FFCP PHASE1:Hg19::chr2:234580502..234580512,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54600 | |EntrezGene=54600 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12541 | |HGNC=12541 | ||
|TSSclassifier=strong | |||
|UniProt=O60656 | |UniProt=O60656 | ||
|association_with_transcript=3bp_to_ENST00000354728_5end | |association_with_transcript=3bp_to_ENST00000354728_5end | ||
|cluster_id=chr2:234580502..234580512,+ | |||
|coexpression_cluster_id=C51 | |coexpression_cluster_id=C51 | ||
|description=CAGE_peak_2_at_UGT1A9_5end | |description=CAGE_peak_2_at_UGT1A9_5end | ||
|id=chr2:234580502..234580512,+ | |id=chr2:234580502..234580512,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.34e-10!12;CL:0000417!1.34e-10!12;CL:0000668!1.34e-10!12;CL:0000414!1.34e-10!12;CL:0000412!1.34e-10!12;CL:0000182!1.34e-10!12 | |ontology_enrichment_celltype=CL:0000181!1.34e-10!12;CL:0000417!1.34e-10!12;CL:0000668!1.34e-10!12;CL:0000414!1.34e-10!12;CL:0000412!1.34e-10!12;CL:0000182!1.34e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.04e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.13e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0003918;5.40e-17;10!UBERON:0007687;5.40e-17;10!UBERON:0003104;5.15e-10;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.66e-11!19;UBERON:0006925!1.66e-11!19;UBERON:0008836!1.66e-11!19;UBERON:0005172!2.17e-11!55;UBERON:0005173!2.17e-11!55;UBERON:0002417!3.25e-10!61;UBERON:0000916!3.25e-10!61;UBERON:0008835!5.70e-10!22;UBERON:0003894!5.70e-10!22;UBERON:0009854!1.51e-09!23;UBERON:0007499!8.42e-09!25;UBERON:0009497!8.42e-09!25;UBERON:0000015!8.42e-09!25;UBERON:0002423!8.42e-09!25;UBERON:0006235!8.42e-09!25;UBERON:0004161!8.42e-09!25;UBERON:0003929!1.64e-08!54;UBERON:0005057!1.80e-08!26;UBERON:0009856!1.80e-08!26;UBERON:0002365!3.90e-07!31;UBERON:0002330!3.90e-07!31 | |ontology_enrichment_uberon=UBERON:0002107!1.66e-11!19;UBERON:0006925!1.66e-11!19;UBERON:0008836!1.66e-11!19;UBERON:0005172!2.17e-11!55;UBERON:0005173!2.17e-11!55;UBERON:0002417!3.25e-10!61;UBERON:0000916!3.25e-10!61;UBERON:0008835!5.70e-10!22;UBERON:0003894!5.70e-10!22;UBERON:0009854!1.51e-09!23;UBERON:0007499!8.42e-09!25;UBERON:0009497!8.42e-09!25;UBERON:0000015!8.42e-09!25;UBERON:0002423!8.42e-09!25;UBERON:0006235!8.42e-09!25;UBERON:0004161!8.42e-09!25;UBERON:0003929!1.64e-08!54;UBERON:0005057!1.80e-08!26;UBERON:0009856!1.80e-08!26;UBERON:0002365!3.90e-07!31;UBERON:0002330!3.90e-07!31 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.77e-15;19!UBERON:0006925;1.77e-15;19!UBERON:0005172;3.02e-12;52!UBERON:0005173;3.02e-12;52!UBERON:0002423;7.47e-12;25!UBERON:0002365;6.22e-10;31!UBERON:0002330;6.22e-10;31!UBERON:0002417;3.78e-08;58!UBERON:0000916;3.78e-08;58!UBERON:0002368;4.43e-08;33!UBERON:0002113;1.95e-07;24!UBERON:0011143;1.95e-07;24!UBERON:0000949;7.57e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,4.62e-16,54;UBERON:0005173,4.62e-16,54;UBERON:0002107,1.81e-15,19;UBERON:0006925,1.81e-15,19;UBERON:0008836,1.81e-15,19;UBERON:0002417,1.99e-14,60;UBERON:0000916,1.99e-14,60;UBERON:0008835,2.06e-13,22;UBERON:0003894,2.06e-13,22;UBERON:0009854,7.59e-13,23;UBERON:0007499,7.58e-12,25;UBERON:0009497,7.58e-12,25;UBERON:0000015,7.58e-12,25;UBERON:0002423,7.58e-12,25;UBERON:0006235,7.58e-12,25;UBERON:0004161,7.58e-12,25;UBERON:0009856,2.10e-11,26;UBERON:0002365,1.29e-09,31;UBERON:0002330,1.29e-09,31;UBERON:0002368,1.49e-08,35;UBERON:0005177,1.97e-08,101;UBERON:0009569,1.46e-07,112;UBERON:0002113,6.56e-07,26;UBERON:0003918,6.56e-07,26;UBERON:0011143,6.56e-07,26;UBERON:0005095,6.56e-07,26;UBERON:0007687,6.56e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,68.8949937117968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.8159062679296,6.87979051674338,4.72631925345123,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2500697238629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7094131048652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,136.412679334912,33.5709364063988,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8448652921781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53744911152768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96633459802829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,68.8949937117968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.8159062679296,6.87979051674338,4.72631925345123,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2500697238629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7094131048652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,136.412679334912,33.5709364063988,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8448652921781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53744911152768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96633459802829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@UGT1A9 | |short_description=p2@UGT1A9 | ||
}} | }} |
Latest revision as of 23:23, 15 September 2015
Short description: | p2@UGT1A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UGT1A9_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 3bp_to_ENST00000354728_5end |
EntrezGene: | UGT1A9 |
HGNC: | 12541 |
UniProt: | O60656 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.13e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 4.62e-16 | 54 |
abdominal segment element | 4.62e-16 | 54 |
liver | 1.81e-15 | 19 |
digestive gland | 1.81e-15 | 19 |
liver bud | 1.81e-15 | 19 |
abdominal segment of trunk | 1.99e-14 | 60 |
abdomen | 1.99e-14 | 60 |
hepatic diverticulum | 2.06e-13 | 22 |
liver primordium | 2.06e-13 | 22 |
digestive tract diverticulum | 7.59e-13 | 23 |
epithelial sac | 7.58e-12 | 25 |
epithelium of foregut-midgut junction | 7.58e-12 | 25 |
anatomical boundary | 7.58e-12 | 25 |
hepatobiliary system | 7.58e-12 | 25 |
foregut-midgut junction | 7.58e-12 | 25 |
septum transversum | 7.58e-12 | 25 |
sac | 2.10e-11 | 26 |
exocrine gland | 1.29e-09 | 31 |
exocrine system | 1.29e-09 | 31 |
endocrine gland | 1.49e-08 | 35 |
trunk region element | 1.97e-08 | 101 |
subdivision of trunk | 1.46e-07 | 112 |
kidney | 6.56e-07 | 26 |
kidney mesenchyme | 6.56e-07 | 26 |
upper urinary tract | 6.56e-07 | 26 |
kidney rudiment | 6.56e-07 | 26 |
kidney field | 6.56e-07 | 26 |