FFCP PHASE1:Hg19::chr10:102505297..102505302,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:102505297..102505302,+
|short_description=p11@PAX2
|description=CAGE_peak_11_at_PAX2_5end
|association_with_transcript=-165bp_to_ENST00000355243,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5076 | |EntrezGene=5076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8616 | |HGNC=8616 | ||
|TSSclassifier=strong | |||
|UniProt=Q02962 | |UniProt=Q02962 | ||
|association_with_transcript=-165bp_to_ENST00000355243,ENST00000361791,ENST00000370294,ENST00000370296,ENST00000428433,NM_000278,NM_003987,NM_003988,NM_003989,NM_003990,uc001krk.3,uc001krl.3,uc001krm.3,uc001krn.3,uc001kro.3,uc010qps.1_5end | |||
|cluster_id=chr10:102505297..102505302,+ | |||
|coexpression_cluster_id=C1556 | |||
|description=CAGE_peak_11_at_PAX2_5end | |||
|id=chr10:102505297..102505302,+ | |||
|ontology_enrichment_celltype=CL:1000497!1.50e-27!18;CL:0002518!1.50e-27!18;CL:1000507!6.73e-21!12;CL:1000494!6.73e-21!12;CL:1000449!5.56e-20!16;CL:0002681!4.11e-14!13;CL:0002584!4.11e-14!13;CL:0000650!2.87e-08!3;CL:1000618!2.87e-08!3;CL:1001318!2.87e-08!3;CL:0002173!2.87e-08!3;CL:1000500!2.87e-08!3;CL:1000612!2.03e-07!7;CL:1000746!2.03e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000650;8.34e-18;2!CL:1000500;8.34e-18;2!CL:1000618;8.34e-18;2!CL:1001318;8.34e-18;2!CL:0002173;8.34e-18;2!CL:0000669;1.38e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,1.27e-17,2;CL:1000500,1.27e-17,2;CL:1000618,1.27e-17,2;CL:1001318,1.27e-17,2;CL:0002173,1.27e-17,2;CL:0000669,1.70e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.34e-18;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1115;1.33e-07;20 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,1.38e-07,20 | |||
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|short_description=p11@PAX2 | |||
}} | }} |
Latest revision as of 22:09, 15 September 2015
Short description: | p11@PAX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PAX2_5end |
Coexpression cluster: | C1556_epididymis_seminal_Renal_ductus_kidney_rhabdomyosarcoma_renal |
Association with transcript: | -165bp_to_ENST00000355243, ENST00000361791, ENST00000370294, ENST00000370296, ENST00000428433, NM_000278, NM_003987, NM_003988, NM_003989, NM_003990, uc001krk.3, uc001krl.3, uc001krm.3, uc001krn.3, uc001kro.3, uc010qps.1_5end |
EntrezGene: | PAX2 |
HGNC: | 8616 |
UniProt: | Q02962 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 1.27e-17 | 2 |
kidney interstitial cell | 1.27e-17 | 2 |
juxtaglomerular complex cell | 1.27e-17 | 2 |
renal interstitial pericyte | 1.27e-17 | 2 |
extraglomerular mesangial cell | 1.27e-17 | 2 |
pericyte cell | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 1.38e-07 | 20 |