FFCP PHASE1:Hg19::chr12:10875636..10875638,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8531 | |EntrezGene=8531 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2428 | |HGNC=2428 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-126bp_to_ENST00000540447_5end | |association_with_transcript=-126bp_to_ENST00000540447_5end | ||
|cluster_id=chr12:10875636..10875638,- | |||
|description=CAGE_peak_38_at_CSDA_5end | |description=CAGE_peak_38_at_CSDA_5end | ||
|id=chr12:10875636..10875638,- | |id=chr12:10875636..10875638,- | ||
|ontology_enrichment_celltype=CL:0002622!8.71e-08!3 | |ontology_enrichment_celltype=CL:0002622!8.71e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002188;1.83e-14;5!CL:1000746;9.89e-11;7!CL:1000612;9.89e-11;7!CL:0002681;8.38e-07;12!CL:0002584;8.38e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,1.83e-14,5;CL:1000746,9.89e-11,7;CL:1000612,9.89e-11,7;CL:0002681,8.38e-07,12;CL:0002584,8.38e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003101!1.87e-09!22;UBERON:0000079!1.87e-09!22;UBERON:0001046!4.29e-09!19;UBERON:0000162!9.48e-08!14;UBERON:0001353!9.48e-08!14;UBERON:0000163!9.48e-08!14;UBERON:0006866!9.48e-08!14;UBERON:0000164!9.48e-08!14;UBERON:0000931!9.48e-08!14;UBERON:0002367!1.64e-07!11;UBERON:0010147!1.64e-07!11;UBERON:0009846!1.64e-07!11;UBERON:0003353!1.64e-07!11;UBERON:0004902!1.64e-07!11;UBERON:0003820!1.64e-07!11;UBERON:0009847!1.64e-07!11;UBERON:0004122!3.66e-07!15;UBERON:0002081!7.82e-07!2;UBERON:0003937!7.95e-07!12;UBERON:0005399!7.95e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;9.89e-11;7!UBERON:0001229;9.89e-11;7!UBERON:0001225;8.38e-07;12!UBERON:0008987;8.38e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,9.89e-11,7;UBERON:0000074,9.89e-11,7;UBERON:0001229,9.89e-11,7;UBERON:0001230,9.89e-11,7;UBERON:0003220,9.89e-11,7;UBERON:0005749,9.89e-11,7;UBERON:0004199,9.89e-11,7;UBERON:0004209,9.89e-11,7;UBERON:0004198,9.89e-11,7;UBERON:0005103,1.47e-09,8;UBERON:0000083,1.47e-09,8;UBERON:0009201,1.47e-09,8;UBERON:0006553,1.47e-09,8;UBERON:0003074,1.47e-09,8;UBERON:0003060,1.47e-09,8;UBERON:0000080,1.21e-08,9;UBERON:0002120,1.21e-08,9;UBERON:0004875,1.21e-08,9;UBERON:0005721,1.21e-08,9;UBERON:0005754,1.21e-08,9;UBERON:0007297,1.21e-08,9;UBERON:0004876,2.63e-07,11;UBERON:0001225,8.38e-07,12;UBERON:0008987,8.38e-07,12;UBERON:0003887,8.38e-07,12 | |||
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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0.368323955743585,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.303298235083296,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0.407955318967927,0,0.0918948995348449,0,0.454672189309436,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p38@CSDA | |short_description=p38@CSDA | ||
}} | }} |
Latest revision as of 04:38, 16 September 2015
Short description: | p38@CSDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_CSDA_5end |
Coexpression cluster: | NA |
Association with transcript: | -126bp_to_ENST00000540447_5end |
EntrezGene: | CSDA |
HGNC: | 2428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 1.83e-14 | 5 |
glomerular cell | 9.89e-11 | 7 |
kidney corpuscule cell | 9.89e-11 | 7 |
kidney cortical cell | 8.38e-07 | 12 |
renal cortical epithelial cell | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 9.89e-11 | 7 |
renal glomerulus | 9.89e-11 | 7 |
renal corpuscle | 9.89e-11 | 7 |
glomerular capsule | 9.89e-11 | 7 |
metanephric mesenchyme | 9.89e-11 | 7 |
glomerular tuft | 9.89e-11 | 7 |
S-shaped body | 9.89e-11 | 7 |
renal vesicle | 9.89e-11 | 7 |
comma-shaped body | 9.89e-11 | 7 |
mesonephric epithelium | 1.47e-09 | 8 |
mesonephric tubule | 1.47e-09 | 8 |
nephric duct | 1.47e-09 | 8 |
renal duct | 1.47e-09 | 8 |
mesonephric duct | 1.47e-09 | 8 |
pronephric duct | 1.47e-09 | 8 |
mesonephros | 1.21e-08 | 9 |
pronephros | 1.21e-08 | 9 |
nephrogenic cord | 1.21e-08 | 9 |
pronephric mesoderm | 1.21e-08 | 9 |
rostral part of nephrogenic cord | 1.21e-08 | 9 |
presumptive pronephric mesoderm | 1.21e-08 | 9 |
urogenital ridge | 2.63e-07 | 11 |
cortex of kidney | 8.38e-07 | 12 |
renal parenchyma | 8.38e-07 | 12 |
intraembryonic coelom | 8.38e-07 | 12 |