FFCP PHASE1:Hg19::chr4:155511887..155511903,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2243 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3661 | |||
|TSSclassifier=strong | |||
|UniProt=Q6NSD8,P02671 | |||
|association_with_transcript=0bp_to_ENST00000457487,NM_000508,NM_021871,uc003iod.1,uc003ioe.1,uc003iof.1_5end | |||
|cluster_id=chr4:155511887..155511903,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_FGA_5end | |||
|id=chr4:155511887..155511903,- | |||
|ontology_enrichment_celltype=CL:0000181!3.30e-13!12;CL:0000417!3.30e-13!12;CL:0000668!3.30e-13!12;CL:0000414!3.30e-13!12;CL:0000412!3.30e-13!12;CL:0000182!3.30e-13!12;CL:0002322!4.81e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.24e-20;12!CL:0000650;7.57e-08;2!CL:1000500;7.57e-08;2!CL:1000618;7.57e-08;2!CL:1001318;7.57e-08;2!CL:0002173;7.57e-08;2!CL:0002322;1.71e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.10e-20,12;CL:0000650,7.57e-08,2;CL:1000500,7.57e-08,2;CL:1000618,7.57e-08,2;CL:1001318,7.57e-08,2;CL:0002173,7.57e-08,2;CL:0002322,1.67e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.73e-18;31!UBERON:0004161;4.52e-17;11!UBERON:0009497;2.80e-14;13!UBERON:0001041;4.12e-11;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.42e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.42e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0009854!3.08e-21!23;UBERON:0008835!1.55e-19!22;UBERON:0003894!1.55e-19!22;UBERON:0009856!2.64e-18!26;UBERON:0002107!1.99e-17!19;UBERON:0006925!1.99e-17!19;UBERON:0008836!1.99e-17!19;UBERON:0007499!9.91e-17!25;UBERON:0009497!9.91e-17!25;UBERON:0000015!9.91e-17!25;UBERON:0002423!9.91e-17!25;UBERON:0006235!9.91e-17!25;UBERON:0004161!9.91e-17!25;UBERON:0005057!1.91e-16!26;UBERON:0005172!4.98e-16!55;UBERON:0005173!4.98e-16!55;UBERON:0005177!1.03e-15!107;UBERON:0002368!1.63e-14!35;UBERON:0002417!7.53e-14!61;UBERON:0000916!7.53e-14!61;UBERON:0004921!1.46e-13!129;UBERON:0004185!1.46e-13!129;UBERON:0003929!2.25e-13!54;UBERON:0000466!1.41e-12!126;UBERON:0005911!4.03e-12!82;UBERON:0000949!6.68e-12!45;UBERON:0000077!1.93e-11!130;UBERON:0001007!2.10e-11!155;UBERON:0001555!2.10e-11!155;UBERON:0007026!2.10e-11!155;UBERON:0004119!2.95e-11!169;UBERON:0000925!2.95e-11!169;UBERON:0006595!2.95e-11!169;UBERON:0009569!3.05e-11!113;UBERON:0002365!4.30e-11!31;UBERON:0002330!4.30e-11!31;UBERON:0001041!6.13e-10!98;UBERON:0000025!3.32e-09!194;UBERON:0002530!3.94e-09!59;UBERON:0007023!4.76e-09!115;UBERON:0000481!7.26e-09!347;UBERON:0003104!5.44e-08!238;UBERON:0009142!5.44e-08!238;UBERON:0004111!3.39e-07!241;UBERON:0003914!9.22e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.53e-23;19!UBERON:0006925;1.53e-23;19!UBERON:0002423;2.69e-17;25!UBERON:0002368;1.94e-15;33!UBERON:0002365;2.99e-13;31!UBERON:0002330;2.99e-13;31!UBERON:0005172;2.23e-12;52!UBERON:0005173;2.23e-12;52!UBERON:0000922;7.09e-12;49!UBERON:0000949;1.05e-10;43!UBERON:0002417;2.72e-08;58!UBERON:0000916;2.72e-08;58!UBERON:0003567;7.57e-08;2!UBERON:0003838;7.57e-08;2!UBERON:0003586;7.57e-08;2!UBERON:0005169;7.57e-08;2!UBERON:0002321;7.57e-08;2!UBERON:0005215;7.57e-08;2!UBERON:0002303;7.57e-08;2!UBERON:0002319;7.57e-08;2!UBERON:0005409;4.22e-07;22!UBERON:0001007;4.93e-07;81!UBERON:0000160;5.64e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.45e-23,19;UBERON:0006925,1.45e-23,19;UBERON:0008836,1.45e-23,19;UBERON:0008835,5.17e-20,22;UBERON:0003894,5.17e-20,22;UBERON:0005172,4.40e-19,54;UBERON:0005173,4.40e-19,54;UBERON:0009854,4.91e-19,23;UBERON:0007499,2.58e-17,25;UBERON:0009497,2.58e-17,25;UBERON:0000015,2.58e-17,25;UBERON:0002423,2.58e-17,25;UBERON:0006235,2.58e-17,25;UBERON:0004161,2.58e-17,25;UBERON:0002417,1.00e-16,60;UBERON:0000916,1.00e-16,60;UBERON:0009856,1.49e-16,26;UBERON:0002368,3.07e-16,35;UBERON:0003929,5.75e-15,54;UBERON:0005177,1.79e-14,101;UBERON:0004921,4.59e-14,118;UBERON:0000949,5.19e-14,45;UBERON:0002365,1.72e-13,31;UBERON:0002330,1.72e-13,31;UBERON:0005911,1.44e-12,82;UBERON:0001007,2.13e-11,145;UBERON:0001555,2.13e-11,145;UBERON:0007026,2.13e-11,145;UBERON:0009569,3.23e-11,112;UBERON:0004119,9.38e-11,160;UBERON:0000925,9.38e-11,160;UBERON:0006595,9.38e-11,160;UBERON:0001041,4.01e-10,87;UBERON:0002530,6.03e-10,59;UBERON:0005409,4.43e-08,25;UBERON:0011216,6.20e-08,223;UBERON:0003567,7.57e-08,2;UBERON:0003838,7.57e-08,2;UBERON:0003586,7.57e-08,2;UBERON:0005169,7.57e-08,2;UBERON:0002321,7.57e-08,2;UBERON:0005215,7.57e-08,2;UBERON:0002303,7.57e-08,2;UBERON:0002319,7.57e-08,2;UBERON:0000160,5.61e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0751124186843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,18.2424490305144,21.8724826082432,13.8776467981596,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2282384192618,0,54453.9629594585,54826.0334551447,41824.97144351,0,395.284841477567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,210.537161188606,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,1.89662506280697,1.00337954770971,0,0,0,0,0,0,0,0,6477.77623824571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6336.06607987879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0.828851746593443,0,0,0,0,0.0898683511473268,0.537063524026827,0,0.295930216910801,0,0,106.626602070474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.33702667383415,0,1.06606955203727,0,0,0,0,0,0,0,0,0.632994193584081,0.489698424477443,58.8028777165194,0,0,0,1.83309043480088,0,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,0,0,0,4.83962864194656,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54289337429278,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64565229633883,0,7.98716001995964,13.7352335403703,0,1.88113722962834,0,88.5369216408649,592.843446861858,554.576311046869,558.438360831922,2.75596948241297,0,0,0,0,0,0,0,0,0,0,112.692161437853,27.748477123414,0,0.896436696664224,0,0,0.662091970365432,0,0,0,0,0,0,0,0,74695.7683266808,15487.4051760604,0,0,88.4518951861983,0,6.30045734149399,1.57204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17337410294842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,55.4874947975496,0,0,0,2.22874029240702,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,4.96733272910777,0,0,0,0,0,0,0,0,0,4.56579360254748,9.0689588311821,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,2.3196288626764,0.971421986118279,0,0,0,0,0,0,0,86.5495859595671,0,0,0,0,0,3.3812458206672,0,0,120.794082062484,0,0,0,0,6.57302749421866,0,0,0,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0,1.07185652062471,0,0,0,0,0,2.79336214331361,0,2.67318064768293,0.404234377916439,0,0,0,1.79305513481691,0.99798106963804,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p1@FGA | |||
}} |
Latest revision as of 07:11, 16 September 2015
Short description: | p1@FGA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FGA_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000457487, NM_000508, NM_021871, uc003iod.1, uc003ioe.1, uc003iof.1_5end |
EntrezGene: | FGA |
HGNC: | 3661 |
UniProt: | Q6NSD8P02671 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.10e-20 | 12 |
mesangial cell | 7.57e-08 | 2 |
kidney interstitial cell | 7.57e-08 | 2 |
juxtaglomerular complex cell | 7.57e-08 | 2 |
renal interstitial pericyte | 7.57e-08 | 2 |
extraglomerular mesangial cell | 7.57e-08 | 2 |
embryonic stem cell | 1.67e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.42e-08 | 2 |