FFCP PHASE1:Hg19::chr3:149192475..149192496,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7104 | |EntrezGene=7104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11856 | |HGNC=11856 | ||
|TSSclassifier=strong | |||
|UniProt=C9JVD2 | |UniProt=C9JVD2 | ||
|association_with_transcript=0bp_to_ENST00000465758_5end | |association_with_transcript=0bp_to_ENST00000465758_5end | ||
|cluster_id=chr3:149192475..149192496,+ | |||
|description=CAGE_peak_1_at_TM4SF4_5end | |description=CAGE_peak_1_at_TM4SF4_5end | ||
|id=chr3:149192475..149192496,+ | |id=chr3:149192475..149192496,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.47e-08!12;CL:0000417!2.47e-08!12;CL:0000668!2.47e-08!12;CL:0000414!2.47e-08!12;CL:0000412!2.47e-08!12;CL:0000182!2.47e-08!12;CL:0000632!5.96e-07!2 | |ontology_enrichment_celltype=CL:0000181!2.47e-08!12;CL:0000417!2.47e-08!12;CL:0000668!2.47e-08!12;CL:0000414!2.47e-08!12;CL:0000412!2.47e-08!12;CL:0000182!2.47e-08!12;CL:0000632!5.96e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000632;4.12e-08;3!CL:0000182;8.10e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,3.76e-08,3;CL:0000182,8.10e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;5.58e-11;13!UBERON:0004161;1.07e-08;11!UBERON:0006242;2.09e-07;1 | |||
|ontology_enrichment_disease=DOID:4468!3.82e-07!2 | |ontology_enrichment_disease=DOID:4468!3.82e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:4468;3.81e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.70e-12,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000160;1.51e-23;17!UBERON:0005409;2.77e-22;22!UBERON:0002423;5.77e-21;25!UBERON:0002107;6.16e-18;19!UBERON:0006925;6.16e-18;19!UBERON:0004921;6.96e-14;33!UBERON:0001007;9.67e-13;81!UBERON:0000059;2.79e-12;11!UBERON:0002108;6.12e-11;4!UBERON:0002365;1.17e-10;31!UBERON:0002330;1.17e-10;31!UBERON:0004907;3.52e-10;5!UBERON:0001155;6.14e-10;9!UBERON:0002368;3.43e-09;33!UBERON:0000949;4.87e-07;43!UBERON:0005172;7.33e-07;52!UBERON:0005173;7.33e-07;52 | |||
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| ||
|short_description=p1@TM4SF4 | |short_description=p1@TM4SF4 | ||
}} | }} |
Latest revision as of 21:33, 15 September 2015
Short description: | p1@TM4SF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TM4SF4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000465758_5end |
EntrezGene: | TM4SF4 |
HGNC: | 11856 |
UniProt: | C9JVD2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 3.76e-08 | 3 |
hepatocyte | 8.10e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.70e-12 | 2 |