FFCP PHASE1:Hg19::chr10:10836722..10836738,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=207107 | |EntrezGene=207107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=18383 | |HGNC=18383 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=138bp_to_ENST00000446372,NR_027082,uc001ikf.1_5end | |association_with_transcript=138bp_to_ENST00000446372,NR_027082,uc001ikf.1_5end | ||
|cluster_id=chr10:10836722..10836738,- | |||
|coexpression_cluster_id=C1562 | |||
|description=CAGE_peak_6_at_SFTA1P_5end | |description=CAGE_peak_6_at_SFTA1P_5end | ||
|id=chr10:10836722..10836738,- | |id=chr10:10836722..10836738,- | ||
|ontology_enrichment_celltype=CL:0000066!1.02e-14!254;CL:0000077!1.46e-10!19;CL:0000076!5.07e-10!62;CL:0002076!3.00e-09!43;CL:0002166!1.49e-08!3;CL:0000223!6.90e-08!59;CL:0002251!3.47e-07!21 | |ontology_enrichment_celltype=CL:0000066!1.02e-14!254;CL:0000077!1.46e-10!19;CL:0000076!5.07e-10!62;CL:0002076!3.00e-09!43;CL:0002166!1.49e-08!3;CL:0000223!6.90e-08!59;CL:0002251!3.47e-07!21 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.32e-09,253;CL:0000076,1.80e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.84e-09;5!UBERON:0008814;9.96e-07;2!UBERON:0010056;9.96e-07;2 | |||
|ontology_enrichment_disease=DOID:305!3.61e-12!106;DOID:0050687!8.38e-10!143;DOID:1749!7.08e-09!14;DOID:162!4.54e-08!235;DOID:14566!1.03e-07!239 | |ontology_enrichment_disease=DOID:305!3.61e-12!106;DOID:0050687!8.38e-10!143;DOID:1749!7.08e-09!14;DOID:162!4.54e-08!235;DOID:14566!1.03e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:4556;6.10e-15;3!DOID:3112;2.63e-12;1!DOID:1749;3.35e-12;14!DOID:3111;5.05e-12;1!DOID:3603;5.05e-12;1!DOID:3908;2.47e-09;5!DOID:299;3.99e-07;25!DOID:1324;8.72e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.34e-17,106;DOID:4556,6.54e-15,3;DOID:0050687,2.42e-14,143;DOID:3112,2.63e-12,1;DOID:1749,3.50e-12,14;DOID:3111,5.05e-12,1;DOID:3603,5.05e-12,1;DOID:162,5.13e-12,235;DOID:14566,1.03e-11,239;DOID:3908,2.57e-09,5;DOID:299,3.99e-07,25;DOID:1324,8.64e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0005911!1.72e-09!82;UBERON:0002369!1.91e-09!3;UBERON:0001235!1.91e-09!3;UBERON:0006858!1.91e-09!3;UBERON:0005157!1.27e-08!51;UBERON:0004119!3.09e-08!169;UBERON:0000925!3.09e-08!169;UBERON:0006595!3.09e-08!169;UBERON:0003929!9.40e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;2.70e-15;3!UBERON:0001235;2.70e-15;3!UBERON:0006858;2.70e-15;3!UBERON:0002046;1.84e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.60e-15,3;UBERON:0001235,2.60e-15,3;UBERON:0006858,2.60e-15,3;UBERON:0002046,1.76e-09,5;UBERON:0004117,1.76e-09,5;UBERON:0007689,1.76e-09,5;UBERON:0007123,1.76e-09,5;UBERON:0003091,1.76e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0.860413786167011,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0,0,0,0.100528972411631,0.925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0.718874566474748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.85931808771448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,1.89110145414349,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,6.20284671004761,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,3.46686682532847,0.520679215005393,0.0979923974143777,2.08942095792966,0,0.687944129886466,0,0,0,0,0,0,0,0,0,0,1.60317640503067,0,0.39961921916426,0,6.07043959679353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,3.06240975906279,0,3.45447355175002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,4.71771501024837,2.3489486276869,0,0,0.734210113519403,0,0.926404341482917,0.438568099157414,0,0.964570191354574,0,0,4.14516410077438,0,0,0,0,0,0,0,5.07149096060705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,7.74021963207266,0,0,0,0,0,0,0,11.3002623081967,0.295712172434091,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,6.97343661215412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,1.1218771271618,0,0,0,0,0,0,0,0,0,0,0,2.35476911419288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0.860413786167011,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0,0,0,0.100528972411631,0.925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0.718874566474748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.85931808771448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,1.89110145414349,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,6.20284671004761,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,3.46686682532847,0.520679215005393,0.0979923974143777,2.08942095792966,0,0.687944129886466,0,0,0,0,0,0,0,0,0,0,1.60317640503067,0,0.39961921916426,0,6.07043959679353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,3.06240975906279,0,3.45447355175002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,4.71771501024837,2.3489486276869,0,0,0.734210113519403,0,0.926404341482917,0.438568099157414,0,0.964570191354574,0,0,4.14516410077438,0,0,0,0,0,0,0,5.07149096060705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,7.74021963207266,0,0,0,0,0,0,0,11.3002623081967,0.295712172434091,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,6.97343661215412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,1.1218771271618,0,0,0,0,0,0,0,0,0,0,0,2.35476911419288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@SFTA1P | |short_description=p6@SFTA1P | ||
}} | }} |
Latest revision as of 06:23, 16 September 2015
Short description: | p6@SFTA1P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SFTA1P_5end |
Coexpression cluster: | C1562_papillary_mesothelioma_oral_mucinous_Multipotent_Smooth_endometrial |
Association with transcript: | 138bp_to_ENST00000446372, NR_027082, uc001ikf.1_5end |
EntrezGene: | SFTA1P |
HGNC: | 18383 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.32e-09 | 253 |
squamous epithelial cell | 1.80e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 2.60e-15 | 3 |
adrenal cortex | 2.60e-15 | 3 |
adrenal/interrenal gland | 2.60e-15 | 3 |
thyroid gland | 1.76e-09 | 5 |
pharyngeal pouch | 1.76e-09 | 5 |
thyroid diverticulum | 1.76e-09 | 5 |
pharyngeal pouch 2 | 1.76e-09 | 5 |
thyroid primordium | 1.76e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.34e-17 | 106 |
lung large cell carcinoma | 6.54e-15 | 3 |
cell type cancer | 2.42e-14 | 143 |
papillary adenocarcinoma | 2.63e-12 | 1 |
squamous cell carcinoma | 3.50e-12 | 14 |
cystadenocarcinoma | 5.05e-12 | 1 |
mucinous cystadenocarcinoma | 5.05e-12 | 1 |
cancer | 5.13e-12 | 235 |
disease of cellular proliferation | 1.03e-11 | 239 |
non-small cell lung carcinoma | 2.57e-09 | 5 |
adenocarcinoma | 3.99e-07 | 25 |
lung cancer | 8.64e-07 | 15 |