FFCP PHASE1:Hg19::chr17:47824582..47824596,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81558 | |EntrezGene=81558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24179 | |HGNC=24179 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000515240_5end | |||
|cluster_id=chr17:47824582..47824596,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_4_at_FAM117A_5end | |||
|id=chr17:47824582..47824596,- | |||
|ontology_enrichment_celltype=CL:0000542!7.39e-47!53;CL:0000051!7.39e-47!53;CL:0000838!2.90e-45!52;CL:0000945!1.50e-34!24;CL:0000826!1.50e-34!24;CL:0000037!1.83e-25!172;CL:0000566!1.83e-25!172;CL:0000738!8.69e-25!140;CL:0000988!4.13e-23!182;CL:0002032!9.98e-23!165;CL:0000837!9.98e-23!165;CL:0002087!1.85e-21!119;CL:0000236!7.09e-21!14;CL:0002031!7.25e-21!124;CL:0000084!6.76e-13!25;CL:0000827!6.76e-13!25;CL:0000791!4.41e-10!18;CL:0000789!4.41e-10!18;CL:0002420!4.41e-10!18;CL:0002419!4.41e-10!18;CL:0000790!4.41e-10!18;CL:0000625!1.26e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.38e-78;24!CL:0000236;8.34e-50;13!CL:0000542;1.21e-30;53!CL:0000946;9.74e-07;1!CL:0000786;9.74e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.98e-78,24;CL:0000826,1.98e-78,24;CL:0000236,5.02e-55,14;CL:0000838,5.62e-46,52;CL:0000542,5.13e-45,53;CL:0000051,5.13e-45,53;CL:0002087,9.49e-20,115;CL:0002031,1.01e-18,120;CL:0000738,6.11e-16,136;CL:0002032,1.94e-15,161;CL:0000837,1.94e-15,161;CL:0000037,1.42e-14,168;CL:0000988,1.46e-13,177;CL:0000946,8.97e-07,1;CL:0000786,8.97e-07,1;CL:0000980,8.97e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;1.21e-30;53!UBERON:0004872;3.18e-07;7 | |||
|ontology_enrichment_disease=DOID:0060058!9.32e-09!10;DOID:2531!5.44e-08!51;DOID:0060083!5.44e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.90e-09;10!DOID:630;6.60e-07;1!DOID:0050177;6.60e-07;1!DOID:0050427;6.60e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.01e-08,10;DOID:630,6.80e-07,1;DOID:0050177,6.80e-07,1;DOID:0050427,6.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!9.88e-14!15;UBERON:0000179!9.88e-14!15;UBERON:0000463!9.88e-14!15;UBERON:0004177!1.08e-12!7;UBERON:0002370!1.58e-07!4;UBERON:0005058!1.58e-07!4;UBERON:0009113!1.58e-07!4;UBERON:0003295!1.58e-07!4;UBERON:0005562!1.58e-07!4;UBERON:0007023!2.35e-07!115;UBERON:0002106!7.91e-07!3;UBERON:0004854!7.91e-07!3;UBERON:0009034!7.91e-07!3;UBERON:0002095!7.91e-07!3;UBERON:0004782!7.91e-07!3;UBERON:0003281!7.91e-07!3;UBERON:0009664!7.91e-07!3;UBERON:0002296!7.91e-07!3;UBERON:0005602!7.91e-07!3;UBERON:0001179!7.91e-07!3;UBERON:0006293!7.91e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.05e-08;15!UBERON:0000179;2.05e-08;15!UBERON:0000463;2.05e-08;15!UBERON:0002106;6.04e-08;3!UBERON:0002372;9.74e-07;1!UBERON:0001961;9.74e-07;1!UBERON:0001744;9.74e-07;1!UBERON:0001042;9.74e-07;1!UBERON:0001735;9.74e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.44e-08,15;UBERON:0000179,2.44e-08,15;UBERON:0000463,2.44e-08,15;UBERON:0002106,8.00e-08,3;UBERON:0004854,8.00e-08,3;UBERON:0009034,8.00e-08,3;UBERON:0002095,8.00e-08,3;UBERON:0004782,8.00e-08,3;UBERON:0003281,8.00e-08,3;UBERON:0009664,8.00e-08,3;UBERON:0002296,8.00e-08,3;UBERON:0005602,8.00e-08,3;UBERON:0001179,8.00e-08,3;UBERON:0006293,8.00e-08,3;UBERON:0002372,9.48e-07,1;UBERON:0001961,9.48e-07,1;UBERON:0001744,9.48e-07,1;UBERON:0001735,9.48e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98674854944673,2.79142004129816,2.75487734597877,0.393364276848904,0,0,0,0,0,2.40148321798935,2.27470771979874,0,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70215567407342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,8.7382177801941,4.44754626931777,8.10787422876364,6.4063357925762,6.8970292794538,11.2377628373427,4.77026877267682,3.98449078376614,2.93618594685469,4.58727873750275,0,0.560508562981536,0,0,0,0,0.501559486172034,0,0,0,0.334231370655521,0.294605907474837,0,0,0.25618263945135,0.130059347559878,0,0,0,0,0,0,1.35971211237079,0.383220493601921,0.34362744548263,0.253019692019503,0,0.651083453856419,2.85135613334512,0.150575119077773,0.383959833463255,0,0.473554504088034,1.64225599384209,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,1.70894156152249,1.42939065274673,0.822724546172388,1.29694662238543,1.08006287447623,0.79312517629427,0,0,0,0.743212700502875,0,0.284567373393656,0.159426272728822,0.199579371432817,0.383010740264733,0,0,1.68478306868075,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,2.11742