FFCP PHASE1:Hg19::chr10:102891048..102891078,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3195 | |EntrezGene=3195 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5056 | |HGNC=5056 | ||
|TSSclassifier=strong | |||
|UniProt=A1L4G3,P31314 | |UniProt=A1L4G3,P31314 | ||
|association_with_transcript=0bp_to_ENST00000467928,NM_001195517,NM_005521,uc001ksw.2_5end | |association_with_transcript=0bp_to_ENST00000467928,NM_001195517,NM_005521,uc001ksw.2_5end | ||
|cluster_id=chr10:102891048..102891078,+ | |||
|coexpression_cluster_id=C253 | |coexpression_cluster_id=C253 | ||
|description=CAGE_peak_1_at_TLX1_5end | |description=CAGE_peak_1_at_TLX1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:1000413!1.37e-07!9 | |ontology_enrichment_celltype=CL:1000413!1.37e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.95e-07;1!CL:0000164;1.95e-07;1!CL:0000502;1.95e-07;1!CL:0000172;1.95e-07;1!CL:0000173;1.95e-07;1 | |ontology_enrichment_celltype_v019=CL:0000167;1.95e-07;1!CL:0000164;1.95e-07;1!CL:0000502;1.95e-07;1!CL:0000172;1.95e-07;1!CL:0000173;1.95e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.95e-07,1;CL:0000164,1.95e-07,1;CL:0000502,1.95e-07,1;CL:0000172,1.95e-07,1;CL:0000173,1.95e-07,1;CL:0002351,1.95e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006298;8.00e-08;1!CL:0002351;1.95e-07;1 | |ontology_enrichment_development_v019=UBERON:0006298;8.00e-08;1!CL:0002351;1.95e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;1.95e-07;1 | |ontology_enrichment_disease_v019=DOID:4430;1.95e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,1.95e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003915!1.37e-07!9;UBERON:0004700!1.37e-07!9;UBERON:0001917!1.37e-07!9 | |ontology_enrichment_uberon=UBERON:0003915!1.37e-07!9;UBERON:0004700!1.37e-07!9;UBERON:0001917!1.37e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.10e-09;3!UBERON:0001723;3.52e-09;3!UBERON:0001033;3.52e-09;3!UBERON:0001736;8.00e-08;1!UBERON:0002346;2.62e-07;4!UBERON:0000923;2.62e-07;4!UBERON:0010316;2.62e-07;4!UBERON:0005291;2.62e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002106;1.10e-09;3!UBERON:0001723;3.52e-09;3!UBERON:0001033;3.52e-09;3!UBERON:0001736;8.00e-08;1!UBERON:0002346;2.62e-07;4!UBERON:0000923;2.62e-07;4!UBERON:0010316;2.62e-07;4!UBERON:0005291;2.62e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.10e-09,3;UBERON:0004854,1.10e-09,3;UBERON:0009034,1.10e-09,3;UBERON:0002095,1.10e-09,3;UBERON:0004782,1.10e-09,3;UBERON:0003281,1.10e-09,3;UBERON:0009664,1.10e-09,3;UBERON:0002296,1.10e-09,3;UBERON:0005602,1.10e-09,3;UBERON:0001179,1.10e-09,3;UBERON:0006293,1.10e-09,3;UBERON:0001723,3.38e-09,3;UBERON:0001033,3.38e-09,3;UBERON:0010056,3.38e-09,3;UBERON:0001736,8.00e-08,1;UBERON:0006298,8.00e-08,1;UBERON:0000945,1.05e-07,8;UBERON:0010039,1.05e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,1.04142150482278,0.56530794192401,1.25849830862972,0.550236083880135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0.300343057843917,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,1.22520107990516,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,1.22896305723383,0.223676107892416,1.50164227540718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.398495976502139,0,2.26739473068848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17115059862197,0,3.47249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0.335643173951685,2.08729105996604,0,0,0,0.424059214301822,3.89499551535764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,6.31358361540869,7.2581733978073,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0.0633107959558787,1.17330829640882,0,0,0.19980960958213,2.16135625731159,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.830091809617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640150378164845,0,0,0,0,0,0,0,0,0,6.28010360829893,0,0,0.558644917973244,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,1.39241355481392,