FFCP PHASE1:Hg19::chr12:103351694..103351704,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=429 | |EntrezGene=429 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=738 | |HGNC=738 | ||
|TSSclassifier=strong | |||
|UniProt=P50553 | |UniProt=P50553 | ||
|association_with_transcript=230bp_to_ENST00000266744_5end | |||
|cluster_id=chr12:103351694..103351704,+ | |||
|coexpression_cluster_id=C740 | |||
|description=CAGE_peak_6_at_ASCL1_5end | |||
|id=chr12:103351694..103351704,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.31e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!1.03e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:169;6.05e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.84e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.81e-47!57;UBERON:0005068!4.81e-47!57;UBERON:0006241!4.81e-47!57;UBERON:0007135!4.81e-47!57;UBERON:0001017!2.14e-44!82;UBERON:0000073!2.93e-44!94;UBERON:0001016!2.93e-44!94;UBERON:0005743!6.50e-42!86;UBERON:0002616!2.26e-36!59;UBERON:0001893!1.92e-35!34;UBERON:0002780!2.18e-34!41;UBERON:0001890!2.18e-34!41;UBERON:0006240!2.18e-34!41;UBERON:0003080!1.94e-33!42;UBERON:0002791!2.92e-33!33;UBERON:0003075!1.02e-32!86;UBERON:0007284!1.02e-32!86;UBERON:0002020!5.42e-32!34;UBERON:0003528!5.42e-32!34;UBERON:0000955!7.45e-32!69;UBERON:0006238!7.45e-32!69;UBERON:0002346!7.10e-31!90;UBERON:0001869!8.66e-31!32;UBERON:0002619!1.43e-29!22;UBERON:0000956!4.53e-29!25;UBERON:0000203!4.53e-29!25;UBERON:0001950!9.46e-29!20;UBERON:0003056!2.55e-23!61;UBERON:0004121!5.23e-23!169;UBERON:0000924!3.09e-22!173;UBERON:0006601!3.09e-22!173;UBERON:0007023!2.39e-19!115;UBERON:0000153!3.54e-17!129;UBERON:0007811!3.54e-17!129;UBERON:0000033!6.82e-16!123;UBERON:0003076!2.17e-14!15;UBERON:0003057!2.17e-14!15;UBERON:0002298!8.28e-13!8;UBERON:0000200!3.21e-12!6;UBERON:0000025!1.45e-11!194;UBERON:0001872!1.95e-10!5;UBERON:0002021!6.20e-10!5;UBERON:0002240!6.60e-10!3;UBERON:0001896!1.07e-09!3;UBERON:0005290!1.07e-09!3;UBERON:0010096!1.07e-09!3;UBERON:0002771!1.29e-09!3;UBERON:0001871!4.60e-09!7;UBERON:0004733!3.77e-08!12;UBERON:0002028!3.77e-08!12;UBERON:0007277!3.77e-08!12;UBERON:0000064!7.60e-08!219;UBERON:0004111!1.14e-07!241;UBERON:0004732!1.79e-07!13;UBERON:0000483!2.47e-07!309;UBERON:0000119!3.57e-07!312;UBERON:0000477!7.77e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.52e-10;10!UBERON:0000013;2.31e-09;5!UBERON:0002410;2.31e-09;5!UBERON:0001872;2.62e-09;5!UBERON:0000178;7.05e-07;15!UBERON:0000179;7.05e-07;15!UBERON:0000463;7.05e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.52e-10,10;UBERON:0000358,4.52e-10,10;UBERON:0000307,4.52e-10,10;UBERON:0000091,4.52e-10,10;UBERON:0000087,4.52e-10,10;UBERON:0007010,4.52e-10,10;UBERON:0007806,4.52e-10,10;UBERON:0008780,4.52e-10,10;UBERON:0005728,4.52e-10,10;UBERON:0000013,2.68e-09,5;UBERON:0002410,2.68e-09,5;UBERON:0001872,3.17e-09,5;UBERON:0000178,7.05e-07,15;UBERON:0000179,7.05e-07,15;UBERON:0000463,7.05e-07,15 | |||
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| ||
|short_description=p6@ASCL1 | |||
}} | }} |
Latest revision as of 21:54, 15 September 2015
Short description: | p6@ASCL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ASCL1_5end |
Coexpression cluster: | C740_gastrointestinal_smallcell_small_nonsmall_neuroblastoma_temporal_somatostatinoma |
Association with transcript: | 230bp_to_ENST00000266744_5end |
EntrezGene: | ASCL1 |
HGNC: | 738 |
UniProt: | P50553 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.52e-10 | 10 |
blastocyst | 4.52e-10 | 10 |
blastula | 4.52e-10 | 10 |
bilaminar disc | 4.52e-10 | 10 |
inner cell mass | 4.52e-10 | 10 |
cleaving embryo | 4.52e-10 | 10 |
connecting stalk | 4.52e-10 | 10 |
inner cell mass derived epiblast | 4.52e-10 | 10 |
extraembryonic mesoderm | 4.52e-10 | 10 |
sympathetic nervous system | 2.68e-09 | 5 |
autonomic nervous system | 2.68e-09 | 5 |
parietal lobe | 3.17e-09 | 5 |
blood | 7.05e-07 | 15 |
haemolymphatic fluid | 7.05e-07 | 15 |
organism substance | 7.05e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.84e-08 | 6 |