FFCP PHASE1:Hg19::chr11:11985769..11985800,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27122 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2893 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=185bp_to_AF052161_5end | |||
|cluster_id=chr11:11985769..11985800,- | |||
|description=CAGE_peak_13_at_DKK3_5end | |||
|id=chr11:11985769..11985800,- | |||
|ontology_enrichment_celltype=CL:0000057!7.16e-09!75;CL:0000055!1.03e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0002559;8.02e-09;5!CL:0000346;8.08e-09;3!CL:1000428;8.08e-09;3!CL:0002593;5.26e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,6.00e-09,5;CL:0000346,6.01e-09,3;CL:1000428,6.01e-09,3;CL:0002593,6.86e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;3.25e-09;3!DOID:127;3.25e-09;3!DOID:0060072;5.45e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.58e-09,3;DOID:127,3.58e-09,3;DOID:0060072,5.85e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004121!2.69e-12!169;UBERON:0000475!4.55e-12!365;UBERON:0000033!1.63e-11!123;UBERON:0000924!2.37e-11!173;UBERON:0006601!2.37e-11!173;UBERON:0000467!1.42e-10!625;UBERON:0001049!1.80e-10!57;UBERON:0005068!1.80e-10!57;UBERON:0006241!1.80e-10!57;UBERON:0007135!1.80e-10!57;UBERON:0000468!1.83e-10!659;UBERON:0000480!1.95e-10!626;UBERON:0000153!2.56e-10!129;UBERON:0007811!2.56e-10!129;UBERON:0001017!2.72e-10!82;UBERON:0005743!4.05e-10!86;UBERON:0000955!7.07e-10!69;UBERON:0006238!7.07e-10!69;UBERON:0002616!1.78e-09!59;UBERON:0000483!2.20e-09!309;UBERON:0000119!6.17e-09!312;UBERON:0002020!9.99e-09!34;UBERON:0003528!9.99e-09!34;UBERON:0003080!1.87e-08!42;UBERON:0001893!2.49e-08!34;UBERON:0000477!2.53e-08!286;UBERON:0003075!2.91e-08!86;UBERON:0007284!2.91e-08!86;UBERON:0002791!3.65e-08!33;UBERON:0001869!3.81e-08!32;UBERON:0002780!4.75e-08!41;UBERON:0001890!4.75e-08!41;UBERON:0006240!4.75e-08!41;UBERON:0004111!4.91e-08!241;UBERON:0000073!5.44e-08!94;UBERON:0001016!5.44e-08!94;UBERON:0003102!6.78e-08!95;UBERON:0003056!2.13e-07!61;UBERON:0002346!3.20e-07!90;UBERON:0000062!3.40e-07!511;UBERON:0002097!3.59e-07!40;UBERON:0000064!5.86e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;8.02e-09;5!UBERON:0000412;8.08e-09;3!UBERON:0001992;8.08e-09;3!UBERON:0002456;5.26e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,6.00e-09,5;UBERON:0005086,6.00e-09,5;UBERON:0000412,6.01e-09,3;UBERON:0001992,6.01e-09,3;UBERON:0005631,1.61e-08,14;UBERON:0000158,1.61e-08,14;UBERON:0004871,3.42e-08,8;UBERON:0002456,6.86e-07,2 | |||
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| |||
|short_description=p13@DKK3 | |||
}} |
Latest revision as of 04:31, 16 September 2015
Short description: | p13@DKK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_DKK3_5end |
Coexpression cluster: | NA |
Association with transcript: | 185bp_to_AF052161_5end |
EntrezGene: | DKK3 |
HGNC: | 2893 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 6.00e-09 | 5 |
hair follicle dermal papilla cell | 6.01e-09 | 3 |
stem cell of epidermis | 6.01e-09 | 3 |
smooth muscle cell of the internal thoracic artery | 6.86e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 6.00e-09 | 5 |
hair follicle placode | 6.00e-09 | 5 |
dermal papilla | 6.01e-09 | 3 |
papillary layer of dermis | 6.01e-09 | 3 |
extraembryonic membrane | 1.61e-08 | 14 |
membranous layer | 1.61e-08 | 14 |
somatic layer of lateral plate mesoderm | 3.42e-08 | 8 |
internal thoracic artery | 6.86e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.58e-09 | 3 |
leiomyoma | 3.58e-09 | 3 |
benign neoplasm | 5.85e-07 | 4 |