FFCP PHASE1:Hg19::chr10:105615456..105615531,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9644 | |EntrezGene=9644 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23664 | |HGNC=23664 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TCZ1 | |UniProt=Q5TCZ1 | ||
|association_with_transcript=-155bp_to_ENST00000369774_5end | |association_with_transcript=-155bp_to_ENST00000369774_5end | ||
|cluster_id=chr10:105615456..105615531,- | |||
|coexpression_cluster_id=C2976 | |||
|description=CAGE_peak_3_at_SH3PXD2A_5end | |description=CAGE_peak_3_at_SH3PXD2A_5end | ||
|id=chr10:105615456..105615531,- | |id=chr10:105615456..105615531,- | ||
|ontology_enrichment_celltype=CL:0000220!1.67e-08!246;CL:0002321!1.90e-08!248 | |ontology_enrichment_celltype=CL:0000220!1.67e-08!246;CL:0002321!1.90e-08!248 | ||
|ontology_enrichment_celltype_v019=CL:0002159;9.01e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.52e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!3.40e-16!173;UBERON:0006601!3.40e-16!173;UBERON:0000468!9.54e-15!659;UBERON:0004121!1.04e-14!169;UBERON:0000475!3.15e-14!365;UBERON:0000467!3.15e-14!625;UBERON:0000480!6.44e-14!626;UBERON:0003102!3.00e-12!95;UBERON:0004111!1.29e-11!241;UBERON:0007023!3.04e-11!115;UBERON:0000922!1.17e-10!612;UBERON:0002050!3.79e-10!605;UBERON:0005423!3.79e-10!605;UBERON:0000923!7.30e-10!604;UBERON:0005291!7.30e-10!604;UBERON:0006598!7.30e-10!604;UBERON:0002532!7.30e-10!604;UBERON:0000483!7.46e-10!309;UBERON:0000033!1.06e-09!123;UBERON:0000119!1.66e-09!312;UBERON:0000153!1.73e-09!129;UBERON:0007811!1.73e-09!129;UBERON:0000481!9.94e-09!347;UBERON:0000165!5.40e-08!28;UBERON:0000930!5.40e-08!28;UBERON:0000166!9.66e-08!21;UBERON:0001049!1.19e-07!57;UBERON:0005068!1.19e-07!57;UBERON:0006241!1.19e-07!57;UBERON:0007135!1.19e-07!57;UBERON:0000477!1.40e-07!286;UBERON:0000025!2.57e-07!194;UBERON:0000073!3.16e-07!94;UBERON:0001016!3.16e-07!94;UBERON:0002097!5.27e-07!40;UBERON:0001017!5.73e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;3.01e-08;28!UBERON:0000161;2.91e-07;19!UBERON:0000166;2.91e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.92e-16,171;UBERON:0000924,6.92e-16,171;UBERON:0006601,6.92e-16,171;UBERON:0003102,6.44e-14,99;UBERON:0002050,3.98e-12,564;UBERON:0007023,6.62e-11,114;UBERON:0000923,8.39e-11,560;UBERON:0010316,8.39e-11,560;UBERON:0005291,8.39e-11,560;UBERON:0006598,8.39e-11,560;UBERON:0010317,8.39e-11,560;UBERON:0002532,8.39e-11,560;UBERON:0005423,1.88e-10,581;UBERON:0000922,2.34e-10,592;UBERON:0004111,5.86e-10,240;UBERON:0010371,6.76e-09,104;UBERON:0000483,7.82e-09,306;UBERON:0000119,2.38e-08,309;UBERON:0011216,2.76e-08,223;UBERON:0000165,5.42e-08,29;UBERON:0000930,5.42e-08,29;UBERON:0000166,1.13e-07,22;UBERON:0001049,2.27e-07,56;UBERON:0005068,2.27e-07,56;UBERON:0006241,2.27e-07,56;UBERON:0007135,2.27e-07,56;UBERON:0002097,3.23e-07,41;UBERON:0001016,4.41e-07,89;UBERON:0002199,5.97e-07,46;UBERON:0002416,5.97e-07,46;UBERON:0000073,9.00e-07,53;UBERON:0002616,9.00e-07,53 | |||
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| ||
|short_description=p3@SH3PXD2A | |short_description=p3@SH3PXD2A | ||
}} | }} |
Latest revision as of 04:24, 16 September 2015
Short description: | p3@SH3PXD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SH3PXD2A_5end |
Coexpression cluster: | C2976_Small_Gingival_Urothelial_keratoacanthoma_Keratinocyte_neuroectodermal_Bronchial |
Association with transcript: | -155bp_to_ENST00000369774_5end |
EntrezGene: | SH3PXD2A |
HGNC: | 23664 |
UniProt: | Q5TCZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.52e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.92e-16 | 171 |
ectoderm | 6.92e-16 | 171 |
presumptive ectoderm | 6.92e-16 | 171 |
surface structure | 6.44e-14 | 99 |
embryonic structure | 3.98e-12 | 564 |
adult organism | 6.62e-11 | 114 |
germ layer | 8.39e-11 | 560 |
germ layer / neural crest | 8.39e-11 | 560 |
embryonic tissue | 8.39e-11 | 560 |
presumptive structure | 8.39e-11 | 560 |
germ layer / neural crest derived structure | 8.39e-11 | 560 |
epiblast (generic) | 8.39e-11 | 560 |
developing anatomical structure | 1.88e-10 | 581 |
embryo | 2.34e-10 | 592 |
anatomical conduit | 5.86e-10 | 240 |
ecto-epithelium | 6.76e-09 | 104 |
epithelium | 7.82e-09 | 306 |
cell layer | 2.38e-08 | 309 |
organ system subdivision | 2.76e-08 | 223 |
mouth | 5.42e-08 | 29 |
stomodeum | 5.42e-08 | 29 |
oral opening | 1.13e-07 | 22 |
neural tube | 2.27e-07 | 56 |
neural rod | 2.27e-07 | 56 |
future spinal cord | 2.27e-07 | 56 |
neural keel | 2.27e-07 | 56 |
skin of body | 3.23e-07 | 41 |
nervous system | 4.41e-07 | 89 |
integument | 5.97e-07 | 46 |
integumental system | 5.97e-07 | 46 |
regional part of nervous system | 9.00e-07 | 53 |
regional part of brain | 9.00e-07 | 53 |