FFCP PHASE1:Hg19::chr1:1142067..1142076,-: Difference between revisions
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|id=chr1:1142067..1142076,-
|short_description=p4@TNFRSF18
|description=CAGE_peak_4_at_TNFRSF18_5end
|association_with_transcript=0bp_to_ENST00000379268_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8784 | |EntrezGene=8784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11914 | |HGNC=11914 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5U5 | |UniProt=Q9Y5U5 | ||
|association_with_transcript=0bp_to_ENST00000379268_5end | |||
|cluster_id=chr1:1142067..1142076,- | |||
|coexpression_cluster_id=C99 | |||
|description=CAGE_peak_4_at_TNFRSF18_5end | |||
|id=chr1:1142067..1142076,- | |||
|ontology_enrichment_celltype=CL:0000542!2.18e-19!53;CL:0000051!2.18e-19!53;CL:0000838!7.71e-18!52;CL:0000988!1.05e-14!182;CL:0000738!7.16e-14!140;CL:0000037!1.21e-12!172;CL:0000566!1.21e-12!172;CL:0002032!1.51e-12!165;CL:0000837!1.51e-12!165;CL:0000945!1.15e-11!24;CL:0000826!1.15e-11!24;CL:0002031!7.10e-11!124;CL:0000453!2.16e-10!5;CL:0002087!2.61e-10!119;CL:0000080!3.27e-09!6;CL:0000236!5.00e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0001014;3.52e-11;2!CL:0001016;3.52e-11;2!CL:0000623;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.02e-11,2;CL:0001016,3.02e-11,2;CL:0000623,6.78e-08,3;CL:0000825,6.78e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.88e-21;1!DOID:0060061;1.88e-21;1!DOID:8691;1.88e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.88e-21,1;DOID:0060061,1.88e-21,1;DOID:8691,1.88e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.41e-10!7;UBERON:0002370!3.23e-07!4;UBERON:0005058!3.23e-07!4;UBERON:0009113!3.23e-07!4;UBERON:0003295!3.23e-07!4;UBERON:0005562!3.23e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.49e-18;10!UBERON:0000178;1.32e-12;15!UBERON:0000179;1.32e-12;15!UBERON:0000463;1.32e-12;15!UBERON:0000478;4.15e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.53e-18,10;UBERON:0000358,1.53e-18,10;UBERON:0000307,1.53e-18,10;UBERON:0000091,1.53e-18,10;UBERON:0000087,1.53e-18,10;UBERON:0007010,1.53e-18,10;UBERON:0007806,1.53e-18,10;UBERON:0008780,1.53e-18,10;UBERON:0005728,1.53e-18,10;UBERON:0000178,1.35e-12,15;UBERON:0000179,1.35e-12,15;UBERON:0000463,1.35e-12,15;UBERON:0000478,4.20e-08,24 | |||
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| ||
|short_description=p4@TNFRSF18 | |||
}} | }} |
Latest revision as of 05:57, 16 September 2015
Short description: | p4@TNFRSF18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNFRSF18_5end |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | 0bp_to_ENST00000379268_5end |
EntrezGene: | TNFRSF18 |
HGNC: | 11914 |
UniProt: | Q9Y5U5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.02e-11 | 2 |
immature CD1a-positive Langerhans cell | 3.02e-11 | 2 |
natural killer cell | 6.78e-08 | 3 |
pro-NK cell | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.53e-18 | 10 |
blastocyst | 1.53e-18 | 10 |
blastula | 1.53e-18 | 10 |
bilaminar disc | 1.53e-18 | 10 |
inner cell mass | 1.53e-18 | 10 |
cleaving embryo | 1.53e-18 | 10 |
connecting stalk | 1.53e-18 | 10 |
inner cell mass derived epiblast | 1.53e-18 | 10 |
extraembryonic mesoderm | 1.53e-18 | 10 |
blood | 1.35e-12 | 15 |
haemolymphatic fluid | 1.35e-12 | 15 |
organism substance | 1.35e-12 | 15 |
extraembryonic structure | 4.20e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.88e-21 | 1 |
cutaneous T cell lymphoma | 1.88e-21 | 1 |
mycosis fungoides | 1.88e-21 | 1 |