FFCP PHASE1:Hg19::chr10:105315102..105315121,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9148 | |EntrezGene=9148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7761 | |HGNC=7761 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000369777_5end | |association_with_transcript=-15bp_to_ENST00000369777_5end | ||
|cluster_id=chr10:105315102..105315121,+ | |||
|coexpression_cluster_id=C2975 | |coexpression_cluster_id=C2975 | ||
|description=CAGE_peak_9_at_NEURL_5end | |description=CAGE_peak_9_at_NEURL_5end | ||
|id=chr10:105315102..105315121,+ | |id=chr10:105315102..105315121,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.71e-16!42;CL:0000860!1.48e-14!45;CL:0002393!2.84e-09!9;CL:0002397!2.84e-09!9;CL:0000766!6.17e-08!76;CL:0002009!9.46e-08!65;CL:0002194!1.28e-07!63;CL:0000576!1.28e-07!63;CL:0000040!1.28e-07!63;CL:0000559!1.28e-07!63;CL:0000557!1.77e-07!71;CL:0000839!4.01e-07!70 | |ontology_enrichment_celltype=CL:0002057!2.71e-16!42;CL:0000860!1.48e-14!45;CL:0002393!2.84e-09!9;CL:0002397!2.84e-09!9;CL:0000766!6.17e-08!76;CL:0002009!9.46e-08!65;CL:0002194!1.28e-07!63;CL:0000576!1.28e-07!63;CL:0000040!1.28e-07!63;CL:0000559!1.28e-07!63;CL:0000557!1.77e-07!71;CL:0000839!4.01e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000875;1.26e-10;3!CL:0002396;1.26e-10;3!CL:0002393;2.72e-08;6!CL:0002397;2.72e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.37e-16,9;CL:0002397,2.37e-16,9;CL:0000875,1.27e-10,3;CL:0002396,1.27e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.96e-10;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.20e-38!115;UBERON:0001049!1.36e-21!57;UBERON:0005068!1.36e-21!57;UBERON:0006241!1.36e-21!57;UBERON:0007135!1.36e-21!57;UBERON:0002780!3.57e-19!41;UBERON:0001890!3.57e-19!41;UBERON:0006240!3.57e-19!41;UBERON:0002616!4.17e-19!59;UBERON:0003080!1.78e-18!42;UBERON:0002020!7.25e-16!34;UBERON:0003528!7.25e-16!34;UBERON:0000955!4.55e-15!69;UBERON:0006238!4.55e-15!69;UBERON:0001869!4.89e-15!32;UBERON:0001893!7.50e-15!34;UBERON:0001950!2.02e-14!20;UBERON:0002791!3.91e-14!33;UBERON:0002619!5.65e-14!22;UBERON:0003075!1.98e-12!86;UBERON:0007284!1.98e-12!86;UBERON:0001017!2.26e-12!82;UBERON:0005743!3.41e-12!86;UBERON:0000956!1.18e-11!25;UBERON:0000203!1.18e-11!25;UBERON:0002346!2.53e-11!90;UBERON:0003056!8.65e-11!61;UBERON:0000073!6.62e-10!94;UBERON:0001016!6.62e-10!94;UBERON:0002390!1.02e-09!102;UBERON:0003061!1.02e-09!102;UBERON:0000153!1.95e-09!129;UBERON:0007811!1.95e-09!129;UBERON:0000062!6.07e-09!511;UBERON:0002193!2.58e-08!112;UBERON:0000033!2.61e-08!123;UBERON:0000922!2.68e-08!612;UBERON:0000468!2.64e-07!659 | |ontology_enrichment_uberon=UBERON:0007023!2.20e-38!115;UBERON:0001049!1.36e-21!57;UBERON:0005068!1.36e-21!57;UBERON:0006241!1.36e-21!57;UBERON:0007135!1.36e-21!57;UBERON:0002780!3.57e-19!41;UBERON:0001890!3.57e-19!41;UBERON:0006240!3.57e-19!41;UBERON:0002616!4.17e-19!59;UBERON:0003080!1.78e-18!42;UBERON:0002020!7.25e-16!34;UBERON:0003528!7.25e-16!34;UBERON:0000955!4.55e-15!69;UBERON:0006238!4.55e-15!69;UBERON:0001869!4.89e-15!32;UBERON:0001893!7.50e-15!34;UBERON:0001950!2.02e-14!20;UBERON:0002791!3.91e-14!33;UBERON:0002619!5.65e-14!22;UBERON:0003075!1.98e-12!86;UBERON:0007284!1.98e-12!86;UBERON:0001017!2.26e-12!82;UBERON:0005743!3.41e-12!86;UBERON:0000956!1.18e-11!25;UBERON:0000203!1.18e-11!25;UBERON:0002346!2.53e-11!90;UBERON:0003056!8.65e-11!61;UBERON:0000073!6.62e-10!94;UBERON:0001016!6.62e-10!94;UBERON:0002390!1.02e-09!102;UBERON:0003061!1.02e-09!102;UBERON:0000153!1.95e-09!129;UBERON:0007811!1.95e-09!129;UBERON:0000062!6.07e-09!511;UBERON:0002193!2.58e-08!112;UBERON:0000033!2.61e-08!123;UBERON:0000922!2.68e-08!612;UBERON:0000468!2.64e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.44e-09;17!UBERON:0005409;6.22e-09;22!UBERON:0003296;3.70e-07;4!UBERON:0010133;3.70e-07;4!UBERON:0001905;3.92e-07;2!UBERON:0002757;3.92e-07;2!UBERON:0010134;3.92e-07;2!UBERON:0005408;3.92e-07;2!UBERON:0001899;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.17e-21,114;UBERON:0000160,1.26e-09,17;UBERON:0000073,4.81e-08,53;UBERON:0002616,4.81e-08,53;UBERON:0005409,9.54e-08,25;UBERON:0001049,1.90e-07,56;UBERON:0005068,1.90e-07,56;UBERON:0006241,1.90e-07,56;UBERON:0007135,1.90e-07,56;UBERON:0003296,2.90e-07,4;UBERON:0010133,2.90e-07,4;UBERON:0001905,4.05e-07,