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FFCP PHASE1:Hg19::chr2:233320827..233320853,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=248
|EntrezGene=248
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=437
|HGNC=437
|TSSclassifier=strong
|UniProt=P09923,F8WEQ0
|UniProt=P09923,F8WEQ0
|association_with_transcript=0bp_to_ENST00000295463,ENST00000457560,NM_001631,uc002vst.3_5end
|association_with_transcript=0bp_to_ENST00000295463,ENST00000457560,NM_001631,uc002vst.3_5end
|cluster_id=chr2:233320827..233320853,+
|coexpression_cluster_id=C285
|description=CAGE_peak_2_at_ALPI_5end
|description=CAGE_peak_2_at_ALPI_5end
|id=chr2:233320827..233320853,+
|id=chr2:233320827..233320853,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=CL:0002563;8.21e-09;4
|ontology_enrichment_celltype_v019_2=CL:0002563,8.21e-09,4
|ontology_enrichment_development_v019=UBERON:0008947;1.54e-26;29!UBERON:0006595;1.58e-09;86
|ontology_enrichment_disease=DOID:305!7.83e-10!106;DOID:0050687!6.18e-08!143
|ontology_enrichment_disease=DOID:305!7.83e-10!106;DOID:0050687!6.18e-08!143
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=DOID:305,6.53e-09,106
|ontology_enrichment_uberon=UBERON:0001737!6.36e-39!9;UBERON:0001557!2.80e-21!19;UBERON:0004921!1.47e-14!129;UBERON:0004185!1.47e-14!129;UBERON:0008947!5.86e-14!38;UBERON:0003258!5.86e-14!38;UBERON:0000160!2.07e-13!27;UBERON:0000059!2.52e-13!11;UBERON:0000072!5.78e-13!46;UBERON:0001007!2.77e-12!155;UBERON:0001555!2.77e-12!155;UBERON:0007026!2.77e-12!155;UBERON:0001155!1.31e-11!9;UBERON:0000063!2.42e-11!97;UBERON:0000065!7.14e-11!53;UBERON:0004119!9.03e-11!169;UBERON:0000925!9.03e-11!169;UBERON:0006595!9.03e-11!169;UBERON:0005409!5.43e-10!35;UBERON:0004907!5.08e-08!5;UBERON:0000077!2.46e-07!130;UBERON:0001004!2.84e-07!72
|ontology_enrichment_uberon_v019=UBERON:0001737;2.57e-72;9!UBERON:0001557;2.57e-72;9!UBERON:0000160;2.71e-34;17!UBERON:0005409;1.43e-26;22!UBERON:0000072;6.19e-19;37!UBERON:0000059;1.10e-17;11!UBERON:0000065;1.48e-16;44!UBERON:0004921;1.26e-15;33!UBERON:0002108;2.87e-15;4!UBERON:0001155;3.10e-14;9!UBERON:0001242;8.21e-09;4!UBERON:0001262;8.21e-09;4!UBERON:0004786;8.21e-09;4!UBERON:0004808;8.21e-09;4!UBERON:0001277;8.21e-09;4!UBERON:0001052;1.10e-08;4!UBERON:0001004;1.04e-07;65!UBERON:0004907;4.09e-07;5
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.46e-72,9;UBERON:0000160,2.55e-34,17;UBERON:0001557,1.24e-33,19;UBERON:0004921,3.22e-26,118;UBERON:0005409,2.22e-23,25;UBERON:0001007,1.02e-20,145;UBERON:0001555,1.02e-20,145;UBERON:0007026,1.02e-20,145;UBERON:0008947,6.90e-20,38;UBERON:0003258,6.90e-20,38;UBERON:0004119,1.87e-18,160;UBERON:0000925,1.87e-18,160;UBERON:0006595,1.87e-18,160;UBERON:0000059,1.04e-17,11;UBERON:0000072,8.95e-16,47;UBERON:0002108,2.87e-15,4;UBERON:0001155,2.99e-14,9;UBERON:0000065,1.60e-13,54;UBERON:0011216,1.78e-13,223;UBERON:0001041,1.89e-09,87;UBERON:0001004,1.97e-09,74;UBERON:0001242,8.21e-09,4;UBERON:0001262,8.21e-09,4;UBERON:0004786,8.21e-09,4;UBERON:0004808,8.21e-09,4;UBERON:0001277,8.21e-09,4;UBERON:0001052,1.08e-08,4;UBERON:0004907,4.03e-07,5
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|short_description=p2@ALPI
|short_description=p2@ALPI
}}
}}

Latest revision as of 21:24, 15 September 2015

Short description:p2@ALPI
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_ALPI_5end
Coexpression cluster:C285_cervical_Hep2_small_colon_temporal_duodenum_bronchogenic
Association with transcript: 0bp_to_ENST00000295463, ENST00000457560, NM_001631, uc002vst.3_5end
EntrezGene:ALPI
HGNC: 437
UniProt: P09923F8WEQ0
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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