Personal tools

FFCP PHASE1:Hg19::chr5:147582387..147582396,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=404203
|EntrezGene=404203
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=29486
|HGNC=29486
|TSSclassifier=strong
|UniProt=Q6UWN8
|UniProt=Q6UWN8
|association_with_transcript=-7bp_to_ENST00000325630,uc003lpa.2_5end
|association_with_transcript=-7bp_to_ENST00000325630,uc003lpa.2_5end
|cluster_id=chr5:147582387..147582396,+
|coexpression_cluster_id=C106
|coexpression_cluster_id=C106
|description=CAGE_peak_7_at_SPINK6_5end
|description=CAGE_peak_7_at_SPINK6_5end
Line 9: Line 14:
|ontology_enrichment_celltype=CL:0002159!7.14e-27!13;CL:0000622!1.04e-14!5;CL:0002166!5.59e-14!3;CL:0000154!2.80e-12!6;CL:0000317!2.02e-10!2;CL:1000448!2.02e-10!2;CL:0002308!2.02e-10!2;CL:0002140!2.02e-10!2;CL:0000575!5.07e-10!2;CL:0002077!1.30e-09!33;CL:0000362!1.49e-09!8;CL:0000066!2.00e-09!254;CL:0000150!3.28e-08!9;CL:0000221!1.44e-07!71
|ontology_enrichment_celltype=CL:0002159!7.14e-27!13;CL:0000622!1.04e-14!5;CL:0002166!5.59e-14!3;CL:0000154!2.80e-12!6;CL:0000317!2.02e-10!2;CL:1000448!2.02e-10!2;CL:0002308!2.02e-10!2;CL:0002140!2.02e-10!2;CL:0000575!5.07e-10!2;CL:0002077!1.30e-09!33;CL:0000362!1.49e-09!8;CL:0000066!2.00e-09!254;CL:0000150!3.28e-08!9;CL:0000221!1.44e-07!71
|ontology_enrichment_celltype_v019=CL:0000317;2.23e-25;2!CL:1000448;2.23e-25;2!CL:0002308;2.23e-25;2!CL:0002140;2.23e-25;2!CL:0002159;3.33e-14;14!CL:0000362;8.16e-13;9!CL:0000622;9.38e-11;5!CL:0000154;4.11e-09;6!CL:0000575;2.18e-07;2
|ontology_enrichment_celltype_v019=CL:0000317;2.23e-25;2!CL:1000448;2.23e-25;2!CL:0002308;2.23e-25;2!CL:0002140;2.23e-25;2!CL:0002159;3.33e-14;14!CL:0000362;8.16e-13;9!CL:0000622;9.38e-11;5!CL:0000154;4.11e-09;6!CL:0000575;2.18e-07;2
|ontology_enrichment_celltype_v019_2=CL:0000317,3.05e-25,2;CL:1000448,3.05e-25,2;CL:0002308,3.05e-25,2;CL:0002140,3.05e-25,2;CL:0002159,3.63e-14,14;CL:0000362,9.22e-13,9;CL:0000622,1.06e-10,5;CL:0000066,2.58e-09,253;CL:0000154,4.55e-09,6;CL:0000575,2.12e-07,2
|ontology_enrichment_development_v019=UBERON:0008947;4.80e-34;29
|ontology_enrichment_development_v019=UBERON:0008947;4.80e-34;29
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=DOID:305,1.09e-10,106;DOID:0050687,1.36e-07,143
|ontology_enrichment_uberon=UBERON:0001737!2.78e-42!9;UBERON:0001557!3.92e-19!19;UBERON:0008947!1.24e-10!38;UBERON:0003258!1.24e-10!38;UBERON:0001708!1.31e-10!4;UBERON:0001704!1.31e-10!4;UBERON:0002419!2.02e-10!2;UBERON:0007771!2.02e-10!2;UBERON:0003297!2.02e-10!2;UBERON:0001821!2.02e-10!2;UBERON:0003487!2.02e-10!2;UBERON:0001820!2.02e-10!2;UBERON:0005089!2.02e-10!2;UBERON:0005088!2.02e-10!2;UBERON:0001004!1.62e-09!72;UBERON:0000065!1.49e-08!53;UBERON:0000072!1.91e-08!46;UBERON:0002090!3.24e-07!6
|ontology_enrichment_uberon=UBERON:0001737!2.78e-42!9;UBERON:0001557!3.92e-19!19;UBERON:0008947!1.24e-10!38;UBERON:0003258!1.24e-10!38;UBERON:0001708!1.31e-10!4;UBERON:0001704!1.31e-10!4;UBERON:0002419!2.02e-10!2;UBERON:0007771!2.02e-10!2;UBERON:0003297!2.02e-10!2;UBERON:0001821!2.02e-10!2;UBERON:0003487!2.02e-10!2;UBERON:0001820!2.02e-10!2;UBERON:0005089!2.02e-10!2;UBERON:0005088!2.02e-10!2;UBERON:0001004!1.62e-09!72;UBERON:0000065!1.49e-08!53;UBERON:0000072!1.91e-08!46;UBERON:0002090!3.24e-07!6
