FFCP PHASE1:Hg19::chrX:65259856..65259863,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11326 | |EntrezGene=11326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17032 | |HGNC=17032 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=38bp_to_ENST00000412866_5end | |association_with_transcript=38bp_to_ENST00000412866_5end | ||
|cluster_id=chrX:65259856..65259863,- | |||
|coexpression_cluster_id=C67 | |coexpression_cluster_id=C67 | ||
|description=CAGE_peak_4_at_VSIG4_5end | |description=CAGE_peak_4_at_VSIG4_5end | ||
|id=chrX:65259856..65259863,- | |id=chrX:65259856..65259863,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.69e-23;6!CL:0002619;5.96e-13;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.70e-23,6;CL:0002619,5.99e-13,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.56e-08;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;6.67e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.88e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.31e-67!115;UBERON:0001049!4.63e-19!57;UBERON:0005068!4.63e-19!57;UBERON:0006241!4.63e-19!57;UBERON:0007135!4.63e-19!57;UBERON:0003080!1.35e-16!42;UBERON:0002780!1.61e-15!41;UBERON:0001890!1.61e-15!41;UBERON:0006240!1.61e-15!41;UBERON:0002616!2.82e-15!59;UBERON:0003075!3.54e-15!86;UBERON:0007284!3.54e-15!86;UBERON:0001017!2.54e-14!82;UBERON:0005743!3.36e-14!86;UBERON:0002346!5.05e-14!90;UBERON:0001893!3.40e-13!34;UBERON:0000955!1.53e-12!69;UBERON:0006238!1.53e-12!69;UBERON:0002791!2.02e-12!33;UBERON:0002020!4.96e-12!34;UBERON:0003528!4.96e-12!34;UBERON:0000073!6.76e-12!94;UBERON:0001016!6.76e-12!94;UBERON:0001869!3.01e-11!32;UBERON:0003056!4.19e-11!61;UBERON:0000062!1.00e-09!511;UBERON:0002619!2.52e-09!22;UBERON:0000153!3.58e-09!129;UBERON:0007811!3.58e-09!129;UBERON:0001950!8.68e-09!20;UBERON:0002420!3.76e-08!9;UBERON:0007245!3.76e-08!9;UBERON:0010009!3.76e-08!9;UBERON:0010011!3.76e-08!9;UBERON:0000454!3.76e-08!9;UBERON:0000956!7.53e-08!25;UBERON:0000203!7.53e-08!25;UBERON:0000033!1.21e-07!123;UBERON:0000467!5.42e-07!625;UBERON:0000480!6.18e-07!626;UBERON:0002298!9.46e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!4.31e-67!115;UBERON:0001049!4.63e-19!57;UBERON:0005068!4.63e-19!57;UBERON:0006241!4.63e-19!57;UBERON:0007135!4.63e-19!57;UBERON:0003080!1.35e-16!42;UBERON:0002780!1.61e-15!41;UBERON:0001890!1.61e-15!41;UBERON:0006240!1.61e-15!41;UBERON:0002616!2.82e-15!59;UBERON:0003075!3.54e-15!86;UBERON:0007284!3.54e-15!86;UBERON:0001017!2.54e-14!82;UBERON:0005743!3.36e-14!86;UBERON:0002346!5.05e-14!90;UBERON:0001893!3.40e-13!34;UBERON:0000955!1.53e-12!69;UBERON:0006238!1.53e-12!69;UBERON:0002791!2.02e-12!33;UBERON:0002020!4.96e-12!34;UBERON:0003528!4.96e-12!34;UBERON:0000073!6.76e-12!94;UBERON:0001016!6.76e-12!94;UBERON:0001869!3.01e-11!32;UBERON:0003056!4.19e-11!61;UBERON:0000062!1.00e-09!511;UBERON:0002619!2.52e-09!22;UBERON:0000153!3.58e-09!129;UBERON:0007811!3.58e-09!129;UBERON:0001950!8.68e-09!20;UBERON:0002420!3.76e-08!9;UBERON:0007245!3.76e-08!9;UBERON:0010009!3.76e-08!9;UBERON:0010011!3.76e-08!9;UBERON:0000454!3.76e-08!9;UBERON:0000956!7.53e-08!25;UBERON:0000203!7.53e-08!25;UBERON:0000033!1.21e-07!123;UBERON:0000467!5.42e-07!625;UBERON:0000480!6.18e-07!626;UBERON:0002298!9.46e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.89e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.01e-34,114;UBERON:0001049,1.32e-07,56;UBERON:0005068,1.32e-07,56;UBERON:0006241,1.32e-07,56;UBERON:0007135,1.32e-07,56;UBERON:0001017,3.04e-07,81 | |||
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| ||
|short_description=p4@VSIG4 | |short_description=p4@VSIG4 | ||
}} | }} |
Latest revision as of 04:51, 16 September 2015
Short description: | p4@VSIG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_VSIG4_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 38bp_to_ENST00000412866_5end |
EntrezGene: | VSIG4 |
HGNC: | 17032 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.70e-23 | 6 |
adult endothelial progenitor cell | 5.99e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.01e-34 | 114 |
neural tube | 1.32e-07 | 56 |
neural rod | 1.32e-07 | 56 |
future spinal cord | 1.32e-07 | 56 |
neural keel | 1.32e-07 | 56 |
central nervous system | 3.04e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.88e-08 | 2 |