FFCP PHASE1:Hg19::chr17:48611955..48611976,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:48611955..48611976,+
|short_description=p2@EPN3
|description=CAGE_peak_2_at_EPN3_5end
|association_with_transcript=36bp_to_ENST00000507467_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55040 | |EntrezGene=55040 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18235 | |HGNC=18235 | ||
|TSSclassifier=strong | |||
|UniProt=D6RFG3 | |UniProt=D6RFG3 | ||
|association_with_transcript=36bp_to_ENST00000507467_5end | |||
|cluster_id=chr17:48611955..48611976,+ | |||
|coexpression_cluster_id=C1217 | |||
|description=CAGE_peak_2_at_EPN3_5end | |||
|id=chr17:48611955..48611976,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.65e-20!43;CL:0000066!1.02e-18!254;CL:0002368!2.09e-13!13;CL:0000223!5.69e-12!59;CL:0002159!4.02e-10!13;CL:0002251!1.10e-09!21;CL:0002202!6.42e-09!9;CL:0002632!6.42e-09!9;CL:0000076!2.57e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.98e-20;13!CL:0002159;1.88e-19;14!CL:0002076;7.02e-17;42!CL:0002202;2.04e-11;9!CL:0002632;2.04e-11;9!CL:0002621;7.75e-10;3!CL:0002166;9.19e-10;3!CL:0000307;1.00e-09;3!CL:0002328;1.53e-09;3!CL:0002577;2.15e-08;3!CL:0002077;2.36e-08;34!CL:0000240;2.94e-08;6!CL:0000311;2.94e-08;6!CL:0000079;2.94e-08;6!CL:0000237;2.94e-08;6!CL:0000362;3.02e-08;9!CL:0002251;8.86e-08;20!CL:0002327;2.22e-07;4!CL:0000317;6.29e-07;2!CL:1000448;6.29e-07;2!CL:0002308;6.29e-07;2!CL:0002140;6.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.94e-22,253;CL:0002076,1.13e-21,42;CL:0002368,2.28e-20,13;CL:0002159,1.86e-19,14;CL:0000223,3.53e-14,58;CL:0002202,2.01e-11,9;CL:0002632,2.01e-11,9;CL:0002621,7.88e-10,3;CL:0002166,8.83e-10,3;CL:0000068,1.02e-09,3;CL:0000069,1.02e-09,3;CL:0000307,1.02e-09,3;CL:0000377,1.02e-09,3;CL:0002328,1.47e-09,3;CL:0002077,1.60e-09,34;CL:0002577,1.84e-08,3;CL:0000240,2.87e-08,6;CL:0000311,2.87e-08,6;CL:0000079,2.87e-08,6;CL:0000237,2.87e-08,6;CL:0000036,2.87e-08,6;CL:0000357,2.87e-08,6;CL:0000114,2.87e-08,6;CL:0000362,3.02e-08,9;CL:0002251,9.01e-08,20;CL:0002327,2.18e-07,4;CL:0000076,3.92e-07,63;CL:0000317,6.30e-07,2;CL:1000448,6.30e-07,2;CL:0002308,6.30e-07,2;CL:0002140,6.30e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;1.00e-09;3!CL:0000223;1.79e-08;58!CL:0000357;2.94e-08;6!CL:0000114;2.94e-08;6 | |||
|ontology_enrichment_disease=DOID:1749!5.86e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.67e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.96e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.46e-12!169;UBERON:0000925!3.46e-12!169;UBERON:0006595!3.46e-12!169;UBERON:0000064!7.11e-12!219;UBERON:0000062!1.95e-11!511;UBERON:0007023!7.05e-10!115;UBERON:0000161!6.01e-09!35;UBERON:0005631!2.86e-08!14;UBERON:0000158!2.86e-08!14;UBERON:0000467!3.36e-08!625;UBERON:0003100!3.42e-08!41;UBERON:0001004!3.90e-08!72;UBERON:0000480!4.01e-08!626;UBERON:0001008!6.83e-08!45;UBERON:0000922!8.14e-08!612;UBERON:0007196!1.05e-07!14;UBERON:0001558!1.05e-07!14;UBERON:0000468!1.23e-07!659;UBERON:0006554!2.40e-07!44;UBERON:0002050!2.63e-07!605;UBERON:0005423!2.63e-07!605;UBERON:0001007!4.30e-07!155;UBERON:0001555!4.30e-07!155;UBERON:0007026!4.30e-07!155;UBERON:0000923!5.13e-07!604;UBERON:0005291!5.13e-07!604;UBERON:0006598!5.13e-07!604;UBERON:0002532!5.13e-07!604;UBERON:0000344!9.90e