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,8.61769097362141,0,5.89272019466115,0.672567444437648,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,1.26410889386181,23.4807679243613,0.347716544605159,0,0,0.17071847709395,0,21.0811405821936,0.946656005844523,2.64161554753389,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0.467878926924211,0,0.356760272332706,0,1.31928620094515,0,0,0,0,0,2.35676547101626,0,0,0,0,25.9395613624396,55.6271573211971,0,0,0,0,0,22.4777348868225,0,0,0,0,0,0,0,0,0,0,1.26698501011437,0.61193297845189,0,0,0,0,0,0,0,0,0,0,0.993195428733726,0,0,0,3.70118471424834,2.39563310759697,0.202056159043763,1.00411087549747,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,1.04142150482278,0.56530794192401,1.25849830862972,0.550236083880135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0.300343057843917,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,1.22520107990516,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,1.22896305723383,0.223676107892416,1.50164227540718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.398495976502139,0,2.26739473068848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17115059862197,0,3.47249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0.335643173951685,2.08729105996604,0,0,0,0.424059214301822,3.89499551535764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,6.31358361540869,7.2581733978073,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0.0633107959558787,1.17330829640882,0,0,0.19980960958213,2.16135625731159,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.830091809617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640150378164845,0,0,0,0,0,0,0,0,0,6.28010360829893,0,0,0.558644917973244,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,1.39241355481392,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,8.61769097362141,0,5.89272019466115,0.672567444437648,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,1.26410889386181,23.4807679243613,0.347716544605159,0,0,0.17071847709395,0,21.0811405821936,0.946656005844523,2.64161554753389,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0.467878926924211,0,0.356760272332706,0,1.31928620094515,0,0,0,0,0,2.35676547101626,0,0,0,0,25.9395613624396,55.6271573211971,0,0,0,0,0,22.4777348868225,0,0,0,0,0,0,0,0,0,0,1.26698501011437,0.61193297845189,0,0,0,0,0,0,0,0,0,0,0.993195428733726,0,0,0,3.70118471424834,2.39563310759697,0.202056159043763,1.00411087549747,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p1@TLX1 | |short_description=p1@TLX1 | ||
}} | }} |
Latest revision as of 22:57, 15 September 2015
Short description: | p1@TLX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TLX1_5end |
Coexpression cluster: | C253_spleen_rhabdomyosarcoma_Hepatocyte_small_uterus_liver_rectum |
Association with transcript: | 0bp_to_ENST00000467928, NM_001195517, NM_005521, uc001ksw.2_5end |
EntrezGene: | TLX1 |
HGNC: | 5056 |
UniProt: | A1L4G3P31314 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.95e-07 | 1 |
enteroendocrine cell | 1.95e-07 | 1 |
type D enteroendocrine cell | 1.95e-07 | 1 |
somatostatin secreting cell | 1.95e-07 | 1 |
pancreatic D cell | 1.95e-07 | 1 |
progenitor cell of endocrine pancreas | 1.95e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.10e-09 | 3 |
gastrointestinal system mesentery | 1.10e-09 | 3 |
stomach region | 1.10e-09 | 3 |
mesentery | 1.10e-09 | 3 |
gastrointestinal system serosa | 1.10e-09 | 3 |
mesentery of stomach | 1.10e-09 | 3 |
gut mesentery | 1.10e-09 | 3 |
dorsal mesentery | 1.10e-09 | 3 |
dorsal mesogastrium | 1.10e-09 | 3 |
peritoneal cavity | 1.10e-09 | 3 |
spleen primordium | 1.10e-09 | 3 |
tongue | 3.38e-09 | 3 |
gustatory system | 3.38e-09 | 3 |
future tongue | 3.38e-09 | 3 |
submandibular gland | 8.00e-08 | 1 |
submandibular gland primordium | 8.00e-08 | 1 |
stomach | 1.05e-07 | 8 |
food storage organ | 1.05e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.95e-07 | 1 |