FFCP PHASE1:Hg19::chr16:28304305..28304313,+: Difference between revisions
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|id=chr16:28304305..28304313,+
|short_description=p6@SBK1
|description=CAGE_peak_6_at_SBK1_5end
|association_with_transcript=465bp_to_ENST00000341901,NM_001024401,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=388228 | |EntrezGene=388228 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17699 | |HGNC=17699 | ||
|TSSclassifier=strong | |||
|UniProt=Q52WX2 | |UniProt=Q52WX2 | ||
|association_with_transcript=465bp_to_ENST00000341901,NM_001024401,uc002dpd.2_5end | |||
|cluster_id=chr16:28304305..28304313,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_6_at_SBK1_5end | |||
|id=chr16:28304305..28304313,+ | |||
|ontology_enrichment_celltype=CL:0000047!9.96e-18!8;CL:0002319!8.71e-13!25;CL:0000540!1.21e-12!6;CL:0000031!1.21e-12!6;CL:0000404!1.21e-12!6;CL:0000133!1.38e-11!59;CL:0002322!1.78e-09!5;CL:0000221!6.68e-09!71;CL:0000623!1.27e-08!3;CL:0000825!1.27e-08!3;CL:0000242!8.36e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.66e-37;6!CL:0000404;2.66e-37;6!CL:0002319;4.76e-15;25!CL:0000047;8.82e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.19e-49,8;CL:0000540,2.50e-37,6;CL:0000031,2.50e-37,6;CL:0000404,2.50e-37,6;CL:0002319,4.59e-15,25;CL:0000133,6.78e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;2.66e-37;6 | |||
|ontology_enrichment_disease=DOID:3095!3.22e-12!22;DOID:2994!3.22e-12!22;DOID:171!7.49e-12!10;DOID:5409!2.64e-10!4;DOID:169!4.71e-07!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.78e-16!94;UBERON:0001016!6.78e-16!94;UBERON:0001017!7.37e-14!82;UBERON:0001950!3.49e-13!20;UBERON:0005743!6.26e-13!86;UBERON:0000956!3.03e-12!25;UBERON:0000203!3.03e-12!25;UBERON:0002619!8.00e-12!22;UBERON:0002370!9.65e-11!4;UBERON:0005058!9.65e-11!4;UBERON:0009113!9.65e-11!4;UBERON:0003295!9.65e-11!4;UBERON:0005562!9.65e-11!4;UBERON:0000924!1.46e-10!173;UBERON:0006601!1.46e-10!173;UBERON:0001869!4.51e-09!32;UBERON:0002791!9.96e-09!33;UBERON:0004121!1.25e-08!169;UBERON:0000013!1.83e-08!5;UBERON:0002410!1.83e-08!5;UBERON:0002020!2.10e-08!34;UBERON:0003528!2.10e-08!34;UBERON:0001893!2.10e-08!34;UBERON:0001049!5.86e-08!57;UBERON:0005068!5.86e-08!57;UBERON:0006241!5.86e-08!57;UBERON:0007135!5.86e-08!57;UBERON:0002780!7.66e-08!41;UBERON:0001890!7.66e-08!41;UBERON:0006240!7.66e-08!41;UBERON:0000955!9.75e-08!69;UBERON:0006238!9.75e-08!69;UBERON:0003080!1.36e-07!42;UBERON:0002616!1.43e-07!59;UBERON:0003351!3.66e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002114;1.24e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.14e-11,81;UBERON:0001016,8.14e-10,89;UBERON:0002114,1.30e-09,2 | |||
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| ||
|short_description=p6@SBK1 | |||
}} | }} |
Latest revision as of 23:44, 15 September 2015
Short description: | p6@SBK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SBK1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 465bp_to_ENST00000341901, NM_001024401, uc002dpd.2_5end |
EntrezGene: | SBK1 |
HGNC: | 17699 |
UniProt: | Q52WX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.19e-49 | 8 |
neuron | 2.50e-37 | 6 |
neuroblast | 2.50e-37 | 6 |
electrically signaling cell | 2.50e-37 | 6 |
neural cell | 4.59e-15 | 25 |
neurectodermal cell | 6.78e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.14e-11 | 81 |
nervous system | 8.14e-10 | 89 |
duodenum | 1.30e-09 | 2 |