2;UBERON:0002757,4.05e-07,2;UBERON:0010134,4.05e-07,2;UBERON:0005408,4.05e-07,2;UBERON:0001899,4.05e-07,2;UBERON:0000059,9.15e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,0.383829398097213,2.94150634300544,0,0,0,0,0,0,2.76997704265939,0,0.434021741431704,0,0,0,0.436194716338694,1.51150377475524,1.69808842831471,0.232429036905685,0.822335776043652,0.619412741790207,0,0.768482119587302,0.47296445977717,0,0,0,0.188242339542605,0.545812300115692,0.449446968890169,0,0.962787081228281,0,0.329851300186716,0.797854630486527,0.426224750532694,0,0,0.622822248995575,0.251248665256743,0,0.65156653411535,0.605399502633369,0.368277635987565,0.632924774881769,5.70389273042243,9.779797798392,4.40283155567589,0,0.450530678524519,0,20.2359048056286,39.3855020854198,16.4397738388171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0,0.116193942869518,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,1.2942852049117,0.426910231213777,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98818933778395,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,0.476463550915578,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0.140669416410513,0,0,0,0,1.65770349318689,4.03092396566842,0,0,0,0,0,0,1.38100767891707,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0.347249989866585,1.77148277162768,0,6.10326945268333,6.85591411573593,6.2064999980245,0.219385397153973,0,0,1.23120413606075,0,0.23056390438806,2.87224462111271,3.36806852958225,4.14701507651495,0.457987967009312,1.06606955203727,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,10.9478812418636,4.33442066066362,8.55442202907076,0,0,0,0,2.40773294189637,0.234264445725339,0,0.586993856796269,0,1.18375320854817,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4055934451841,0,0,0,0,0.0969890164884194,0,10.3951140759045,0,0,0.759729551470544,0.782205530939212,0,0.640358984218058,0,0,0,7.72177490378841,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.607495566580247,0,0.315222829196793,0.209818352539992,0,0,1.91915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,1.65695622138878,0,0,0,0,0,0.2506898940227,0,0,0.314108192500469,1.77213635993397,0.732157589411779,0.250381861413,0,1.44207766997908,0.124192805882767,0,0,0,0,0.941063278792687,4.21501415226193,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,1.15748422962549,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0.642292250964595,1.41696576325585,0.798169295285756,0.615349092722265,0.252071696221718,1.10651603942749,0.807378228159255,0,0,0.943757786781923,0,0.115525666150338,0,0,0,0,0,0,0.785720083444267,0,0.147856086217045,0.607838261565552,1.56215619722769,0.413373593002368,0.570742291745161,0.546974809018219,0,1.98484471355718,0,0,5.35701835878287,5.38053955550118,0.606965604236632,1.82129753081038,5.49954695008361,0,0,0.679697329768317,1.18390992413128,0,0,1.41287567130925,0.157115589916002,0,12.7842220871329,0,0,6.86174824095901,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,1.29485767437579,2.87455859197492,1.1598144313382,0.485710993059139,0.467878926924211,0.795803100645473,0,0,0,0.452888530700021,4.78479780269257,5.24542945209498,10.817297816315,5.88355972209373,0,0.785233868459781,0,0,0,0.0939839179798536,0.322289439867886,0,0,0,0,1.46067277649303,0,0.143339583151451,0,1.35982980381829,0,6.87734892670021,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0.606229585745915,0,0.829169439458779,0,5.11761556562354,0.476128862927481,0.0645889098360061,0.186224142887574,0,0.0636471582781649,0.202117188958219,6.96693593270276,4.10679961302337,0.26940821205835,0.0717222053926763,0.665320713092027,0.0814032686109745,0.106727345877715,0,0,0,4.52293343476606,1.62758471326295,1.33151354837103,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,0.383829398097213,2.94150634300544,0,0,0,0,0,0,2.76997704265939,0,0.434021741431704,0,0,0,0.436194716338694,1.51150377475524,1.69808842831471,0.232429036905685,0.822335776043652,0.619412741790207,0,0.768482119587302,0.47296445977717,0,0,0,0.188242339542605,0.545812300115692,0.449446968890169,0,0.962787081228281,0,0.329851300186716,0.797854630486527,0.426224750532694,0,0,0.622822248995575,0.251248665256743,0,0.65156653411535,0.605399502633369,0.368277635987565,0.632924774881769,5.70389273042243,9.779797798392,4.40283