FFCP PHASE1:Hg19::chr12:10876282..10876288,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8531 | |EntrezGene=8531 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2428 | |HGNC=2428 | ||
|TSSclassifier=strong | |||
|UniProt=P16989 | |UniProt=P16989 | ||
|association_with_transcript=-329bp_to_NM_001145426,NM_003651,uc001qyt.2,uc001qyu.2_5end | |association_with_transcript=-329bp_to_NM_001145426,NM_003651,uc001qyt.2,uc001qyu.2_5end | ||
|cluster_id=chr12:10876282..10876288,- | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_29_at_CSDA_5end | |description=CAGE_peak_29_at_CSDA_5end | ||
|id=chr12:10876282..10876288,- | |id=chr12:10876282..10876288,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.42e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.66e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0003104;8.96e-08;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;6.72e-26;1!UBERON:0000026;6.72e-26;1!UBERON:0008784;6.72e-26;1!UBERON:0006058;6.72e-26;1!UBERON:0003663;6.72e-26;1!UBERON:0004256;6.72e-26;1!UBERON:0004708;6.72e-26;1!UBERON:0002101;6.72e-26;1!UBERON:0004709;6.72e-26;1!UBERON:0002529;6.72e-26;1!UBERON:0010538;6.72e-26;1!UBERON:0003661;6.72e-26;1!UBERON:0010890;6.72e-26;1!UBERON:0002471;6.72e-26;1!UBERON:0001383;6.72e-26;1!UBERON:0010758;6.72e-26;1!UBERON:0010707;6.72e-26;1!UBERON:0000978;6.72e-26;1!UBERON:0002103;6.72e-26;1!UBERON:0001665;6.72e-26;1!UBERON:0003823;6.72e-26;1!UBERON:0000154;6.72e-26;1!UBERON:0010709;6.72e-26;1!UBERON:0001134;9.86e-15;16!UBERON:0002036;9.86e-15;16!UBERON:0005090;1.14e-13;2!UBERON:0001630;1.14e-13;2!UBERON:0002385;3.60e-08;31!UBERON:0001015;3.60e-08;31!UBERON:0000383;3.60e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,5.93e-26,1;UBERON:0001389,5.93e-26,1;UBERON:0000026,5.93e-26,1;UBERON:0008784,5.93e-26,1;UBERON:0006058,5.93e-26,1;UBERON:0003663,5.93e-26,1;UBERON:0004256,5.93e-26,1;UBERON:0004708,5.93e-26,1;UBERON:0002101,5.93e-26,1;UBERON:0004709,5.93e-26,1;UBERON:0002529,5.93e-26,1;UBERON:0010538,5.93e-26,1;UBERON:0003661,5.93e-26,1;UBERON:0010890,5.93e-26,1;UBERON:0002471,5.93e-26,1;UBERON:0001383,5.93e-26,1;UBERON:0004357,5.93e-26,1;UBERON:0004347,5.93e-26,1;UBERON:0005420,5.93e-26,1;UBERON:0005732,5.93e-26,1;UBERON:0010758,5.93e-26,1;UBERON:0010707,5.93e-26,1;UBERON:0000978,5.93e-26,1;UBERON:0002103,5.93e-26,1;UBERON:0001665,5.93e-26,1;UBERON:0003823,5.93e-26,1;UBERON:0000154,5.93e-26,1;UBERON:0010709,5.93e-26,1;UBERON:0005733,5.93e-26,1;UBERON:0005730,5.93e-26,1;UBERON:0005090,1.07e-13,2;UBERON:0001630,1.07e-13,2 | |||
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| ||
|short_description=p29@CSDA | |short_description=p29@CSDA | ||
}} | }} |
Latest revision as of 04:45, 16 September 2015
Short description: | p29@CSDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_CSDA_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | -329bp_to_NM_001145426, NM_003651, uc001qyt.2, uc001qyu.2_5end |
EntrezGene: | CSDA |
HGNC: | 2428 |
UniProt: | P16989 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.66e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 5.93e-26 | 1 |
soleus muscle | 5.93e-26 | 1 |
appendage | 5.93e-26 | 1 |
lower limb segment | 5.93e-26 | 1 |
multi-limb segment region | 5.93e-26 | 1 |
hindlimb muscle | 5.93e-26 | 1 |
hindlimb zeugopod muscle | 5.93e-26 | 1 |
paired limb/fin | 5.93e-26 | 1 |
limb | 5.93e-26 | 1 |
pelvic appendage | 5.93e-26 | 1 |
limb segment | 5.93e-26 | 1 |
paired limb/fin segment | 5.93e-26 | 1 |
limb muscle | 5.93e-26 | 1 |
pelvic complex muscle | 5.93e-26 | 1 |
zeugopod | 5.93e-26 | 1 |
muscle of leg | 5.93e-26 | 1 |
paired limb/fin bud | 5.93e-26 | 1 |
limb bud | 5.93e-26 | 1 |
pelvic appendage bud | 5.93e-26 | 1 |
limb/fin field | 5.93e-26 | 1 |
subdivision of organism along appendicular axis | 5.93e-26 | 1 |
appendage girdle complex | 5.93e-26 | 1 |
leg | 5.93e-26 | 1 |
hindlimb | 5.93e-26 | 1 |
triceps surae | 5.93e-26 | 1 |
hindlimb zeugopod | 5.93e-26 | 1 |
posterior region of body | 5.93e-26 | 1 |
pelvic complex | 5.93e-26 | 1 |
limb field | 5.93e-26 | 1 |
hindlimb/pelvic fin field | 5.93e-26 | 1 |
muscle structure | 1.07e-13 | 2 |
muscle organ | 1.07e-13 | 2 |