FFCP PHASE1:Hg19::chr2:238600933..238600985,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=9208 | |EntrezGene=9208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=6702 | |HGNC=6702 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q32MZ4,C9JTC6 | |UniProt=Q32MZ4,C9JTC6 | ||
|association_with_transcript=0bp_to_ENST00000392000,ENST00000420665_5end | |association_with_transcript=0bp_to_ENST00000392000,ENST00000420665_5end | ||
|cluster_id=chr2:238600933..238600985,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_3_at_LRRFIP1_5end | |description=CAGE_peak_3_at_LRRFIP1_5end | ||
Latest revision as of 04:43, 16 September 2015
| Short description: | p3@LRRFIP1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_LRRFIP1_5end |
| Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
| Association with transcript: | 0bp_to_ENST00000392000, ENST00000420665_5end |
| EntrezGene: | LRRFIP1 |
| HGNC: | 6702 |
| UniProt: | Q32MZ4C9JTC6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@LRRFIP1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 8.73e-50 | 136 |
| hematopoietic stem cell | 7.03e-44 | 168 |
| hematopoietic oligopotent progenitor cell | 5.51e-42 | 161 |
| hematopoietic multipotent progenitor cell | 5.51e-42 | 161 |
| hematopoietic lineage restricted progenitor cell | 1.69e-40 | 120 |
| hematopoietic cell | 8.83e-40 | 177 |
| nongranular leukocyte | 1.66e-39 | 115 |
| myeloid leukocyte | 3.81e-38 | 72 |
| granulocyte monocyte progenitor cell | 3.46e-35 | 67 |
| macrophage dendritic cell progenitor | 3.71e-32 | 61 |
Showing 1 to 10 of 31 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 4.69e-35 | 98 |
| blood island | 4.69e-35 | 98 |
| hemolymphoid system | 6.26e-31 | 108 |
| bone marrow | 1.53e-28 | 76 |
| immune system | 6.91e-25 | 93 |
| bone element | 1.42e-24 | 82 |
| skeletal element | 7.70e-21 | 90 |
| skeletal system | 2.83e-16 | 100 |
| lateral plate mesoderm | 4.05e-13 | 203 |
| connective tissue | 5.40e-08 | 371 |
Showing 1 to 10 of 13 entries