155567589,0,0.450530678524519,0,20.2359048056286,39.3855020854198,16.4397738388171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0,0.116193942869518,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,1.2942852049117,0.426910231213777,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98818933778395,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,0.476463550915578,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0.140669416410513,0,0,0,0,1.65770349318689,4.03092396566842,0,0,0,0,0,0,1.38100767891707,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0.347249989866585,1.77148277162768,0,6.10326945268333,6.85591411573593,6.2064999980245,0.219385397153973,0,0,1.23120413606075,0,0.23056390438806,2.87224462111271,3.36806852958225,4.14701507651495,0.457987967009312,1.06606955203727,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,10.9478812418636,4.33442066066362,8.55442202907076,0,0,0,0,2.40773294189637,0.234264445725339,0,0.586993856796269,0,1.18375320854817,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4055934451841,0,0,0,0,0.0969890164884194,0,10.3951140759045,0,0,0.759729551470544,0.782205530939212,0,0.640358984218058,0,0,0,7.72177490378841,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.607495566580247,0,0.315222829196793,0.209818352539992,0,0,1.91915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,1.65695622138878,0,0,0,0,0,0.2506898940227,0,0,0.314108192500469,1.77213635993397,0.732157589411779,0.250381861413,0,1.44207766997908,0.124192805882767,0,0,0,0,0.941063278792687,4.21501415226193,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,1.15748422962549,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0.642292250964595,1.41696576325585,0.798169295285756,0.615349092722265,0.252071696221718,1.10651603942749,0.807378228159255,0,0,0.943757786781923,0,0.115525666150338,0,0,0,0,0,0,0.785720083444267,0,0.147856086217045,0.607838261565552,1.56215619722769,0.413373593002368,0.570742291745161,0.546974809018219,0,1.98484471355718,0,0,5.35701835878287,5.38053955550118,0.606965604236632,1.82129753081038,5.49954695008361,0,0,0.679697329768317,1.18390992413128,0,0,1.41287567130925,0.157115589916002,0,12.7842220871329,0,0,6.86174824095901,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,1.29485767437579,2.87455859197492,1.1598144313382,0.485710993059139,0.467878926924211,0.795803100645473,0,0,0,0.452888530700021,4.78479780269257,5.24542945209498,10.817297816315,5.88355972209373,0,0.785233868459781,0,0,0,0.0939839179798536,0.322289439867886,0,0,0,0,1.46067277649303,0,0.143339583151451,0,1.35982980381829,0,6.87734892670021,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0.606229585745915,0,0.829169439458779,0,5.11761556562354,0.476128862927481,0.0645889098360061,0.186224142887574,0,0.0636471582781649,0.202117188958219,6.96693593270276,4.10679961302337,0.26940821205835,0.0717222053926763,0.665320713092027,0.0814032686109745,0.106727345877715,0,0,0,4.52293343476606,1.62758471326295,1.33151354837103,0,0 | ||
|short_description=p9@NEURL | |short_description=p9@NEURL | ||
}} | }} |
Latest revision as of 03:53, 16 September 2015
Short description: | p9@NEURL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NEURL_5end |
Coexpression cluster: | C2975_CD14CD16_CD14_smallcell_cerebellum_eye_pineal_merkel |
Association with transcript: | -15bp_to_ENST00000369777_5end |
EntrezGene: | NEURL |
HGNC: | 7761 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 2.37e-16 | 9 |
CD14-positive, CD16-positive monocyte | 2.37e-16 | 9 |
non-classical monocyte | 1.27e-10 | 3 |
CD14-low, CD16-positive monocyte | 1.27e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.17e-21 | 114 |
intestine | 1.26e-09 | 17 |
regional part of nervous system | 4.81e-08 | 53 |
regional part of brain | 4.81e-08 | 53 |
gastrointestinal system | 9.54e-08 | 25 |
neural tube | 1.90e-07 | 56 |
neural rod | 1.90e-07 | 56 |
future spinal cord | 1.90e-07 | 56 |
neural keel | 1.90e-07 | 56 |
gland of diencephalon | 2.90e-07 | 4 |
neuroendocrine gland | 2.90e-07 | 4 |
pineal body | 4.05e-07 | 2 |
regional part of epithalamus | 4.05e-07 | 2 |
secretory circumventricular organ | 4.05e-07 | 2 |
circumventricular organ | 4.05e-07 | 2 |
epithalamus | 4.05e-07 | 2 |
large intestine | 9.15e-07 | 11 |