09,160;UBERON:0006595,2.73e-09,160;UBERON:0001041,4.27e-09,87;UBERON:0001007,8.82e-09,145;UBERON:0001555,8.82e-09,145;UBERON:0007026,8.82e-09,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,1.8929088006375,1.51726221070292,1.68707720918437,1.7647035637183,0.653638332277218,0.71181185733329,1.21348177344148,1.17732879075208,1.15424147083917,0,0,0,0,0,0.982827216677626,0,0,0.737930631258681,0,0,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.736647911487171,0,0,0,0,1.15523005656622,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81813406897076,1.34533047155574,0.127612712494584,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24568648489864,0,0,0,0,4.29740072527842,1.18785872333055,3.37876772309155,0,0,0,0,0,0,0,0.755798243562828,0,0,0,5.0326276642503,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0.7812832832557,0.787139999965761,0,6.03105275913148,2.54253650292766,0.709163045303809,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,1.41620002574687,4.1827123283581,0,0,0,0.269272933229316,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.26598838716816,1.79556088975062,0.706765357169704,0.216388639742091,0,0.265372693510018,0,0,0,0,0.134802265961354,0,0,0,0.782658475728359,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,3.13070500632772,0,0.173559738335131,1.66587075604442,3.22119064347489,0.17472666824203,0,1.9351266257817,2.48503678093031,1.64230914106418,0.193978032976839,0,0.225980740780532,0,0,0.50648636764703,1.36885967914362,0.561111741760736,0.426905989478705,0.599428828746391,3.45817001169854,0,0,8.06706868733638,0,2.35694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0.945398187686684,0.741742725430498,0.741438982396034,0,0,0,0.136203406111576,0,0.412618309791701,0.415440338029185,0,0.77380195455795,0.121499113316049,1.67717343799633,0.157611414598396,0.157363764404994,0,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,2.11444506695002,0,0,0,0,0,0,17.2352139597949,0,0,0,0,2.98402782875445,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,1.47918486351039,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0.41023272848151,0,0.207471757392654,0,0,1.96295437002051,0.707818340086442,0.917142992608395,1.61735932610474,0,0,0,0.0752103283492573,0,0,0,0,0.887136517302272,0.135075169236789,0.781078098613847,0.206686796501184,0.317079050969534,0,0,0,0,1.53314913167514,0,0,0.606965604236632,0.455324382702595,0,0,0,0,0.0657727735628491,0.590969204419841,1.66847102838104,0.156986185701028,0.314231179832004,5.32517110296199,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,1.8328549483524,0.62041277132864,0.955538938977433,0.447421727191169,1.66855397145913,6.33973209907801,0,0,0,0,0,0.198950775161368,0,4.06605895340256,0,1.05673990496671,0.385870790539723,0.437119121007915,0.940634592723046,0,0,0,0,0.4226557275834,0,0,0,0,1.42843150884526,0.705789743431384,2.88868920081006,0.730336388246517,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0.253397002022874,0.203977659483963,0.26721740526556,0.459474497674225,0.250707539292375,0,0,0,0,0.639701945702943,0,0,0.0620747142958579,0.112131862580613,0.12729431655633,0.202117188958219,0.217716747896961,0,0.202056159043763,0.430333232356058,0.665320713092027,2.03508171527436,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@MAL2 | |||
}} |
Latest revision as of 21:14, 15 September 2015
Short description: | p5@MAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MAL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 205bp_to_ENST00000531508_5end |
EntrezGene: | NA |
HGNC: | 13634 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.49e-20 | 253 |
amnion mesenchymal stem cell | 6.28e-08 | 5 |
endo-epithelial cell | 1.24e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.61e-20 | 9 |
respiratory tract | 8.10e-13 | 54 |
respiratory primordium | 2.63e-12 | 38 |
endoderm of foregut | 2.63e-12 | 38 |
upper respiratory tract | 1.14e-11 | 19 |
respiratory system | 2.49e-11 | 74 |
segment of respiratory tract | 3.20e-11 | 47 |
subdivision of digestive tract | 1.35e-09 | 118 |
endoderm-derived structure | 2.73e-09 | 160 |
endoderm | 2.73e-09 | 160 |
presumptive endoderm | 2.73e-09 | 160 |
foregut | 4.27e-09 | 87 |
digestive system | 8.82e-09 | 145 |
digestive tract | 8.82e-09 | 145 |
primitive gut | 8.82e-09 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.28e-51 | 106 |
cell type cancer | 6.15e-36 | 143 |
cancer | 4.25e-25 | 235 |
disease of cellular proliferation | 2.23e-24 | 239 |
squamous cell carcinoma | 5.95e-22 | 14 |
adenocarcinoma | 2.65e-14 | 25 |
signet ring cell adenocarcinoma | 2.43e-09 | 2 |
clear cell adenocarcinoma | 1.04e-08 | 2 |
respiratory system cancer | 1.19e-08 | 16 |
cervical cancer | 5.72e-08 | 5 |