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;2.82e-10;12!UBERON:0001949;7.75e-10;3!UBERON:0004815;1.53e-09;3!UBERON:0002031;1.53e-09;3!UBERON:0000365;2.77e-08;5!UBERON:0000165;6.41e-08;28!UBERON:0000344;1.24e-07;20!UBERON:0001708;2.15e-07;4!UBERON:0008895;2.15e-07;4!UBERON:0001911;2.22e-07;4!UBERON:0003729;2.44e-07;13!UBERON:0002419;6.29e-07;2!UBERON:0007771;6.29e-07;2!UBERON:0003297;6.29e-07;2!UBERON:0001821;6.29e-07;2!UBERON:0003487;6.29e-07;2!UBERON:0001820;6.29e-07;2!UBERON:0005910;6.60e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.83e-12,99;UBERON:0004119,2.98e-11,160;UBERON:0000925,2.98e-11,160;UBERON:0006595,2.98e-11,160;UBERON:0001004,7.01e-10,74;UBERON:0001949,7.88e-10,3;UBERON:0004815,1.47e-09,3;UBERON:0002031,1.47e-09,3;UBERON:0000166,1.49e-08,22;UBERON:0000365,2.03e-08,5;UBERON:0000161,3.71e-08,36;UBERON:0005631,6.40e-08,14;UBERON:0000158,6.40e-08,14;UBERON:0000033,1.20e-07,56;UBERON:0000153,1.28e-07,62;UBERON:0007811,1.28e-07,62;UBERON:0000344,1.29e-07,20;UBERON:0000165,1.49e-07,29;UBERON:0000930,1.49e-07,29;UBERON:0001708,2.09e-07,4;UBERON:0008895,2.09e-07,4;UBERON:0001911,2.18e-07,4;UBERON:0005333,2.18e-07,4;UBERON:0008425,2.18e-07,4;UBERON:0005311,2.18e-07,4;UBERON:0003729,2.54e-07,13;UBERON:0005910,5.11e-07,6;UBERON:0002419,6.30e-07,2;UBERON:0007771,6.30e-07,2;UBERON:0003297,6.30e-07,2;UBERON:0001821,6.30e-07,2;UBERON:0003487,6.30e-07,2;UBERON:0001820,6.30e-07,2;UBERON:0005089,6.30e-07,2;UBERON:0005088,6.30e-07,2;UBERON:0000065,8.10e-07,54 | |||
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| ||
|short_description=p2@EPN3 | |||
}} | }} |
Latest revision as of 03:04, 16 September 2015
Short description: | p2@EPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EPN3_5end |
Coexpression cluster: | C1217_Mammary_Keratinocyte_Mallassezderived_Bronchial_Tracheal_Gingival_Sebocyte |
Association with transcript: | 36bp_to_ENST00000507467_5end |
EntrezGene: | EPN3 |
HGNC: | 18235 |
UniProt: | D6RFG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 4.83e-12 | 99 |
endoderm-derived structure | 2.98e-11 | 160 |
endoderm | 2.98e-11 | 160 |
presumptive endoderm | 2.98e-11 | 160 |
respiratory system | 7.01e-10 | 74 |
gingival epithelium | 7.88e-10 | 3 |
lower respiratory tract epithelium | 1.47e-09 | 3 |
epithelium of bronchus | 1.47e-09 | 3 |
oral opening | 1.49e-08 | 22 |
urothelium | 2.03e-08 | 5 |
orifice | 3.71e-08 | 36 |
extraembryonic membrane | 6.40e-08 | 14 |
membranous layer | 6.40e-08 | 14 |
head | 1.20e-07 | 56 |
anterior region of body | 1.28e-07 | 62 |
craniocervical region | 1.28e-07 | 62 |
mucosa | 1.29e-07 | 20 |
mouth | 1.49e-07 | 29 |
stomodeum | 1.49e-07 | 29 |
jaw skeleton | 2.09e-07 | 4 |
splanchnocranium | 2.09e-07 | 4 |
mammary gland | 2.18e-07 | 4 |
mammary bud | 2.18e-07 | 4 |
mammary ridge | 2.18e-07 | 4 |
mammary placode | 2.18e-07 | 4 |
mouth mucosa | 2.54e-07 | 13 |
transitional epithelium | 5.11e-07 | 6 |
skin gland | 6.30e-07 | 2 |
epidermis gland | 6.30e-07 | 2 |
gland of integumental system | 6.30e-07 | 2 |
sebaceous gland | 6.30e-07 | 2 |
skin sebaceous gland | 6.30e-07 | 2 |
sweat gland | 6.30e-07 | 2 |
sweat gland placode | 6.30e-07 | 2 |
sebaceous gland placode | 6.30e-07 | 2 |
respiratory tract | 8.10e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.96e-08 | 14 |