FFCP PHASE1:Hg19::chr20:389126..389137,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:389126..389137,+ to FFCP PHASE1:Hg19::chr20:389126..389137,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10616 | |EntrezGene=10616 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15864 | |HGNC=15864 | ||
|TSSclassifier=strong | |||
|UniProt=A6PVJ5 | |UniProt=A6PVJ5 | ||
|association_with_transcript=139bp_to_ENST00000400247_5end | |||
|cluster_id=chr20:389126..389137,+ | |||
|coexpression_cluster_id=C4033 | |||
|description=CAGE_peak_5_at_RBCK1_5end | |||
|id=chr20:389126..389137,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.77e-12!254;CL:0000548!7.21e-11!679;CL:0000004!7.21e-11!679;CL:0000255!7.21e-11!679;CL:0000012!9.66e-11!682;CL:0000223!4.53e-09!59;CL:0002371!1.60e-08!591;CL:0002321!2.18e-08!248;CL:0000220!2.42e-08!246;CL:0002076!7.69e-08!43;CL:0000003!1.90e-07!722;CL:0000144!2.95e-07!625;CL:0000063!5.89e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.15e-09;4!CL:0000731;1.15e-09;4!CL:0000307;6.95e-08;3!CL:0002368;8.10e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.22e-13,253;CL:0000244,9.18e-10,4;CL:0000731,9.18e-10,4;CL:0002368,6.02e-08,13;CL:0000068,6.68e-08,3;CL:0000069,6.68e-08,3;CL:0000307,6.68e-08,3;CL:0000377,6.68e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000377;6.95e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!2.14e-07!82;UBERON:0003914!7.89e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0005910;2.22e-09;6!UBERON:0000365;1.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005910,2.84e-09,6;UBERON:0000365,8.73e-08,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,1.0007329835313,0.446961094427288,0,0,1.26343974685366,0.522371256399677,0.491467873003018,0.697801167972428,0,0.263766978228454,0.37129905888014,0.331397375727916,0,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0.313454721478088,0,0,0,0.305653622991805,0.164201178899891,0.314843125254717,0,0,0,0,0.90361775633475,8.8740962440029,0.154934401160603,0.284338464974843,0,0.553995408531877,0,0,0.447830948479849,0,0,0.436194716338694,0,0,0,0.411167888021826,0,1.7261543539329,0.256160706529101,0.709446689665756,0.344745680736619,0,0,0,0,0,0.612167784741805,0.641858054152187,0,0.659702600373432,1.99463657621632,2.13112375266347,0,0,1.24564449799115,0.502497330513487,1.0429658368404,1.3031330682307,0.605399502633369,0,1.58231193720442,0.211255286311942,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0.570025487482497,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.445641827540694,0,0,0.270803863765016,0.384273959177026,0.260118695119756,0.493313713811028,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0.318565414324097,0,0,0,0,0,0,0,0.403213486449465,0,0.289648807765598,2.43806866313962,0,0.12786256184353,0.361439152384566,1.50401373190767,0,0,0.486634870302636,0,0,0.087834785693126,0,2.91436230634034,0.741568885568859,0.324547393654683,0.348259474598534,0.26591592103773,0.238490624305342,0.571994910780128,0.371457501329565,1.39133685156694,0,0.694281003215189,0.56530794192401,1.67799774483962,0.825354125820202,0,0,0.35576626268671,0,0,0.760272105718513,0.976248230192678,0.367663080345869,0,0.17859945656816,0.22452937262617,0,0,0,0.366403487860815,1.31780417436063,0,0,0.496971951695318,0.506522046658319,0.132409180813219,0.860509862246441,0,0,2.1349799145941,0.98667019366864,0.311211035399766,0.134710672069688,0.163461903113459,0,0.576175924479999,0.937285727335186,0.624320153660641,0.570471821544449,0.448346041655403,0.117434498643765,0,0.140450806702248,0.61246251376468,0.122834317311768,0.206651562351531,2.37600571456411,0.247266929278557,0,1.43723628363248,0,0.125118519871964,0,0,0,0.300476117813194,0.226864366320042,0,0,0,0,0.206105058476878,0.257640540045629,0,0,0,0,0.0920498986422993,0.323292113637624,0,0.10075209822764,0,0.966304265816484,0.818238361772504,0.573609190778008,0.243947412259191,0.132529768321485,0,0,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0.882926198829301,0.245976877086227,0,1.97550513735526,4.49607013030478,1.3068766413512,0.185176890317059,1.95484983186195,0,0,0.115930404975077,0.117408694235822,0.577465791044295,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0,0.445893486866185,0.93733833986777,1.17587489739202,1.13420077793909,0.895585227028483,0.290633938513962,2.30029607499127,0,0.176096868026452,0,0,0.25248486685276,0.126995788584338,0.381988425558278,0,0,0,0.300343057843917,0.857479297891735,0.112131084345361,0,0.07333828582095,0.646358578788889,0,0,0,0,0.514414748524284,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.434343920002738,0.821905290201534,0.179060963239896,0.560425719967636,0,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,0.749007023947182,0,0.828831026872071,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0.473107245101804,0.234282829985426,1.50473049863859,0,1.03473071292505,0,0.737476674166813,0,1.37060810223918,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,1.02341449813341,0.160853921143607,0,0,0.532685175939381,0,0.519254429183621,0.697262270759755,0.362578348774867,0.802025881213139,2.67034867914099,0.34444334449382,0.364182336013434,0.655622074797121,4.51199612907412,1.15523005656622,0,1.46139224653261,0.316654886678627,0,0.340187410553031,0,1.54227252690289,0,1.50506932156456,0.764628819135115,1.66215201785745,0.447749509444357,0,0,0.256450125116389,0,0.325378394664303,0,0.0915694648183434,0.082509499920588,1.14853107599234,0,0,1.83674364755032,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0,0.0852266274161009,1.60257664164127,1.98341898433174,2.49847087574638,0.638063562472921,1.31505115112215,0.464845549297286,0.31481234683064,0.6970372701606,1.23213432070436,0,0,0.37064843820784,0.715624433709956,0,0.316379424718726,0,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.117812402345686,1.01091240786658,1.58510321173008,0.421258456238981,0.48763373908959,3.1682753652067,0,0.136499911407986,0.424216295861138,1.13008116620243,1.10273068709225,1.32687795048244,0.876901770507525,0.578775534266688,0,0.405820753925408,0,0.845086807596724,0,0.196498082026242,0.35667105148125,0,1.05553817648832,0.329294892959902,0,0,1.44333169088268,4.69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| ||
|short_description=p5@RBCK1 | |||
}} | }} |
Latest revision as of 04:59, 16 September 2015
Short description: | p5@RBCK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RBCK1_5end |
Coexpression cluster: | C4033_Bronchial_bile_renal_signet_Keratinocyte_hepatoma_squamous |
Association with transcript: | 139bp_to_ENST00000400247_5end |
EntrezGene: | RBCK1 |
HGNC: | 15864 |
UniProt: | A6PVJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.22e-13 | 253 |
transitional epithelial cell | 9.18e-10 | 4 |
urothelial cell | 9.18e-10 | 4 |
respiratory epithelial cell | 6.02e-08 | 13 |
duct epithelial cell | 6.68e-08 | 3 |
branched duct epithelial cell | 6.68e-08 | 3 |
tracheal epithelial cell | 6.68e-08 | 3 |
tracheoblast | 6.68e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
transitional epithelium | 2.84e-09 | 6 |
urothelium | 8.73e-08 | 5 |