FFCP PHASE1:Hg19::chr6:150219214..150219224,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=135250 | |EntrezGene=135250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16793 | |HGNC=16793 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000524905_5end | |association_with_transcript=-1bp_to_ENST00000524905_5end | ||
|cluster_id=chr6:150219214..150219224,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_8_at_RAET1E_5end | |description=CAGE_peak_8_at_RAET1E_5end | ||
|id=chr6:150219214..150219224,- | |id=chr6:150219214..150219224,- | ||
|ontology_enrichment_celltype=CL:0002623!6.66e-21!3;CL:0000622!9.02e-13!5;CL:0000154!9.97e-11!6;CL:0000150!2.64e-07!9 | |ontology_enrichment_celltype=CL:0002623!6.66e-21!3;CL:0000622!9.02e-13!5;CL:0000154!9.97e-11!6;CL:0000150!2.64e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0001014;2.74e-12;2!CL:0000575;2.74e-12;2!CL:0001016;2.74e-12;2!CL:0002623;1.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.07e-12,2;CL:0001016,2.07e-12,2;CL:0000575,2.32e-12,2;CL:0002623,1.30e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.19e-23;1!UBERON:0008814;1.85e-12;2!UBERON:0010056;1.85e-12;2 | |||
|ontology_enrichment_disease=DOID:3451!2.89e-14!2;DOID:4159!2.89e-14!2;DOID:0060122!2.89e-14!2;DOID:3151!5.40e-08!1;DOID:3149!5.40e-08!1;DOID:2513!5.79e-08!1 | |ontology_enrichment_disease=DOID:3451!2.89e-14!2;DOID:4159!2.89e-14!2;DOID:0060122!2.89e-14!2;DOID:3151!5.40e-08!1;DOID:3149!5.40e-08!1;DOID:2513!5.79e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000078!2.72e-13!18;UBERON:0000166!2.57e-11!21;UBERON:0003102!4.80e-11!95;UBERON:0001044!9.97e-11!6;UBERON:0003293!9.97e-11!6;UBERON:0003294!9.97e-11!6;UBERON:0010047!9.97e-11!6;UBERON:0000167!9.97e-11!6;UBERON:0001723!2.65e-10!3;UBERON:0001033!2.65e-10!3;UBERON:0010056!2.65e-10!3;UBERON:0000161!1.07e-08!35;UBERON:0002372!1.77e-08!1;UBERON:0001961!1.77e-08!1;UBERON:0001744!1.77e-08!1;UBERON:0001735!1.77e-08!1;UBERON:0000165!2.39e-08!28;UBERON:0000930!2.39e-08!28;UBERON:0000997!2.71e-08!1;UBERON:0005056!2.71e-08!1;UBERON:0001004!1.17e-07!72;UBERON:0000014!1.44e-07!4;UBERON:0001042!7.46e-07!10;UBERON:0009145!7.46e-07!10 | |ontology_enrichment_uberon=UBERON:0000078!2.72e-13!18;UBERON:0000166!2.57e-11!21;UBERON:0003102!4.80e-11!95;UBERON:0001044!9.97e-11!6;UBERON:0003293!9.97e-11!6;UBERON:0003294!9.97e-11!6;UBERON:0010047!9.97e-11!6;UBERON:0000167!9.97e-11!6;UBERON:0001723!2.65e-10!3;UBERON:0001033!2.65e-10!3;UBERON:0010056!2.65e-10!3;UBERON:0000161!1.07e-08!35;UBERON:0002372!1.77e-08!1;UBERON:0001961!1.77e-08!1;UBERON:0001744!1.77e-08!1;UBERON:0001735!1.77e-08!1;UBERON:0000165!2.39e-08!28;UBERON:0000930!2.39e-08!28;UBERON:0000997!2.71e-08!1;UBERON:0005056!2.71e-08!1;UBERON:0001004!1.17e-07!72;UBERON:0000014!1.44e-07!4;UBERON:0001042!7.46e-07!10;UBERON:0009145!7.46e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.87e-30;3!UBERON:0001033;2.87e-30;3!UBERON:0002372;1.19e-23;1!UBERON:0001961;1.19e-23;1!UBERON:0001744;1.19e-23;1