FFCP PHASE1:Hg19::chr11:119991589..119991609,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23650 | |EntrezGene=23650 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17274 | |HGNC=17274 | ||
|TSSclassifier=strong | |||
|UniProt=E9PPX1 | |UniProt=E9PPX1 | ||
|association_with_transcript=0bp_to_ENST00000526881_5end | |||
|cluster_id=chr11:119991589..119991609,- | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_19_at_TRIM29_5end | |||
|id=chr11:119991589..119991609,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.77e-18;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.93e-18,5 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.67e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!1.87e-18!3;UBERON:0005290!1.87e-18!3;UBERON:0010096!1.87e-18!3;UBERON:0002298!4.27e-18!8;UBERON:0000341!3.93e-13!2;UBERON:0003127!5.29e-13!2;UBERON:0002148!2.29e-12!2;UBERON:0009662!2.29e-12!2;UBERON:0004733!5.37e-12!12;UBERON:0002028!5.37e-12!12;UBERON:0007277!5.37e-12!12;UBERON:0004732!4.69e-11!13;UBERON:0007023!1.04e-10!115;UBERON:0003076!1.50e-09!15;UBERON:0003057!1.50e-09!15;UBERON:0001042!3.27e-09!10;UBERON:0009145!3.27e-09!10;UBERON:0000065!3.40e-09!53;UBERON:0001723!8.74e-09!3;UBERON:0001033!8.74e-09!3;UBERON:0010056!8.74e-09!3;UBERON:0000988!1.56e-08!3;UBERON:0006331!1.56e-08!3;UBERON:0006562!2.20e-08!11;UBERON:0001004!1.13e-07!72;UBERON:0005178!1.21e-07!34;UBERON:0002224!1.21e-07!34;UBERON:0000063!1.85e-07!97;UBERON:0002171!2.10e-07!1;UBERON:0006518!2.10e-07!1;UBERON:0008949!2.10e-07!1;UBERON:0000101!2.10e-07!1;UBERON:0002167!2.10e-07!1;UBERON:0005181!2.12e-07!35;UBERON:0001041!2.48e-07!98;UBERON:0000077!7.89e-07!130;UBERON:0002372!9.73e-07!1;UBERON:0001961!9.73e-07!1;UBERON:0001744!9.73e-07!1;UBERON:0001735!9.73e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;1.91e-44;2!UBERON:0002171;3.67e-23;1!UBERON:0006518;3.67e-23;1!UBERON:0008949;3.67e-23;1!UBERON:0000101;3.67e-23;1!UBERON:0002167;3.67e-23;1!UBERON:0000974;1.41e-15;6!UBERON:0000305;1.69e-13;7!UBERON:0003127;1.48e-12;2!UBERON:0005631;9.65e-10;10!UBERON:0000158;9.65e-10;10!UBERON:0001896;8.96e-09;3!UBERON:0005290;8.96e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.39e-44,2;UBERON:0002171,4.10e-23,1;UBERON:0006518,4.10e-23,1;UBERON:0008949,4.10e-23,1;UBERON:0000101,4.10e-23,1;UBERON:0002167,4.10e-23,1;UBERON:0000305,1.80e-13,7;UBERON:0003127,1.48e-12,2;UBERON:0004871,6.51e-12,8;UBERON:0000974,1.01e-09,10;UBERON:0001896,8.96e-09,3;UBERON:0005290,8.96e-09,3;UBERON:0010096,8.96e-09,3;UBERON:0005631,3.34e-07,14;UBERON:0000158,3.34e-07,14 | |||
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|short_description=p19@TRIM29 | |||
}} | }} |
Latest revision as of 04:44, 16 September 2015
Short description: | p19@TRIM29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_TRIM29_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 0bp_to_ENST00000526881_5end |
EntrezGene: | TRIM29 |
HGNC: | 17274 |
UniProt: | E9PPX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.93e-18 | 5 |
Ontology term | p-value | n |
---|---|---|
throat | 2.39e-44 | 2 |
lower lobe of right lung | 4.10e-23 | 1 |
right lung lobe | 4.10e-23 | 1 |
lower lobe of lung | 4.10e-23 | 1 |
lobe of lung | 4.10e-23 | 1 |
right lung | 4.10e-23 | 1 |
amnion | 1.80e-13 | 7 |
open tracheal system trachea | 1.48e-12 | 2 |
somatic layer of lateral plate mesoderm | 6.51e-12 | 8 |
neck | 1.01e-09 | 10 |
medulla oblongata | 8.96e-09 | 3 |
myelencephalon | 8.96e-09 | 3 |
future myelencephalon | 8.96e-09 | 3 |
extraembryonic membrane | 3.34e-07 | 14 |
membranous layer | 3.34e-07 | 14 |