FFCP PHASE1:Hg19::chr10:104417630..104417634,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81603 | |EntrezGene=81603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=15579 | |HGNC=15579 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-67bp_to_AF086326_5end | |association_with_transcript=-67bp_to_AF086326_5end | ||
|cluster_id=chr10:104417630..104417634,+ | |||
|coexpression_cluster_id=C204 | |coexpression_cluster_id=C204 | ||
|description=CAGE_peak_24_at_TRIM8_5end | |description=CAGE_peak_24_at_TRIM8_5end | ||
|id=chr10:104417630..104417634,+ | |id=chr10:104417630..104417634,+ | ||
|ontology_enrichment_celltype=CL:0000307;2.74e-12;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000307;2.74e-12;3 | ||
|ontology_enrichment_disease=DOID:3347;5.97e-34;1!DOID:201;8.72e-07;6!DOID:0060100;8.72e-07;6 | |ontology_enrichment_celltype_v019_2=CL:0000068,2.89e-12,3;CL:0000069,2.89e-12,3;CL:0000307,2.89e-12,3;CL:0000377,2.89e-12,3 | ||
|ontology_enrichment_uberon=UBERON:0002134;2.58e-34;1!UBERON:0005208;2.58e-34;1!UBERON:0004145;2.58e-34;1!UBERON:0005946;2.58e-34;1!UBERON:0005965;2.58e-34;1!UBERON:0002078;2.58e-34;1!UBERON:0002081;6.48e-18;2!UBERON:0002133;6.48e-18;2!UBERON:0003978;2.07e-12;3!UBERON:0004151;2.07e-12;3!UBERON:0000946;2.07e-12;3 | |ontology_enrichment_development_v019=CL:0000377;2.74e-12;3!UBERON:0005062;1.22e-09;4!UBERON:0007284;1.22e-09;4 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;5.97e-34;1!DOID:201;8.72e-07;6!DOID:0060100;8.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,3.61e-34,1;DOID:201,8.02e-07,6;DOID:0060100,8.02e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.58e-34;1!UBERON:0005208;2.58e-34;1!UBERON:0004145;2.58e-34;1!UBERON:0005946;2.58e-34;1!UBERON:0005965;2.58e-34;1!UBERON:0002078;2.58e-34;1!UBERON:0002081;6.48e-18;2!UBERON:0002133;6.48e-18;2!UBERON:0003978;2.07e-12;3!UBERON:0004151;2.07e-12;3!UBERON:0000946;2.07e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.58e-34,1;UBERON:0005208,2.58e-34,1;UBERON:0005946,2.58e-34,1;UBERON:0005965,2.58e-34,1;UBERON:0002078,2.58e-34,1;UBERON:0002081,6.48e-18,2;UBERON:0002133,6.48e-18,2;UBERON:0010227,6.48e-18,2;UBERON:0003978,2.07e-12,3;UBERON:0009751,2.07e-12,3;UBERON:0004151,2.07e-12,3;UBERON:0000946,2.07e-12,3;UBERON:0002523,2.07e-12,3;UBERON:0005983,2.07e-12,3;UBERON:0004145,2.07e-12,3;UBERON:0002165,2.07e-12,3;UBERON:0002062,2.07e-12,3;UBERON:0007280,2.07e-12,3 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0.730310090387373,0.975865597581014,0,0.204000691244253,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0.802177789880567,0.217010870715852,0.671746422719773,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0,0.22465726229299,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0.722878304769133,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0.370784442784429,0.324547393654683,0.174129737299267,0,0,0,0.371457501329565,0.198762407366705,0.860234595106124,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.735326160691737,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.379891534993739,0,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0.368502951935304,0,0,0,0,0.718618141816238,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0.194874010322397,0,0,0.646584227275248,0,0.201504196455281,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0.630809660135739,0.117141414992713,0,0,0,0,0,0,0.391602314925481,0,0.413536052245775,0.215714200818617,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0.154209693802656,0,0.164254312027618,0,0.232420756919918,0,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0.510281115829547,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,11.0892088863392,0,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0.987884678879706,0,0.349934720244983,0,0,1.08890984861323,0,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0.213648142254946,0,0.245040215981032,0,0,0.0711418433484141,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.562677665642051,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0.311039587661807,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0.23056390438806,0,0,0,0.274792780205587,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0.123563938946503,0.104421949505455,0,0,0.234264445725339,0,0.19566461893209,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.343972064943233,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0.235694034616795,0.271808412147228,0.104602846312333,0,0.288950589901519,0,0.410716136675979,0,0,0,0.558564802544508,0,2.87149209830726,0,0,0.669514372325618,0,0,1.16495949527454,0,0,0.0674035438541849,0.0984274815147488,0,0,0.408610218334727,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0.146552233678082,0,0.517131825446202,0,0,0,0.213574825135389,0.157204305099666,0.828478110694391,0,0,0,0,1.08803560673895,0.2506898940227,0.612691153526923,0.327872630709804,0,0,0.244052529803926,0.250381861413,0,0.221858103073705,0.18628920882415,0,0.124980407962107,0,0,0,0,0,0,0,0.554805861502613,0.189403005275089,0,0,0.228840068396924,0.453692771289717,0.310874401165561,0.443565449968902,0.477890301491107,0,0.310525913752519,0,0.265841714557995,0,0.300515217994437,0,0,0.363697318405119,0.429642228169954,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0.845248493434508,0,0,0.344429959321631,0,0.184105950251841,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.638535436228605,0.41023272848151,0,0,0.161475645631851,0,0,0,0.183428598521679,0.115525666150338,0,1.3807198521202,0.198916222116275,0.0752103283492573,0,0,0.261906694481422,0.163771917510097,0.147856086217045,0,0,0,0,0.546974809018219,0,0.49621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| ||
|short_description=p24@TRIM8 | |short_description=p24@TRIM8 | ||
}} | }} |
Latest revision as of 01:59, 16 September 2015
Short description: | p24@TRIM8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_TRIM8_5end |
Coexpression cluster: | C204_Smooth_nasal_CD4_CD19_CD8_CD14_CD34 |
Association with transcript: | -67bp_to_AF086326_5end |
EntrezGene: | TRIM8 |
HGNC: | 15579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.89e-12 | 3 |
branched duct epithelial cell | 2.89e-12 | 3 |
tracheal epithelial cell | 2.89e-12 | 3 |
tracheoblast | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.58e-34 | 1 |
right atrium valve | 2.58e-34 | 1 |
outflow tract of atrium | 2.58e-34 | 1 |
outflow part of right atrium | 2.58e-34 | 1 |
right cardiac atrium | 2.58e-34 | 1 |
cardiac atrium | 6.48e-18 | 2 |
atrioventricular valve | 6.48e-18 | 2 |
future cardiac atrium | 6.48e-18 | 2 |
valve | 2.07e-12 | 3 |
cardiac mesenchyme | 2.07e-12 | 3 |
cardiac chamber | 2.07e-12 | 3 |
cardial valve | 2.07e-12 | 3 |
tunica intima | 2.07e-12 | 3 |
heart layer | 2.07e-12 | 3 |
outflow tract | 2.07e-12 | 3 |
endocardium | 2.07e-12 | 3 |
endocardial cushion | 2.07e-12 | 3 |
presumptive endocardium | 2.07e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 3.61e-34 | 1 |
connective tissue cancer | 8.02e-07 | 6 |
musculoskeletal system cancer | 8.02e-07 | 6 |