!UBERON:0001042;1.19e-23;1!UBERON:0001735;1.19e-23;1!UBERON:0000997;3.67e-23;1!UBERON:0005056;3.67e-23;1!UBERON:0004176;3.67e-23;1!UBERON:0000165;4.88e-13;28!UBERON:0006562;1.56e-12;2!UBERON:0000341;2.74e-12;2!UBERON:0000020;2.78e-09;23!UBERON:0001032;6.39e-09;24!UBERON:0004456;6.39e-09;24!UBERON:0001043;8.63e-09;3!UBERON:0007811;1.13e-08;52!UBERON:0000153;1.14e-08;54!UBERON:0000033;2.66e-07;50!UBERON:0001041;2.77e-07;14!UBERON:0000964;8.85e-07;4!UBERON:0010409;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.17e-30,3;UBERON:0001033,4.17e-30,3;UBERON:0010056,4.17e-30,3;UBERON:0002372,1.34e-23,1;UBERON:0001961,1.34e-23,1;UBERON:0001744,1.34e-23,1;UBERON:0001735,1.34e-23,1;UBERON:0000997,5.13e-23,1;UBERON:0005056,5.13e-23,1;UBERON:0001042,1.67e-20,10;UBERON:0009145,1.67e-20,10;UBERON:0006562,1.04e-18,11;UBERON:0000166,2.08e-16,22;UBERON:0000153,8.63e-13,62;UBERON:0007811,8.63e-13,62;UBERON:0000165,1.48e-12,29;UBERON:0000930,1.48e-12,29;UBERON:0000341,2.59e-12,2;UBERON:0001444,2.01e-11,49;UBERON:0001557,3.93e-11,19;UBERON:0000161,3.42e-10,36;UBERON:0000033,5.14e-10,56;UBERON:0000020,6.57e-09,24;UBERON:0001032,6.57e-09,24;UBERON:0004456,6.57e-09,24;UBERON:0001043,8.31e-09,3;UBERON:0009143,8.31e-09,3;UBERON:0000964,8.14e-07,4;UBERON:0010409,8.14e-07,4;UBERON:0004348,8.14e-07,4;UBERON:0005427,8.14e-07,4 | |||
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|short_description=p8@RAET1E | |short_description=p8@RAET1E | ||
}} | }} |
Latest revision as of 03:08, 16 September 2015
Short description: | p8@RAET1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RAET1E_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -1bp_to_ENST00000524905_5end |
EntrezGene: | RAET1E |
HGNC: | 16793 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.07e-12 | 2 |
immature CD1a-positive Langerhans cell | 2.07e-12 | 2 |
corneal epithelial cell | 2.32e-12 | 2 |
acinar cell of salivary gland | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 4.17e-30 | 3 |
gustatory system | 4.17e-30 | 3 |
future tongue | 4.17e-30 | 3 |
tonsil | 1.34e-23 | 1 |
mucosa-associated lymphoid tissue | 1.34e-23 | 1 |
lymphoid tissue | 1.34e-23 | 1 |
tonsillar ring | 1.34e-23 | 1 |
mammalian vulva | 5.13e-23 | 1 |
external female genitalia | 5.13e-23 | 1 |
chordate pharynx | 1.67e-20 | 10 |
pharyngeal region of foregut | 1.67e-20 | 10 |
pharynx | 1.04e-18 | 11 |
oral opening | 2.08e-16 | 22 |
anterior region of body | 8.63e-13 | 62 |
craniocervical region | 8.63e-13 | 62 |
mouth | 1.48e-12 | 29 |
stomodeum | 1.48e-12 | 29 |
throat | 2.59e-12 | 2 |
subdivision of head | 2.01e-11 | 49 |
upper respiratory tract | 3.93e-11 | 19 |
orifice | 3.42e-10 | 36 |
head | 5.14e-10 | 56 |
sense organ | 6.57e-09 | 24 |
sensory system | 6.57e-09 | 24 |
entire sense organ system | 6.57e-09 | 24 |
esophagus | 8.31e-09 | 3 |
esophageal region | 8.31e-09 | 3 |
cornea | 8.14e-07 | 4 |
eye surface | 8.14e-07 | 4 |
optic eminence | 8.14e-07 | 4 |
corneal primordium | 8.14e-07 | 4 |