|ontology_enrichment_uberon_v019=UBERON:0001737;2.33e-111;9!UBERON:0001557;2.33e-111;9!UBERON:0002419;2.23e-25;2!UBERON:0007771;2.23e-25;2!UBERON:0003297;2.23e-25;2!UBERON:0001821;2.23e-25;2!UBERON:0003487;2.23e-25;2!UBERON:0001820;2.23e-25;2!UBERON:0000072;1.02e-24;37!UBERON:0000065;8.28e-21;44!UBERON:0001004;5.99e-11;65!UBERON:0001003;6.52e-08;15!UBERON:0007376;6.52e-08;15
|ontology_enrichment_uberon_v019=UBERON:0001737;2.33e-111;9!UBERON:0001557;2.33e-111;9!UBERON:0002419;2.23e-25;2!UBERON:0007771;2.23e-25;2!UBERON:0003297;2.23e-25;2!UBERON:0001821;2.23e-25;2!UBERON:0003487;2.23e-25;2!UBERON:0001820;2.23e-25;2!UBERON:0000072;1.02e-24;37!UBERON:0000065;8.28e-21;44!UBERON:0001004;5.99e-11;65!UBERON:0001003;6.52e-08;15!UBERON:0007376;6.52e-08;15
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.19e-111,9;UBERON:0001557,2.12e-52,19;UBERON:0008947,8.81e-26,38;UBERON:0003258,8.81e-26,38;UBERON:0002419,3.05e-25,2;UBERON:0007771,3.05e-25,2;UBERON:0003297,3.05e-25,2;UBERON:0001821,3.05e-25,2;UBERON:0003487,3.05e-25,2;UBERON:0001820,3.05e-25,2;UBERON:0005089,3.05e-25,2;UBERON:0005088,3.05e-25,2;UBERON:0000072,1.14e-20,47;UBERON:0000065,7.25e-18,54;UBERON:0001004,9.08e-13,74;UBERON:0001041,1.05e-10,87;UBERON:0001048,1.01e-09,160;UBERON:0001003,7.01e-08,15;UBERON:0007376,7.01e-08,15;UBERON:0007383,7.01e-08,15;UBERON:0004921,1.54e-07,118
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,4.8505788016336,3.70886318171824,4.82022059766964,4.85293480022533,4.57546832594053,4.98268300133303,6.33707148352773,5.101758093259,9.23393176671337,0,0,0,0,0,0,0,0,0,0,0.98775256867763,0,1.40740561376283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,3.25030123018261,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.86101074534246,3.36942951335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0.921482106297696,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0.977756913674015,0,0,0,0,0,0,0,0,5.1852687615695,0.407712618220842,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95952416065645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581207126840626,0,0,0.207216164163037,0.85359238546975,0,0,0.118332000730565,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,4.8505788016336,3.70886318171824,4.82022059766964,4.85293480022533,4.57546832594053,4.98268300133303,6.33707148352773,5.101758093259,9.23393176671337,0,0,0,0,0,0,0,0,0,0,0.98775256867763,0,1.40740561376283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,3.25030123018261,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.86101074534246,3.36942951335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0.921482106297696,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0.977756913674015,0,0,0,0,0,0,0,0,5.1852687615695,0.407712618220842,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95952416065645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581207126840626,0,0,0.207216164163037,0.85359238546975,0,0,0.118332000730565,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0
|short_description=p7@SPINK6
|short_description=p7@SPINK6
}}
}}

Latest revision as of 23:38, 15 September 2015

Short description:p7@SPINK6
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_7_at_SPINK6_5end
Coexpression cluster:C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy
Association with transcript: -7bp_to_ENST00000325630, uc003lpa.2_5end
EntrezGene:SPINK6
HGNC: 29486
UniProt: Q6UWN8
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
2
4
6
8
10




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr5:147582387..147582396,%2B&oldid=4019567"