FFCP PHASE1:Hg19::chr5:147648393..147648403,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=153218 | |EntrezGene=153218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27200 | |HGNC=27200 | ||
|TSSclassifier=strong | |||
|UniProt=Q1W4C9 | |UniProt=Q1W4C9 | ||
|association_with_transcript=-19bp_to_ENST00000398450,ENST00000511106,NM_001040129_5end | |association_with_transcript=-19bp_to_ENST00000398450,ENST00000511106,NM_001040129_5end | ||
|cluster_id=chr5:147648393..147648403,+ | |||
|coexpression_cluster_id=C106 | |coexpression_cluster_id=C106 | ||
|description=CAGE_peak_3_at_SPINK13_5end | |description=CAGE_peak_3_at_SPINK13_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002623!1.18e-07!3;CL:0002573!2.27e-07!2;CL:0002603!2.67e-07!3 | |ontology_enrichment_celltype=CL:0002623!1.18e-07!3;CL:0002573!2.27e-07!2;CL:0002603!2.67e-07!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.01e-36;29!UBERON:0007297;5.74e-08;2 | |ontology_enrichment_development_v019=UBERON:0008947;2.01e-36;29!UBERON:0007297;5.74e-08;2 | ||
|ontology_enrichment_disease=DOID:0060084!1.49e-07!3;DOID:127!1.49e-07!3;DOID:305!1.69e-07!106 | |ontology_enrichment_disease=DOID:0060084!1.49e-07!3;DOID:127!1.49e-07!3;DOID:305!1.69e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,5.62e-14,106;DOID:0050687,5.06e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.07e-46!9;UBERON:0001557!5.53e-21!19;UBERON:0006947!4.93e-16!3;UBERON:0004054!4.93e-16!3;UBERON:0005904!3.77e-12!4;UBERON:0008947!8.51e-12!38;UBERON:0003258!8.51e-12!38;UBERON:0000007!7.45e-11!2;UBERON:0000072!2.06e-09!46;UBERON:0004175!5.51e-09!25;UBERON:0000065!6.38e-08!53;UBERON:0001004!7.54e-08!72;UBERON:0003135!1.40e-07!11;UBERON:0003101!1.43e-07!22;UBERON:0000079!1.43e-07!22;UBERON:0000077!2.41e-07!130;UBERON:0004921!2.41e-07!129;UBERON:0004185!2.41e-07!129;UBERON:0001041!3.73e-07!98 | |ontology_enrichment_uberon=UBERON:0001737!4.07e-46!9;UBERON:0001557!5.53e-21!19;UBERON:0006947!4.93e-16!3;UBERON:0004054!4.93e-16!3;UBERON:0005904!3.77e-12!4;UBERON:0008947!8.51e-12!38;UBERON:0003258!8.51e-12!38;UBERON:0000007!7.45e-11!2;UBERON:0000072!2.06e-09!46;UBERON:0004175!5.51e-09!25;UBERON:0000065!6.38e-08!53;UBERON:0001004!7.54e-08!72;UBERON:0003135!1.40e-07!11;UBERON:0003101!1.43e-07!22;UBERON:0000079!1.43e-07!22;UBERON:0000077!2.41e-07!130;UBERON:0004921!2.41e-07!129;UBERON:0004185!2.41e-07!129;UBERON:0001041!3.73e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.01e-119;9!UBERON:0001557;8.01e-119;9!UBERON:0000072;1.94e-26;37!UBERON:0000065;2.84e-22;44!UBERON:0006947;1.48e-18;3!UBERON:0004054;1.48e-18;3!UBERON:0001301;1.23e-14;1!UBERON:0001000;1.84e-14;1!UBERON:0005352;1.84e-14;1!UBERON:0005904;3.61e-14;4!UBERON:0001004;1.07e-11;65!UBERON:0000007;8.89e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0001737;8.01e-119;9!UBERON:0001557;8.01e-119;9!UBERON:0000072;1.94e-26;37!UBERON:0000065;2.84e-22;44!UBERON:0006947;1.48e-18;3!UBERON:0004054;1.48e-18;3!UBERON:0001301;1.23e-14;1!UBERON:0001000;1.84e-14;1!UBERON:0005352;1.84e-14;1!UBERON:0005904;3.61e-14;4!UBERON:0001004;1.07e-11;65!UBERON:0000007;8.89e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.01e-119,9;UBERON:0001557,5.72e-56,19;UBERON:0008947,1.31e-27,38;UBERON:0003258,1.31e-27,38;UBERON:0000072,3.67e-22,47;UBERON:0000065,3.55e-19,54;UBERON:0006947,1.48e-18,3;UBERON:0004054,1.48e-18,3;UBERON:0001301,1.23e-14,1;UBERON:0001000,1.84e-14,1;UBERON:0005352,1.84e-14,1;UBERON:0005904,3.61e-14,4;UBERON:0001004,9.59e-14,74;UBERON:0001041,1.51e-11,87;UBERON:0004921,3.60e-08,118;UBERON:0000007,8.60e-08,2 | |||
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|short_description=p3@SPINK13 | |short_description=p3@SPINK13 | ||
}} | }} |
Latest revision as of 23:58, 15 September 2015
Short description: | p3@SPINK13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPINK13_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -19bp_to_ENST00000398450, ENST00000511106, NM_001040129_5end |
EntrezGene: | SPINK13 |
HGNC: | 27200 |
UniProt: | Q1W4C9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 8.01e-119 | 9 |
upper respiratory tract | 5.72e-56 | 19 |
respiratory primordium | 1.31e-27 | 38 |
endoderm of foregut | 1.31e-27 | 38 |
segment of respiratory tract | 3.67e-22 | 47 |
respiratory tract | 3.55e-19 | 54 |
male genital duct | 1.48e-18 | 3 |
internal male genitalia | 1.48e-18 | 3 |
epididymis | 1.23e-14 | 1 |
vas deferens | 1.84e-14 | 1 |
spermatic cord | 1.84e-14 | 1 |
duct of male reproductive system | 3.61e-14 | 4 |
respiratory system | 9.59e-14 | 74 |
foregut | 1.51e-11 | 87 |
subdivision of digestive tract | 3.60e-08 | 118 |
pituitary gland | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.62e-14 | 106 |
cell type cancer | 5.06e-10 | 143 |