430127209,0,0,0,0,0,0,0,0,0.211125408127993,0.398495976502139,1.93398740871803,0,0,1.72318727645497,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,1.2558420511602,0,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0.707660516026713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.213574825135389,0,0,1.9846640872478,2.37133958277533,0.243585196761792,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65038171378292,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0.657887425858975,1.03132620757723,2.39858774219829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0.193766729508018,0.931120714437869,0,0,0,0,0,2.42467390852515,0.358611026963382,0,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,3.8468219076388 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98674854944673,2.79142004129816,2.75487734597877,0.393364276848904,0,0,0,0,0,2.40148321798935,2.27470771979874,0,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70215567407342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,8.7382177801941,4.44754626931777,8.10787422876364,6.4063357925762,6.8970292794538,11.2377628373427,4.77026877267682,3.98449078376614,2.93618594685469,4.58727873750275,0,0.560508562981536,0,0,0,0,0.501559486172034,0,0,0,0.334231370655521,0.294605907474837,0,0,0.25618263945135,0.130059347559878,0,0,0,0,0,0,1.35971211237079,0.383220493601921,0.34362744548263,0.253019692019503,0,0.651083453856419,2.85135613334512,0.150575119077773,0.383959833463255,0,0.473554504088034,1.64225599384209,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,1.70894156152249,1.42939065274673,0.822724546172388,1.29694662238543,1.08006287447623,0.79312517629427,0,0,0,0.743212700502875,0,0.284567373393656,0.159426272728822,0.199579371432817,0.383010740264733,0,0,1.68478306868075,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,2.11742430127209,0,0,0,0,0,0,0,0,0.211125408127993,0.398495976502139,1.93398740871803,0,0,1.72318727645497,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,1.2558420511602,0,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0.707660516026713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.213574825135389,0,0,1.9846640872478,2.37133958277533,0.243585196761792,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65038171378292,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0.657887425858975,1.03132620757723,2.39858774219829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0.193766729508018,0.931120714437869,0,0,0,0,0,2.42467390852515,0.358611026963382,0,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,3.8468219076388 | ||
|short_description=p4@FAM117A | |||
}} | }} |
Latest revision as of 21:38, 15 September 2015
Short description: | p4@FAM117A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM117A_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 28bp_to_ENST00000515240_5end |
EntrezGene: | FAM117A |
HGNC: | 24179 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.98e-78 | 24 |
pro-B cell | 1.98e-78 | 24 |
B cell | 5.02e-55 | 14 |
lymphoid lineage restricted progenitor cell | 5.62e-46 | 52 |
lymphocyte | 5.13e-45 | 53 |
common lymphoid progenitor | 5.13e-45 | 53 |
nongranular leukocyte | 9.49e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 1.01e-18 | 120 |
leukocyte | 6.11e-16 | 136 |
hematopoietic oligopotent progenitor cell | 1.94e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.94e-15 | 161 |
hematopoietic stem cell | 1.42e-14 | 168 |
hematopoietic cell | 1.46e-13 | 177 |
antibody secreting cell | 8.97e-07 | 1 |
plasma cell | 8.97e-07 | 1 |
plasmablast | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 2.44e-08 | 15 |
haemolymphatic fluid | 2.44e-08 | 15 |
organism substance | 2.44e-08 | 15 |
spleen | 8.00e-08 | 3 |
gastrointestinal system mesentery | 8.00e-08 | 3 |
stomach region | 8.00e-08 | 3 |
mesentery | 8.00e-08 | 3 |
gastrointestinal system serosa | 8.00e-08 | 3 |
mesentery of stomach | 8.00e-08 | 3 |
gut mesentery | 8.00e-08 | 3 |
dorsal mesentery | 8.00e-08 | 3 |
dorsal mesogastrium | 8.00e-08 | 3 |
peritoneal cavity | 8.00e-08 | 3 |
spleen primordium | 8.00e-08 | 3 |
tonsil | 9.48e-07 | 1 |
mucosa-associated lymphoid tissue | 9.48e-07 | 1 |
lymphoid tissue | 9.48e-07 | 1 |
tonsillar ring | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.01e-08 | 10 |
genetic disease | 6.80e-07 | 1 |
monogenic disease | 6.80e-07 | 1 |
xeroderma pigmentosum | 6.80e-07 | 1 |