FFCP PHASE1:Hg19::chr20:388056..388067,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10616 | |EntrezGene=10616 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15864 | |HGNC=15864 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JWR1 | |UniProt=Q5JWR1 | ||
|association_with_transcript=-74bp_to_ENST00000411647_5end | |association_with_transcript=-74bp_to_ENST00000411647_5end | ||
|cluster_id=chr20:388056..388067,+ | |||
|coexpression_cluster_id=C445 | |||
|description=CAGE_peak_10_at_RBCK1_5end | |description=CAGE_peak_10_at_RBCK1_5end | ||
|id=chr20:388056..388067,+ | |id=chr20:388056..388067,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.09e-13!254;CL:0002150!8.43e-08!3;CL:0000861!8.43e-08!3 | |ontology_enrichment_celltype=CL:0000066!3.09e-13!254;CL:0002150!8.43e-08!3;CL:0000861!8.43e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.59e-12;3!CL:0000312;6.55e-08;5!CL:0000240;8.48e-07;6!CL:0000311;8.48e-07;6!CL:0000079;8.48e-07;6!CL:0000237;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.07e-12,3;CL:0000312,7.01e-08,5;CL:0000240,8.97e-07,6;CL:0000311,8.97e-07,6;CL:0000079,8.97e-07,6;CL:0000237,8.97e-07,6;CL:0000036,8.97e-07,6;CL:0000357,8.97e-07,6;CL:0000114,8.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;8.48e-07;6!CL:0000114;8.48e-07;6 | |||
|ontology_enrichment_disease=DOID:305!9.45e-17!106;DOID:162!1.02e-16!235;DOID:0050687!1.38e-16!143;DOID:14566!4.11e-16!239 | |ontology_enrichment_disease=DOID:305!9.45e-17!106;DOID:162!1.02e-16!235;DOID:0050687!1.38e-16!143;DOID:14566!4.11e-16!239 | ||
|ontology_enrichment_disease_v019=DOID:3119;1.99e-10;14!DOID:4362;6.55e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.99e-10,14;DOID:4362,6.55e-08,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.44e-09;4!UBERON:0000945;6.55e-08;5!UBERON:0010039;6.55e-08;5!UBERON:0004907;6.55e-08;5!UBERON:0000002;8.48e-07;6!UBERON:0001560;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.70e-09,4;UBERON:0004907,7.49e-08,5;UBERON:0000002,8.48e-07,6;UBERON:0001560,8.48e-07,6 | |||
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| ||
|short_description=p10@RBCK1 | |short_description=p10@RBCK1 | ||
}} | }} |
Latest revision as of 04:52, 16 September 2015
Short description: | p10@RBCK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RBCK1_5end |
Coexpression cluster: | C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma |
Association with transcript: | -74bp_to_ENST00000411647_5end |
EntrezGene: | RBCK1 |
HGNC: | 15864 |
UniProt: | Q5JWR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.07e-12 | 3 |
keratinocyte | 7.01e-08 | 5 |
stratified squamous epithelial cell | 8.97e-07 | 6 |
keratin accumulating cell | 8.97e-07 | 6 |
stratified epithelial cell | 8.97e-07 | 6 |
keratinizing barrier epithelial cell | 8.97e-07 | 6 |
epithelial fate stem cell | 8.97e-07 | 6 |
stratified epithelial stem cell | 8.97e-07 | 6 |
surface ectodermal cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.70e-09 | 4 |
lower digestive tract | 7.49e-08 | 5 |
uterine cervix | 8.48e-07 | 6 |
neck of organ | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.99e-10 | 14 |
cervical cancer | 6.55e-08 | 5 |