FFCP PHASE1:Hg19::chr10:104184955..104184965,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79004 | |EntrezGene=79004 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28352 | |HGNC=28352 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H467 | |UniProt=Q9H467 | ||
|association_with_transcript=-10bp_to_AB025425,AB232358_5end | |association_with_transcript=-10bp_to_AB025425,AB232358_5end | ||
|cluster_id=chr10:104184955..104184965,- | |||
|coexpression_cluster_id=C291 | |||
|description=CAGE_peak_4_at_CUEDC2_5end | |description=CAGE_peak_4_at_CUEDC2_5end | ||
|id=chr10:104184955..104184965,- | |id=chr10:104184955..104184965,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.09e-23;1!UBERON:0006241;8.31e-09;3!UBERON:0003057;8.31e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.04e-15!57;UBERON:0005068!1.04e-15!57;UBERON:0006241!1.04e-15!57;UBERON:0007135!1.04e-15!57;UBERON:0007023!8.14e-14!115;UBERON:0002616!3.58e-13!59;UBERON:0003075!1.77e-11!86;UBERON:0007284!1.77e-11!86;UBERON:0001896!3.78e-11!3;UBERON:0005290!3.78e-11!3;UBERON:0010096!3.78e-11!3;UBERON:0002346!9.39e-11!90;UBERON:0002298!1.05e-10!8;UBERON:0000955!1.78e-10!69;UBERON:0006238!1.78e-10!69;UBERON:0003076!2.61e-10!15;UBERON:0003057!2.61e-10!15;UBERON:0005743!5.07e-10!86;UBERON:0000073!8.97e-10!94;UBERON:0001016!8.97e-10!94;UBERON:0004733!1.39e-09!12;UBERON:0002028!1.39e-09!12;UBERON:0007277!1.39e-09!12;UBERON:0001017!1.90e-09!82;UBERON:0002791!2.89e-09!33;UBERON:0001893!6.14e-09!34;UBERON:0002020!6.19e-09!34;UBERON:0003528!6.19e-09!34;UBERON:0004732!8.56e-09!13;UBERON:0002780!1.80e-08!41;UBERON:0001890!1.80e-08!41;UBERON:0006240!1.80e-08!41;UBERON:0003127!2.78e-08!2;UBERON:0003080!3.23e-08!42;UBERON:0000153!1.23e-07!129;UBERON:0007811!1.23e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;4.10e-23;1!UBERON:0009661;4.10e-23;1!UBERON:0002950;4.10e-23;1!UBERON:0001891;4.10e-23;1!UBERON:0003127;2.90e-12;2!UBERON:0000341;2.90e-12;2!UBERON:0000922;3.85e-09;49!UBERON:0002240;8.31e-09;3!UBERON:0005174;8.31e-09;3!UBERON:0001137;8.31e-09;3!UBERON:0001723;8.96e-09;3!UBERON:0001033;8.96e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,4.10e-23,1;UBERON:0009661,4.10e-23,1;UBERON:0002950,4.10e-23,1;UBERON:0001891,4.10e-23,1;UBERON:0009616,4.10e-23,1;UBERON:0010286,4.10e-23,1;UBERON:0003127,2.32e-12,2;UBERON:0000341,2.59e-12,2;UBERON:0002240,8.31e-09,3;UBERON:0005174,8.31e-09,3;UBERON:0001137,8.31e-09,3;UBERON:0001723,8.96e-09,3;UBERON:0001033,8.96e-09,3;UBERON:0010056,8.96e-09,3 | |||
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| ||
|short_description=p4@CUEDC2 | |short_description=p4@CUEDC2 | ||
}} | }} |
Latest revision as of 01:20, 16 September 2015
Short description: | p4@CUEDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CUEDC2_5end |
Coexpression cluster: | C291_spinal_substantia_retina_medulla_tongue_skeletal_trachea |
Association with transcript: | -10bp_to_AB025425, AB232358_5end |
EntrezGene: | CUEDC2 |
HGNC: | 28352 |
UniProt: | Q9H467 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
substantia nigra | 4.10e-23 | 1 |
midbrain nucleus | 4.10e-23 | 1 |
regional part of midbrain | 4.10e-23 | 1 |
midbrain | 4.10e-23 | 1 |
presumptive midbrain | 4.10e-23 | 1 |
midbrain neural tube | 4.10e-23 | 1 |
open tracheal system trachea | 2.32e-12 | 2 |
throat | 2.59e-12 | 2 |
spinal cord | 8.31e-09 | 3 |
dorsal region element | 8.31e-09 | 3 |
dorsum | 8.31e-09 | 3 |
tongue | 8.96e-09 | 3 |
gustatory system | 8.96e-09 | 3 |
future tongue | 8.96e-09 | 3 |