FFCP PHASE1:Hg19::chr9:13175870..13175885,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8777 | |EntrezGene=8777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7208 | |HGNC=7208 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000319198,uc003zkz.3_5end | |association_with_transcript=5bp_to_ENST00000319198,uc003zkz.3_5end | ||
|cluster_id=chr9:13175870..13175885,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_9_at_MPDZ_5end | |description=CAGE_peak_9_at_MPDZ_5end | ||
|id=chr9:13175870..13175885,- | |id=chr9:13175870..13175885,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;3.17e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002368!6.68e-10!35;UBERON:0002530!1.31e-09!59;UBERON:0002107!5.65e-08!19;UBERON:0006925!5.65e-08!19;UBERON:0008836!5.65e-08!19;UBERON:0000949!7.85e-08!45;UBERON:0003929!1.98e-07!54;UBERON:0000955!5.51e-07!69;UBERON:0006238!5.51e-07!69;UBERON:0007023!6.52e-07!115;UBERON:0001049!7.16e-07!57;UBERON:0005068!7.16e-07!57;UBERON:0006241!7.16e-07!57;UBERON:0007135!7.16e-07!57 | |ontology_enrichment_uberon=UBERON:0002368!6.68e-10!35;UBERON:0002530!1.31e-09!59;UBERON:0002107!5.65e-08!19;UBERON:0006925!5.65e-08!19;UBERON:0008836!5.65e-08!19;UBERON:0000949!7.85e-08!45;UBERON:0003929!1.98e-07!54;UBERON:0000955!5.51e-07!69;UBERON:0006238!5.51e-07!69;UBERON:0007023!6.52e-07!115;UBERON:0001049!7.16e-07!57;UBERON:0005068!7.16e-07!57;UBERON:0006241!7.16e-07!57;UBERON:0007135!7.16e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;3.17e-15;1!UBERON:0002082;3.17e-15;1!UBERON:0002107;2.09e-12;19!UBERON:0006925;2.09e-12;19!UBERON:0002108;2.59e-12;4!UBERON:0002423;1.71e-09;25!UBERON:0002365;1.22e-07;31!UBERON:0002330;1.22e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,2.75e-15,1;UBERON:0002082,2.75e-15,1;UBERON:0010226,2.75e-15,1;UBERON:0002107,2.12e-12,19;UBERON:0006925,2.12e-12,19;UBERON:0008836,2.12e-12,19;UBERON:0002108,2.38e-12,4;UBERON:0008835,9.53e-11,22;UBERON:0003894,9.53e-11,22;UBERON:0009854,2.72e-10,23;UBERON:0007499,1.73e-09,25;UBERON:0009497,1.73e-09,25;UBERON:0000015,1.73e-09,25;UBERON:0002423,1.73e-09,25;UBERON:0006235,1.73e-09,25;UBERON:0004161,1.73e-09,25;UBERON:0009856,3.93e-09,26;UBERON:0002365,1.08e-07,31;UBERON:0002330,1.08e-07,31;UBERON:0002368,7.77e-07,35 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.4212083572394,0.982827216677626,13.5881678536723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0321770383514,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,16.192733733606,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.412079291905832,0.539228350833479,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,2.67939404817274,0.419636705079985,0,0.179287339332845,0,0,1.32418394073086,0,0,0,0,0,0,0.170388021785422,0,10.4052085911439,2.65013777824443,0,0.26446520348538,0.171086837884329,0,0,0,0,0,0,0,0,0,0,2.14441903734423,4.26234419922746,0,0,0,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0.151230923763239,0.310874401165561,0.295710299979268,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0.336283722218824,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0.31020638566432,0,0,0,0.365753774946808,0,0,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,2.84127428655144,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.4212083572394,0.982827216677626,13.5881678536723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0321770383514,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,16.192733733606,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.412079291905832,0.539228350833479,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,2.67939404817274,0.419636705079985,0,0.179287339332845,0,0,1.32418394073086,0,0,0,0,0,0,0.170388021785422,0,10.4052085911439,2.65013777824443,0,0.26446520348538,0.171086837884329,0,0,0,0,0,0,0,0,0,0,2.14441903734423,4.26234419922746,0,0,0,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0.151230923763239,0.310874401165561,0.295710299979268,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0.336283722218824,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0.31020638566432,0,0,0,0.365753774946808,0,0,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,2.84127428655144,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | ||
|short_description=p9@MPDZ | |short_description=p9@MPDZ | ||
}} | }} |
Latest revision as of 21:33, 15 September 2015
Short description: | p9@MPDZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MPDZ_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 5bp_to_ENST00000319198, uc003zkz.3_5end |
EntrezGene: | MPDZ |
HGNC: | 7208 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 2.75e-15 | 1 |
cardiac ventricle | 2.75e-15 | 1 |
future cardiac ventricle | 2.75e-15 | 1 |
liver | 2.12e-12 | 19 |
digestive gland | 2.12e-12 | 19 |
liver bud | 2.12e-12 | 19 |
small intestine | 2.38e-12 | 4 |
hepatic diverticulum | 9.53e-11 | 22 |
liver primordium | 9.53e-11 | 22 |
digestive tract diverticulum | 2.72e-10 | 23 |
epithelial sac | 1.73e-09 | 25 |
epithelium of foregut-midgut junction | 1.73e-09 | 25 |
anatomical boundary | 1.73e-09 | 25 |
hepatobiliary system | 1.73e-09 | 25 |
foregut-midgut junction | 1.73e-09 | 25 |
septum transversum | 1.73e-09 | 25 |
sac | 3.93e-09 | 26 |
exocrine gland | 1.08e-07 | 31 |
exocrine system | 1.08e-07 | 31 |
endocrine gland | 7.77e-07 | 35 |