FFCP PHASE1:Hg19::chr10:104417630..104417634,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81603 | |EntrezGene=81603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=15579 | |HGNC=15579 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-67bp_to_AF086326_5end | |association_with_transcript=-67bp_to_AF086326_5end | ||
|cluster_id=chr10:104417630..104417634,+ | |||
|coexpression_cluster_id=C204 | |||
|description=CAGE_peak_24_at_TRIM8_5end | |description=CAGE_peak_24_at_TRIM8_5end | ||
|id=chr10:104417630..104417634,+ | |id=chr10:104417630..104417634,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000307;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.89e-12,3;CL:0000069,2.89e-12,3;CL:0000307,2.89e-12,3;CL:0000377,2.89e-12,3 | |||
|ontology_enrichment_development_v019=CL:0000377;2.74e-12;3!UBERON:0005062;1.22e-09;4!UBERON:0007284;1.22e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;5.97e-34;1!DOID:201;8.72e-07;6!DOID:0060100;8.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,3.61e-34,1;DOID:201,8.02e-07,6;DOID:0060100,8.02e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.58e-34;1!UBERON:0005208;2.58e-34;1!UBERON:0004145;2.58e-34;1!UBERON:0005946;2.58e-34;1!UBERON:0005965;2.58e-34;1!UBERON:0002078;2.58e-34;1!UBERON:0002081;6.48e-18;2!UBERON:0002133;6.48e-18;2!UBERON:0003978;2.07e-12;3!UBERON:0004151;2.07e-12;3!UBERON:0000946;2.07e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.58e-34,1;UBERON:0005208,2.58e-34,1;UBERON:0005946,2.58e-34,1;UBERON:0005965,2.58e-34,1;UBERON:0002078,2.58e-34,1;UBERON:0002081,6.48e-18,2;UBERON:0002133,6.48e-18,2;UBERON:0010227,6.48e-18,2;UBERON:0003978,2.07e-12,3;UBERON:0009751,2.07e-12,3;UBERON:0004151,2.07e-12,3;UBERON:0000946,2.07e-12,3;UBERON:0002523,2.07e-12,3;UBERON:0005983,2.07e-12,3;UBERON:0004145,2.07e-12,3;UBERON:0002165,2.07e-12,3;UBERON:0002062,2.07e-12,3;UBERON:0007280,2.07e-12,3 | |||
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| ||
|short_description=p24@TRIM8 | |short_description=p24@TRIM8 | ||
}} | }} |
Latest revision as of 01:59, 16 September 2015
Short description: | p24@TRIM8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_TRIM8_5end |
Coexpression cluster: | C204_Smooth_nasal_CD4_CD19_CD8_CD14_CD34 |
Association with transcript: | -67bp_to_AF086326_5end |
EntrezGene: | TRIM8 |
HGNC: | 15579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.89e-12 | 3 |
branched duct epithelial cell | 2.89e-12 | 3 |
tracheal epithelial cell | 2.89e-12 | 3 |
tracheoblast | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.58e-34 | 1 |
right atrium valve | 2.58e-34 | 1 |
outflow tract of atrium | 2.58e-34 | 1 |
outflow part of right atrium | 2.58e-34 | 1 |
right cardiac atrium | 2.58e-34 | 1 |
cardiac atrium | 6.48e-18 | 2 |
atrioventricular valve | 6.48e-18 | 2 |
future cardiac atrium | 6.48e-18 | 2 |
valve | 2.07e-12 | 3 |
cardiac mesenchyme | 2.07e-12 | 3 |
cardiac chamber | 2.07e-12 | 3 |
cardial valve | 2.07e-12 | 3 |
tunica intima | 2.07e-12 | 3 |
heart layer | 2.07e-12 | 3 |
outflow tract | 2.07e-12 | 3 |
endocardium | 2.07e-12 | 3 |
endocardial cushion | 2.07e-12 | 3 |
presumptive endocardium | 2.07e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 3.61e-34 | 1 |
connective tissue cancer | 8.02e-07 | 6 |
musculoskeletal system cancer | 8.02e-07 | 6 |