FFCP PHASE1:Hg19::chr10:102891168..102891197,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:102891168..102891197,+
|short_description=p3@TLX1
|description=CAGE_peak_3_at_TLX1_5end
|association_with_transcript=107bp_to_ENST00000467928,NM_001195517...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3195 | |EntrezGene=3195 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5056 | |HGNC=5056 | ||
|UniProt=A1L4G3, | |TSSclassifier=strong | ||
|UniProt=A1L4G3,P31314 | |||
|association_with_transcript=107bp_to_ENST00000467928,NM_001195517,NM_005521,uc001ksw.2_5end | |||
|cluster_id=chr10:102891168..102891197,+ | |||
|coexpression_cluster_id=C253 | |||
|description=CAGE_peak_3_at_TLX1_5end | |||
|id=chr10:102891168..102891197,+ | |||
|ontology_enrichment_celltype=CL:1000413!2.73e-12!9;CL:0002544!7.32e-09!6;CL:0002563!8.01e-08!4;CL:0002253!1.55e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1000413;7.68e-15;9!CL:0002544;7.36e-13;6!CL:0000167;1.91e-09;1!CL:0000164;1.91e-09;1!CL:0000502;1.91e-09;1!CL:0000172;1.91e-09;1!CL:0000173;1.91e-09;1!CL:0000071;1.65e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,6.89e-15,9;CL:0002544,5.99e-13,6;CL:0000167,2.08e-09,1;CL:0000164,2.08e-09,1;CL:0000502,2.08e-09,1;CL:0000172,2.08e-09,1;CL:0000173,2.08e-09,1;CL:0002351,2.08e-09,1;CL:0000071,1.57e-07,18;CL:0002546,1.57e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006298;6.31e-10;1!CL:0002351;1.91e-09;1!CL:0002546;1.65e-07;18 | |||
|ontology_enrichment_disease=DOID:154!3.11e-07!2;DOID:4236!3.11e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.91e-09;1!DOID:171;4.01e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.08e-09,1;DOID:171,4.32e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0003915!2.73e-12!9;UBERON:0004700!2.73e-12!9;UBERON:0001917!2.73e-12!9;UBERON:0001242!8.01e-08!4;UBERON:0001262!8.01e-08!4;UBERON:0004786!8.01e-08!4;UBERON:0004808!8.01e-08!4;UBERON:0001277!8.01e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;7.68e-15;9!UBERON:0004700;7.68e-15;9!UBERON:0001917;7.68e-15;9!UBERON:0002106;1.25e-12;3!UBERON:0001736;6.31e-10;1!UBERON:0002346;1.62e-09;4!UBERON:0000923;1.62e-09;4!UBERON:0010316;1.62e-09;4!UBERON:0005291;1.62e-09;4!UBERON:0004177;6.40e-08;5!UBERON:0005057;6.40e-08;5!UBERON:0002050;8.82e-08;5!UBERON:0005423;8.82e-08;5!UBERON:0004638;1.65e-07;18!UBERON:0001986;1.65e-07;18!UBERON:0004852;1.65e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,6.89e-15,9;UBERON:0004700,6.89e-15,9;UBERON:0001917,6.89e-15,9;UBERON:0002106,1.21e-12,3;UBERON:0004854,1.21e-12,3;UBERON:0009034,1.21e-12,3;UBERON:0002095,1.21e-12,3;UBERON:0004782,1.21e-12,3;UBERON:0003281,1.21e-12,3;UBERON:0009664,1.21e-12,3;UBERON:0002296,1.21e-12,3;UBERON:0005602,1.21e-12,3;UBERON:0001179,1.21e-12,3;UBERON:0006293,1.21e-12,3;UBERON:0000945,2.49e-10,8;UBERON:0010039,2.49e-10,8;UBERON:0001736,5.79e-10,1;UBERON:0006298,5.79e-10,1;UBERON:0004638,1.57e-07,18;UBERON:0001986,1.57e-07,18;UBERON:0004852,1.57e-07,18 | |||
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| ||
|short_description=p3@TLX1 | |||
}} | }} |
Latest revision as of 22:58, 15 September 2015
Short description: | p3@TLX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TLX1_5end |
Coexpression cluster: | C253_spleen_rhabdomyosarcoma_Hepatocyte_small_uterus_liver_rectum |
Association with transcript: | 107bp_to_ENST00000467928, NM_001195517, NM_005521, uc001ksw.2_5end |
EntrezGene: | TLX1 |
HGNC: | 5056 |
UniProt: | A1L4G3P31314 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 6.89e-15 | 9 |
aortic endothelial cell | 5.99e-13 | 6 |
peptide hormone secreting cell | 2.08e-09 | 1 |
enteroendocrine cell | 2.08e-09 | 1 |
type D enteroendocrine cell | 2.08e-09 | 1 |
somatostatin secreting cell | 2.08e-09 | 1 |
pancreatic D cell | 2.08e-09 | 1 |
progenitor cell of endocrine pancreas | 2.08e-09 | 1 |
blood vessel endothelial cell | 1.57e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.57e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 6.89e-15 | 9 |
arterial system endothelium | 6.89e-15 | 9 |
endothelium of artery | 6.89e-15 | 9 |
spleen | 1.21e-12 | 3 |
gastrointestinal system mesentery | 1.21e-12 | 3 |
stomach region | 1.21e-12 | 3 |
mesentery | 1.21e-12 | 3 |
gastrointestinal system serosa | 1.21e-12 | 3 |
mesentery of stomach | 1.21e-12 | 3 |
gut mesentery | 1.21e-12 | 3 |
dorsal mesentery | 1.21e-12 | 3 |
dorsal mesogastrium | 1.21e-12 | 3 |
peritoneal cavity | 1.21e-12 | 3 |
spleen primordium | 1.21e-12 | 3 |
stomach | 2.49e-10 | 8 |
food storage organ | 2.49e-10 | 8 |
submandibular gland | 5.79e-10 | 1 |
submandibular gland primordium | 5.79e-10 | 1 |
blood vessel endothelium | 1.57e-07 | 18 |
endothelium | 1.57e-07 | 18 |
cardiovascular system endothelium | 1.57e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.08e-09 | 1 |
neuroectodermal tumor | 4.32e-08 | 10 |