FFCP PHASE1:Hg19::chr12:103889739..103889754,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374470 | |EntrezGene=374470 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24729 | |HGNC=24729 | ||
|TSSclassifier=strong | |||
|UniProt=Q96LP6,F8VV63,F8VX61 | |UniProt=Q96LP6,F8VV63,F8VX61 | ||
|association_with_transcript=0bp_to_ENST00000315192,ENST00000378113,ENST00000547347,ENST00000548048,ENST00000548196,ENST00000548883,ENST00000551134,NM_001099336,NM_198521,uc001tjs.2,uc001tjt.2,uc001tju.2,uc009zuf.1_5end | |association_with_transcript=0bp_to_ENST00000315192,ENST00000378113,ENST00000547347,ENST00000548048,ENST00000548196,ENST00000548883,ENST00000551134,NM_001099336,NM_198521,uc001tjs.2,uc001tjt.2,uc001tju.2,uc009zuf.1_5end | ||
|cluster_id=chr12:103889739..103889754,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_C12orf42_5end | |description=CAGE_peak_3_at_C12orf42_5end | ||
|id=chr12:103889739..103889754,- | |id=chr12:103889739..103889754,- | ||
|ontology_enrichment_celltype=CL:0000623!8.63e-11!3;CL:0000825!8.63e-11!3;CL:0000838!8.03e-09!52;CL:0000542!1.33e-08!53;CL:0000051!1.33e-08!53 | |ontology_enrichment_celltype=CL:0000623!8.63e-11!3;CL:0000825!8.63e-11!3;CL:0000838!8.03e-09!52;CL:0000542!1.33e-08!53;CL:0000051!1.33e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0002553;2.70e-40;1!CL:0000333;3.35e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.21e-40,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;7.01e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.25e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002619!1.50e-36!22;UBERON:0002020!1.26e-35!34;UBERON:0003528!1.26e-35!34;UBERON:0001950!3.02e-35!20;UBERON:0002791!2.30e-33!33;UBERON:0001893!2.85e-32!34;UBERON:0000956!7.25e-32!25;UBERON:0000203!7.25e-32!25;UBERON:0001049!1.10e-31!57;UBERON:0005068!1.10e-31!57;UBERON:0006241!1.10e-31!57;UBERON:0007135!1.10e-31!57;UBERON:0001869!8.85e-31!32;UBERON:0002616!2.06e-30!59;UBERON:0000955!5.83e-27!69;UBERON:0006238!5.83e-27!69;UBERON:0002780!4.43e-26!41;UBERON:0001890!4.43e-26!41;UBERON:0006240!4.43e-26!41;UBERON:0003080!2.32e-25!42;UBERON:0001017!7.27e-24!82;UBERON:0005743!1.81e-22!86;UBERON:0000073!1.24e-21!94;UBERON:0001016!1.24e-21!94;UBERON:0003075!5.25e-19!86;UBERON:0007284!5.25e-19!86;UBERON:0002346!6.75e-18!90;UBERON:0001871!3.89e-16!7;UBERON:0003056!3.96e-16!61;UBERON:0007023!1.36e-15!115;UBERON:0002298!1.17e-14!8;UBERON:0000153!4.44e-14!129;UBERON:0007811!4.44e-14!129;UBERON:0000033!1.56e-12!123;UBERON:0000349!3.32e-12!5;UBERON:0002021!1.01e-11!5;UBERON:0001896!4.44e-11!3;UBERON:0005290!4.44e-11!3;UBERON:0010096!4.44e-11!3;UBERON:0000988!2.18e-10!3;UBERON:0004733!1.42e-09!12;UBERON:0002028!1.42e-09!12;UBERON:0007277!1.42e-09!12;UBERON:0004121!2.94e-09!169;UBERON:0000924!6.67e-09!173;UBERON:0006601!6.67e-09!173;UBERON:0001876!8.55e-09!2;UBERON:0004732!8.61e-09!13;UBERON:0002148!1.53e-07!2;UBERON:0009662!1.53e-07!2;UBERON:0003076!1.54e-07!15;UBERON:0003057!1.54e-07!15;UBERON:0000025!2.39e-07!194;UBERON:0001872!7.84e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0000013;3.35e-09;5!UBERON:0002410;3.35e-09;5!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0000013,3.49e-09,5;UBERON:0002410,3.49e-09,5;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22 | |||
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| ||
|short_description=p3@C12orf42 | |short_description=p3@C12orf42 | ||
}} | }} |
Latest revision as of 22:44, 15 September 2015
Short description: | p3@C12orf42 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C12orf42_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000315192, ENST00000378113, ENST00000547347, ENST00000548048, ENST00000548196, ENST00000548883, ENST00000551134, NM_001099336, NM_198521, uc001tjs.2, uc001tjt.2, uc001tju.2, uc009zuf.1_5end |
EntrezGene: | C12orf42 |
HGNC: | 24729 |
UniProt: | Q96LP6F8VV63F8VX61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.21e-40 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
sympathetic nervous system | 3.49e-09 | 5 |
autonomic nervous system | 3.49e-09 | 5 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.25e-08 | 6 |