FFCP PHASE1:Hg19::chr4:155506931..155506942,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2243 | |EntrezGene=2243 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3661 | |HGNC=3661 | ||
|TSSclassifier=strong | |||
|UniProt=P02671 | |UniProt=P02671 | ||
|association_with_transcript=-163bp_to_M26878_5end | |association_with_transcript=-163bp_to_M26878_5end | ||
|cluster_id=chr4:155506931..155506942,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_FGA_5end | |description=CAGE_peak_5_at_FGA_5end | ||
|id=chr4:155506931..155506942,- | |id=chr4:155506931..155506942,- | ||
|ontology_enrichment_celltype=CL:0000181!1.25e-45!12;CL:0000417!1.25e-45!12;CL:0000668!1.25e-45!12;CL:0000414!1.25e-45!12;CL:0000412!1.25e-45!12;CL:0000182!1.25e-45!12;CL:0000223!2.82e-12!59 | |ontology_enrichment_celltype=CL:0000181!1.25e-45!12;CL:0000417!1.25e-45!12;CL:0000668!1.25e-45!12;CL:0000414!1.25e-45!12;CL:0000412!1.25e-45!12;CL:0000182!1.25e-45!12;CL:0000223!2.82e-12!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.42e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.42e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.83e-11;11!UBERON:0009497;1.08e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.73e-51!19;UBERON:0006925!6.73e-51!19;UBERON:0008836!6.73e-51!19;UBERON:0008835!6.58e-44!22;UBERON:0003894!6.58e-44!22;UBERON:0009854!5.55e-42!23;UBERON:0007499!1.36e-38!25;UBERON:0009497!1.36e-38!25;UBERON:0000015!1.36e-38!25;UBERON:0002423!1.36e-38!25;UBERON:0006235!1.36e-38!25;UBERON:0004161!1.36e-38!25;UBERON:0005057!4.31e-37!26;UBERON:0009856!4.31e-37!26;UBERON:0002365!4.87e-31!31;UBERON:0002330!4.87e-31!31;UBERON:0002368!1.94e-27!35;UBERON:0000949!8.44e-27!45;UBERON:0003929!3.45e-22!54;UBERON:0005172!9.20e-22!55;UBERON:0005173!9.20e-22!55;UBERON:0002417!1.49e-19!61;UBERON:0000916!1.49e-19!61;UBERON:0002530!4.67e-16!59;UBERON:0005911!2.32e-14!82;UBERON:0005177!2.15e-13!107;UBERON:0001041!6.63e-12!98;UBERON:0004921!7.35e-11!129;UBERON:0004185!7.35e-11!129;UBERON:0009569!3.42e-10!113;UBERON:0000466!4.53e-09!126;UBERON:0001007!6.98e-09!155;UBERON:0001555!6.98e-09!155;UBERON:0007026!6.98e-09!155;UBERON:0000077!9.17e-09!130;UBERON:0000490!3.42e-08!138;UBERON:0004119!4.59e-08!169;UBERON:0000925!4.59e-08!169;UBERON:0006595!4.59e-08!169;UBERON:0002405!7.72e-08!115;UBERON:0003914!1.08e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.65e-37;19!UBERON:0006925;1.65e-37;19!UBERON:0002423;1.20e-28;25!UBERON:0002365;3.93e-23;31!UBERON:0002330;3.93e-23;31!UBERON:0002368;5.28e-20;33!UBERON:0000949;1.70e-14;43!UBERON:0005172;1.89e-10;52!UBERON:0005173;1.89e-10;52!UBERON:0002417;4.33e-08;58!UBERON:0000916;4.33e-08;58!UBERON:0002530;1.24e-07;57!UBERON:0001007;1.68e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.65e-37,19;UBERON:0006925,1.65e-37,19;UBERON:0008836,1.65e-37,19;UBERON:0008835,1.78e-32,22;UBERON:0003894,1.78e-32,22;UBERON:0009854,4.34e-31,23;UBERON:0007499,1.20e-28,25;UBERON:0009497,1.20e-28,25;UBERON:0000015,1.20e-28,25;UBERON:0002423,1.20e-28,25;UBERON:0006235,1.20e-28,25;UBERON:0004161,1.20e-28,25;UBERON:0009856,1.45e-27,26;UBERON:0002365,3.34e-23,31;UBERON:0002330,3.34e-23,31;UBERON:0002368,1.32e-20,35;UBERON:0000949,3.99e-16,45;UBERON:0003929,1.67e-13,54;UBERON:0005172,1.67e-13,54;UBERON:0005173,1.67e-13,54;UBERON:0002530,2.17e-12,59;UBERON:0002417,3.45e-12,60;UBERON:0000916,3.45e-12,60;UBERON:0005911,5.32e-09,82;UBERON:0001041,1.69e-08,87;UBERON:0005177,2.36e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,96.3338264645915,107.128166617861,34.2658145875214,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.787831823072237,0.494495150286999,0.404421263125109,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4138501719452,14.5757577803443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,96.3338264645915,107.128166617861,34.2658145875214,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.787831823072237,0.494495150286999,0.404421263125109,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4138501719452,14.5757577803443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@FGA | |short_description=p5@FGA | ||
}} | }} |
Latest revision as of 06:51, 16 September 2015
Short description: | p5@FGA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FGA_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -163bp_to_M26878_5end |
EntrezGene: | FGA |
HGNC: | 3661 |
UniProt: | P02671 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.42e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.65e-37 | 19 |
digestive gland | 1.65e-37 | 19 |
liver bud | 1.65e-37 | 19 |
hepatic diverticulum | 1.78e-32 | 22 |
liver primordium | 1.78e-32 | 22 |
digestive tract diverticulum | 4.34e-31 | 23 |
epithelial sac | 1.20e-28 | 25 |
epithelium of foregut-midgut junction | 1.20e-28 | 25 |
anatomical boundary | 1.20e-28 | 25 |
hepatobiliary system | 1.20e-28 | 25 |
foregut-midgut junction | 1.20e-28 | 25 |
septum transversum | 1.20e-28 | 25 |
sac | 1.45e-27 | 26 |
exocrine gland | 3.34e-23 | 31 |
exocrine system | 3.34e-23 | 31 |
endocrine gland | 1.32e-20 | 35 |
endocrine system | 3.99e-16 | 45 |
gut epithelium | 1.67e-13 | 54 |
abdomen element | 1.67e-13 | 54 |
abdominal segment element | 1.67e-13 | 54 |
gland | 2.17e-12 | 59 |
abdominal segment of trunk | 3.45e-12 | 60 |
abdomen | 3.45e-12 | 60 |
endo-epithelium | 5.32e-09 | 82 |
foregut | 1.69e-08 | 87 |
trunk region element | 2.36e-07 | 101 |